mRNA_Ecto-sp13_S_contig6325.17070.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: D7G596_ECTSI (Putative DP transcription factor n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G596_ECTSI) HSP 1 Score: 742 bits (1916), Expect = 1.540e-266 Identity = 447/461 (96.96%), Postives = 450/461 (97.61%), Query Frame = 1
Query: 40 MESLMFPGDATSPMPSFGLWDEIEDNGKFSSLKRKHDDTLSDELLTMLKDAGLENMALEVGTVQGGQIAALQDGKEGGLGSAAKMLRPFAAAGDATSPVAMTASAIFSPNPRGTAPPLDSPLLLKRSLGSPAXXXXXXXXXXXXXXXGGHRGGVGGGALSHLTESPAAIKGTDLRQAASAESDSPPKSKPKKSRRTLPPATAAXXXXXXXXXXXXXXXPAGRTRRACTNYGADAPSDTALQTKRAKKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 1422
MESLMFPGDATSP PSFGLWDEIEDNGKFSSLKRKHDDTLSDELLTMLKDAGLENMALEVGTVQGGQIAALQDGK+GGLGSAAKMLRPFAAAGDATSPVAMTASAIFSPNPRGTAPPLDSPLLLKRSLGSPAXXXXXXXXXXXXXXX HR GVGGGALSHLTESPAAIKGTDLRQAASAESDSPPKSK KKSRRTLPPATA XXXXXXXXXXXXXXXPAGRTRRACT+YGADAPSDTALQTKR KKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLP+NSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRS XXXXXXXXXXXXXX AECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL
Sbjct: 1 MESLMFPGDATSPTPSFGLWDEIEDNGKFSSLKRKHDDTLSDELLTMLKDAGLENMALEVGTVQGGQIAALQDGKDGGLGSAAKMLRPFAAAGDATSPVAMTASAIFSPNPRGTAPPLDSPLLLKRSLGSPAXXXXXXXXXXXXXXXXXHRVGVGGGALSHLTESPAAIKGTDLRQAASAESDSPPKSKSKKSRRTLPPATAXXXXXXXXXXXXXXXXPAGRTRRACTHYGADAPSDTALQTKRTKKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSRAXXXXXXXXXXXXXXNGAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 461
BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A7S0P3J9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P3J9_9EUKA) HSP 1 Score: 197 bits (501), Expect = 1.430e-54 Identity = 114/211 (54.03%), Postives = 145/211 (68.72%), Query Frame = 1
Query: 796 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAA--EGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 1422
+KGLRHFS+KVC KVE+KG TTYNEVADELV E AA E + + + YD+KNIRRRVYDALNVLMA+DII+K++K I W+GLP N+ + G R LQ + R+ LD K+ L +LL QQISF+NL RRNRS A A+ Q A +I +PFI+VSS ++TVI CEMAE+++++FFNFS F+I DDNEIL
Sbjct: 177 DKGLRHFSMKVCEKVEQKGRTTYNEVADELVNEFAAVAETSMMSEVDQQYDEKNIRRRVYDALNVLMAMDIITKEKKNIMWRGLPANTQQEGAR-LQMDLASRKERLDKKRLHLQELLTQQISFKNLIRRNRSPAS---------------ASTAQAQ------ADRIPLPFIIVSSRNETVIDCEMAEDKQEIFFNFSAPFEIHDDNEIL 365
BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A7S3WVG7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WVG7_9SPIT) HSP 1 Score: 194 bits (493), Expect = 2.250e-54 Identity = 107/213 (50.23%), Postives = 144/213 (67.61%), Query Frame = 1
Query: 796 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGK----EPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 1422
+KGLRHFS+KVC KVE+KG TTYNEVADELVQE G +G G E YD+KNIRRRVYDALNVLMA+DII+K++K+I W+GLP N+ + G R +Q + RE L+ K+ L +LL QQISF+NL +RN+ + + + ++ A +I +PFI+V+S +TVI CEMAE+++++FFNFS F+I DDNE L
Sbjct: 61 DKGLRHFSMKVCEKVEQKGRTTYNEVADELVQEFVNAGMVGGGDGEDGETQYDEKNIRRRVYDALNVLMAMDIITKEKKQILWRGLPTNTQQEGTR-MQMDIASREERLNKKRLHLQELLTQQISFKNLIKRNQMRGGSGSTDHARSMANGA-SSVTDPRSSDVANADRIPLPFIIVNSGKETVIDCEMAEDKQEIFFNFSAPFEIHDDNETL 271
BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A7S0L8F0_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L8F0_9EUKA) HSP 1 Score: 194 bits (494), Expect = 2.350e-53 Identity = 113/211 (53.55%), Postives = 143/211 (67.77%), Query Frame = 1
Query: 796 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAA--EGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 1422
+KGLRHFS+KVC KVE+KG TTYNEVADELV E AA E + + + YD+KNIRRRVYDALNVLMA+DII+K++K I W+GLP N+ + G R LQ + R+ LD K+ L +LL QQISF+NL +RNRS A A Q KI +PFI+VSS ++TVI CEMAE+++++FFNFS F+I DDNEIL
Sbjct: 182 DKGLRHFSMKVCEKVEQKGRTTYNEVADELVAEFAAVAESAMMSEVDQQYDEKNIRRRVYDALNVLMAMDIITKEKKNIMWRGLPANTQQEGAR-LQMDLSSRKERLDKKRLHLQELLTQQISFKNLIQRNRSP-----------------AAAATTQ------GDKIPLPFIIVSSRNETVIDCEMAEDKQEIFFNFSAPFEIHDDNEIL 368
BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A2D4C957_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C957_PYTIN) HSP 1 Score: 193 bits (491), Expect = 3.310e-53 Identity = 112/217 (51.61%), Postives = 146/217 (67.28%), Query Frame = 1
Query: 775 KKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVA-ASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 1422
K+ + K NKGLRHFS++VC+KVEEK TTYNEVADELV+E T YD+KNIRRRVYDALNVLMA+DIISK+RKEI+W+GLP N L E+ +R +S++ KK L DLLVQQ++ +NL +RN A+ +E + + +IF+PFIVV++S DTVIQCEM+E+R+D+FFNFS+ F+I DD EIL
Sbjct: 183 KRKQLKINKGLRHFSLRVCQKVEEKNVTTYNEVADELVREFVTMRPNDTA----YDEKNIRRRVYDALNVLMALDIISKERKEIRWRGLPTNLQHDA-EMLIAERNERVKSVEQKKQHLQDLLVQQVAMKNLLKRN--------------------AKRRKESTLDALRDEGRIFLPFIVVNTSKDTVIQCEMSEDRQDIFFNFSNPFEINDDTEIL 374
BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: W4FM68_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FM68_9STRA) HSP 1 Score: 192 bits (489), Expect = 7.300e-53 Identity = 111/232 (47.84%), Postives = 150/232 (64.66%), Query Frame = 1
Query: 727 YGADAPSDTALQTKRAKKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 1422
+GA P ++ K +KGLRHFS+KVC+KVEEK TTYNEVADELV E + + +YD+KNIRRRVYDALNVLMA+DIISK++KEI+W+GLP N+ + L LQ E R +S++ KK QL +LL+QQI+ +NL +RN+ Q + A +I +PFI+V++S DT+IQCEM+E+R+D+FFNFS F+I DD+EIL
Sbjct: 182 HGASTPKKKKPRSTSTTPVSDKGSKGLRHFSMKVCQKVEEKHVTTYNEVADELVHEFVT---MRPAESVNYDEKNIRRRVYDALNVLMAMDIISKEKKEIRWRGLPSNAKQD-LELLQMENAQRAKSVEQKKQQLQELLLQQIALKNLIQRNK-------------------------QVDKPSALCRISLPFILVNTSKDTIIQCEMSEDRQDIFFNFSGPFEINDDSEIL 384
BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A3F2S1S5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1S5_9STRA) HSP 1 Score: 187 bits (475), Expect = 7.490e-53 Identity = 108/212 (50.94%), Postives = 138/212 (65.09%), Query Frame = 1
Query: 796 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAA---SKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 1422
NKGLRHFS+KVC+KVEEK T+YNEVADELV+E + YD+KNIRRRVYDALNVLMA+DIISK+RKEI+WKGLP N L E+ +R +S++ KK L DLLVQQ++ +NL +RN E +AA ++F+PFI V++S DTVIQCEM+E+R+D+FFNFS F+I DD +IL
Sbjct: 18 NKGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMRP----NDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHD-TEMLLAERNERMKSVEQKKQHLQDLLVQQVAMKNLLKRNAERK-----------------RLESENPVSAIAARDEGRVFLPFIAVNTSKDTVIQCEMSEDRQDIFFNFSAPFEIHDDADIL 207
BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: K3WUL3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUL3_GLOUD) HSP 1 Score: 192 bits (487), Expect = 1.460e-52 Identity = 109/209 (52.15%), Postives = 140/209 (66.99%), Query Frame = 1
Query: 796 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 1422
NKGLRHFS+KVC+KVEEK T+YNEVADELV+E + YD+KNIRRRVYDALNVLMA+DIISK+RKEI+WKGLP N L E+ +R +SL+ KK L DLLVQQ++ +NL +RN + E + ++ +IF+PFIVV+++ DTVIQCEM+E+R+D+FFNFS F+I DD EIL
Sbjct: 190 NKGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTMRP----NDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHD-TEMLIAERNERRKSLEQKKQHLQDLLVQQVAMKNLLKRNAARRKAE-------------TELSVASESGHGDEGRIFLPFIVVNTAKDTVIQCEMSEDRQDIFFNFSAPFEINDDTEIL 380
BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A8K1CI48_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI48_PYTOL) HSP 1 Score: 190 bits (483), Expect = 2.320e-52 Identity = 110/209 (52.63%), Postives = 140/209 (66.99%), Query Frame = 1
Query: 796 NKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 1422
NKGLRHFS+KVC KVEEK TTYNEVADELV+E +G YD+KNIRRRVYDALNVLMA+DIISK+RKEI+WKGLP N L E+ +R +S++ K+ L DLLVQQ++ +NL +RN E + +E +IF+PFIVV+++ DTVIQCEM+E+R+D+FFNFS+ F+I DD EIL
Sbjct: 160 NKGLRHFSMKVCEKVEEKNVTTYNEVADELVREFVTLRPNDSG----YDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPTNLQHDA-EMLIAERNERMKSVEQKRQHLQDLLVQQVAMKNLLKRNTKRRK----------------ENGTDTLRDE---GRIFLPFIVVNTNKDTVIQCEMSEDRQDIFFNFSNPFEINDDTEIL 344
BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Match: A0A7S2RBZ6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RBZ6_9STRA) HSP 1 Score: 188 bits (477), Expect = 3.710e-52 Identity = 112/221 (50.68%), Postives = 144/221 (65.16%), Query Frame = 1
Query: 772 AKKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLG----TGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPQNSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSXXXXXXXXXXXXXXXXXXAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEIL 1422
A K AK NKGLRHFS++VC+KVEEKG T+YNEVADELV+E A+ + T K+ YD+KNIRRRVYDALNVLMA+DI+SK++KEI+WKGLP ++ + L L +E+ R + K+ L DLLVQ + FRNL RRN+S + + I +PFIVV++S+D VIQCEMA +R DV F+FS F+I DDNEIL
Sbjct: 38 APKSNAKANKGLRHFSMRVCKKVEEKGHTSYNEVADELVKEFVAQRQEDQQPDTKKKKTYDEKNIRRRVYDALNVLMAMDIVSKEKKEIRWKGLPSHTH-ADLEMLHRERAHRLAEVQRKRECLQDLLVQNVCFRNLVRRNQS---------------------------QPPPSEPIPLPFIVVNTSNDAVIQCEMAPDRSDVMFDFSMPFEINDDNEIL 230 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6325.17070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6325.17070.1 >prot_Ecto-sp13_S_contig6325.17070.1 ID=prot_Ecto-sp13_S_contig6325.17070.1|Name=mRNA_Ecto-sp13_S_contig6325.17070.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=474bp MTTKTRDRGQGEEMESLMFPGDATSPMPSFGLWDEIEDNGKFSSLKRKHDback to top mRNA from alignment at Ecto-sp13_S_contig6325:1..6075- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6325.17070.1 ID=mRNA_Ecto-sp13_S_contig6325.17070.1|Name=mRNA_Ecto-sp13_S_contig6325.17070.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6075bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6325:1..6075- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6325:1..6075- >mRNA_Ecto-sp13_S_contig6325.17070.1 ID=mRNA_Ecto-sp13_S_contig6325.17070.1|Name=mRNA_Ecto-sp13_S_contig6325.17070.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1422bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6325:1..6075- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |