mRNA_Ecto-sp13_S_contig6322.17067.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6322.17067.1
Unique NamemRNA_Ecto-sp13_S_contig6322.17067.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: D7FSF7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF7_ECTSI)

HSP 1 Score: 585 bits (1507), Expect = 4.250e-205
Identity = 293/303 (96.70%), Postives = 299/303 (98.68%), Query Frame = 1
Query:  151 MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPASTNYTQFICYDEVYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVMVAF 1059
            MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPA+TNYTQFICYDEVYP IF+NETGEVDI+EAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVS LVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMF GMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMK+++ F
Sbjct:    1 MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPATTNYTQFICYDEVYPEIFNNETGEVDIQEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSVLVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMF-GMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKLLILF 302          
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A7S3Y650_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y650_HETAK)

HSP 1 Score: 296 bits (759), Expect = 1.080e-91
Identity = 166/358 (46.37%), Postives = 236/358 (65.92%), Query Frame = 1
Query:    1 MGYALSEKDKENPDNEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGN-------GVCVEECPASTNYTQFICYDEVYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDV-SESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVM 1050
            M Y L++KD+ +P N+ L+G  DF    C   EK      RKCTDILFLL+L A W AMT LGF+V G+IPND LEPGNP+RL+NGIDY G ICGV + V ++  IY+LPS +       GVCV+ CP+  + TQF+C +      FD+    +++ +AW  V  G C+YH ATT+I +YCV+D+ +     AA+ A++  +A+ALN +  N T +S +  S+S+WF++  AD++TA+ +I GFG+GV+ +VG  YL FLRIPGVLF+L WG++  +  +L  A V+   T+ +W A E P+IHSD E     Y SY +F  +  +W LL+L  RKRI++A+ ITK+ASRAV  MK++
Sbjct:    1 MVYELNDKDRNDPANKKLEGGADFPG-PC---EK------RKCTDILFLLLLIACWVAMTFLGFVVCGVIPNDNLEPGNPQRLINGIDYNGHICGVDSAVSDKSKIYYLPSVSTNSYGAIGVCVDSCPSERDLTQFVC-NYTIDSTFDSSDA-LEMAQAWRYVLQGQCMYHEATTDIFNYCVYDAALS----AASAAIDQVVASALNVSADNVTGLSYETDSDSSWFDNFTADLMTAKYVILGFGVGVAMVVGFIYLFFLRIPGVLFMLTWGIIGAITLVLLLAAVLCYTTATSW-ASESPQIHSDTEAKGLLYFSYALFV-VFGLWLLLILVLRKRIQLALRITKQASRAVAAMKLL 340          
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A835Z9G9_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G9_9STRA)

HSP 1 Score: 289 bits (739), Expect = 3.670e-89
Identity = 148/353 (41.93%), Postives = 216/353 (61.19%), Query Frame = 1
Query:    7 YALSEKDKENPDNEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPASTNYTQFICYDE--VYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVMVAF 1059
            Y LSE+DK NP N  L+GSP FK              +R+CTD+LF L+L A+WAAMT LG +V G+I +   E GNPKRL+NGID +G ICGV   V + +  Y +PSG GVCV  CP   NY +F C ++  +   +++      + E AW  V+ GDC+Y+ A+T++ +YCVFD+ I   +  A        A+A  G +    V+    + ++W  D+ AD++ ++ L+ G  LG SAL+   Y+  +R+P +LFLL+W    G+ A+  GAG++L+ T++ W  E EP+ HSD E  A  Y SY++FA +  +WALL+LW RKRI  AI +TKEA+RAVN M +++ F
Sbjct:    4 YELSERDKNNPHNAKLEGSPAFKV-----------GEHRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAVADLDKFYPVPSGTGVCVASCPKEDNYERFYCINDTTIEAAVYNPGNDTFNAEVAWQYVAQGDCMYYAASTDLFNYCVFDAAISAMNTTA--------ASAAAGGSVGAPVMLPLTNSASWLTDLAADLIASKALVLGISLGGSALLAFIYICLMRVPALLFLLVWACALGILAVFIGAGLVLMDTAQAWDGEPEPQTHSDSEAKALLYFSYVLFA-LGGLWALLLLWLRKRINTAICVTKEAARAVNSMPLLLFF 336          
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A7S3Y6D2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6D2_HETAK)

HSP 1 Score: 286 bits (732), Expect = 2.400e-87
Identity = 159/354 (44.92%), Postives = 231/354 (65.25%), Query Frame = 1
Query:    7 YALSEKDKENPDNEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGN------GVCVEECPASTNYTQFICYDEVYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVM 1050
            Y +S+KDKE+PDN+ L+ S DF A  C   EK      RKCTDILFLL++ A W AMT LGF+VTG IP+D L+ GNP+RL+NGIDYEG ICGV + V+ +  IY+LP+        GVC++ CP++ + + FIC   V        + E+   E +  VS+G+C+Y   TT+I +YC++D+++D A+ AA   +E E+ ++ N ++AN ++ S D S+  WF+D  AD+ T + +I GFG+GV+ ++G  YL  LRIPGVLF+L WG++F +  +L   GV+   T+  W  +     H+  E N+ KY SY +FA +  VW LLML  RKRI++A+ ITKEAS+AV  MK++
Sbjct:   55 YEMSDKDKEHPDNKKLEHSADF-AGPC---EK------RKCTDILFLLLIIACWVAMTFLGFVVTGAIPSDTLDAGNPERLINGIDYEGNICGVDSGVKSKSKIYYLPAVGTTVSIAGVCIDSCPSTQDTSTFICKYNV--------SDELTTLEYYQEVSSGNCMYQEPTTDIFNYCIYDTLLDAAESAAYQTLE-EVMSSFNMSSANVSLSSDDSSD--WFDDFTADIYTGKYVIFGFGIGVALVIGFVYLFLLRIPGVLFMLTWGIIFSILFLLLIGGVLCYTTASDWADDSS---HTTTEANSLKYFSYFLFA-LTGVWLLLMLVLRKRIQLALKITKEASKAVASMKLL 383          
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A7S2Y2B5_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2B5_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.670e-78
Identity = 139/321 (43.30%), Postives = 205/321 (63.86%), Query Frame = 1
Query:  118 NRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPASTNYTQFICYDEVYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSES-------TWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVMVAF 1059
            NRKCTD+L +L+L A W A T+LGFIV G+I N+ LE GNP RL+NG+DY+GR+CG+ + V+  ENIY+LPSG G+C+E CP +T+Y QF C     PG    E  E D++ A+ +++AG C+YH+ATT++ +YC++D+V++ A +     +E  +A A NGT+    V + D+ ES        WF+D  AD+  A  +I GFG       G  YL+ LR+PGVLFL+ WG++F V  +    G + +Q  + W   E+   HSD E     Y  Y++ A + V++ L +L  RKRIK+A+ I KEAS+A++ MK++V F
Sbjct:    5 NRKCTDVLCMLLLIAVWFATTILGFIVCGVIENENLEAGNPWRLVNGVDYDGRVCGIDSGVKNEENIYYLPSGAGICIESCPTATDYKQFHCM----PG----EEPEDDLD-AYKKIAAGKCMYHVATTDVFNYCIYDAVLEAAQDVGAATLEQAIAAANNGTSD--AVAAGDIPESYFEPDEDNWFDDFTADLYKAIYVIFGFGXXXXXXXGFLYLILLRVPGVLFLMTWGIIFLVQLLWLVGGALCVQIGKAW---EDDNKHSDMESKGLLYFGYVLIA-IGVLFFLFILCMRKRIKLAVGIVKEASKAISAMKIIVLF 310          
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: B8C1T3_THAPS (Choline transporter-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1T3_THAPS)

HSP 1 Score: 179 bits (455), Expect = 6.810e-48
Identity = 113/325 (34.77%), Postives = 174/325 (53.54%), Query Frame = 1
Query:  121 RKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGV-------GTTVQERENIYFLPSGNGVCVEECPASTNYTQFICYDEVYPGIFDNETGEVDIEEAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDV-----SESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVMVAF 1059
            R CTD+LFLL+L  AW AMT +G   TGLI ++ ++ G+P+RL+NG+DY   ICGV       G  V      Y LPSG  VCVE CP+ TNY +F C  E      D    +  ++ A T  S   C+ ++ +T+ LSYC+ D                 + N     N  +T +S  +     S+S +F+ +  D+   R +I  FG G++ ++G  +L+ +++PG L LL+W ++  V A L GAG    +TS  W + E        E  A  Y SY+++ G+ V+W +++ + R+RI +AI   KE++RA++ M VM  F
Sbjct:    5 RTCTDVLFLLLLVCAWIAMTGVGLAATGLIKSEVIKKGDPRRLINGLDYHANICGVTNYQTPLGADVINLPKAYPLPSGYFVCVERCPSVTNYDEFHCEYETV----DITNTKKSLQIAHT--SQKQCMPYIKSTSFLSYCIPD-----------------IPNVTTSNNETHTEISITMEDQINSQSDFFDKLMTDVYNVRYVIFYFGCGMAMVLGIVFLVVIQLPGFLSLLVWTMIIAVDASLIGAGWYTKETSLKWASSET---RGGNEAVALFYASYVLY-GLAVLWVMIICYIRRRIVLAIYCVKESARAISAMPVMTLF 302          
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A8J2WZ97_9STRA (Choline transporter-like protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ97_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.190e-44
Identity = 123/385 (31.95%), Postives = 192/385 (49.87%), Query Frame = 1
Query:   16 SEKDKENPDNEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDG---LEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLPSGNGVCVEECPASTNYTQFICYD---EVYPGIFDNETG-EV-------DIEEAWTRVSAGD---------CLYHMATTNILSYCVFDSVIDLA----DEAATLAVEAE---------MANALNG-TNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVMVAF 1059
            +E DK++P+N+ L    DF     C+         RKCTD+L  L+L  AW  MT++G       P +G   L+ GNP +L+NGIDY+ R+CG+ + V++R  +Y+LP+G+GVC+++CP   N   F C D   E    I   +TG EV       ++ +        D         C  +  T ++++YCV +    +A    D+AA  A +A          +A A    T      ++++  E  + E ++ADM+ +   I GFG   +  VG  Y   LRIPGVL L++WG++  V         M  QTS  W  +E+       + N   YL+Y   A +C +WA  +   RKRI +AI ITKEA++ +  M +++ F
Sbjct:   23 TEDDKKDPNNKPLDVGKDFGGP--CK--------KRKCTDVLCTLLLAFAWFCMTVVGLACIPGSPIEGTMGLQKGNPYKLINGIDYKDRVCGIDSDVKDRLKLYYLPTGSGVCIKKCPEKQNAQAFHCTDDAQEKLDKIDRTQTGWEVLYVAKGFEMVKECNDPKCSDPQSLRRCQCCAPYYPTNDVMNYCVSEQAQAVAAAAGDQAAQQAADATKPCDPTPPPVAGATKAPTPLCGAALAAESQERDYTEKMYADMMVSMWYIFGFGFFGAIFVGFVYTFILRIPGVLALVVWGIIVAVGVFWLALAAMCYQTSVAWKQDED---RDANQANGMLYLAYFC-AALCALWACTICCLRKRIALAIGITKEAAKCIATMPIIIVF 393          
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A7S4T9X0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T9X0_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.100e-43
Identity = 108/304 (35.53%), Postives = 165/304 (54.28%), Query Frame = 1
Query:  175 MTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQER-ENI------YFLPSGNGVCVEECPASTNYTQFICYDEVYPGIFDNET---GEVDIEEAW-TRVSAG-------DCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAV 1032
            MT +GF VTG+I ++ L  GNP+RL+NG+DY G ICG+   V  R EN+      YFLPSG  +C+  CP   N+ +F C  E+   I        G   I+ A  T+ S G        C+ H+ TT  L YC  D  I++ +      +  + AN    T++N+T+V  +  + T+F+   AD  T+R +I GFGLG + ++G  +L+ ++ PGVL  ++W ++ G++  L GAG  + + S  W A+    I  D E+    +LS I +     +W + +   RKRI +AIA  KEASRA+
Sbjct:    1 MTGVGFAVTGVIESNTLNKGNPERLVNGMDYHGNICGISNYVTSRGENVMNLPKAYFLPSGLTICIPSCPMEKNFDKFYCQYEIQAEIEQRVAIVAGNAGIDAANNTQKSLGLYYTSTKQCMPHLKTTPYLGYCRPDVPIEVVEGD----LNQKFANESLHTSSNFTIVQEE-PKGTFFDKAMADAKTSRYVIFGFGLGAAMILGLIFLVLIQTPGVLTTMVWSIVIGIFIGLIGAGHYMSRKSAIWMAQG---IRDDREIIGLFWLSRISYVA-SGLWFVTICCLRKRIVLAIACVKEASRAM 295          
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: A0A7S4TAG2_9STRA (Choline transporter-like protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TAG2_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.730e-41
Identity = 109/309 (35.28%), Postives = 167/309 (54.05%), Query Frame = 1
Query:  175 MTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQER-ENI------YFLPSGNGVCVEECPASTNYTQFICYDEVYPGIFDNET---GEVDIEEAW-TRVSAG-------DCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKV 1047
            MT +GF VTG+I ++ L  GNP+RL+NG+DY G ICG+   V  R EN+      YFLPSG  +C+  CP   N+ +F C  E+   I        G   I+ A  T+ S G        C+ H+ TT  L YC  D  I++ +      +  + AN    T++N+T+V  +  + T+F+   AD  T+R +I GFGLG + ++G  +L+ ++ PGVL  ++W ++ G++  L GAG  + + S  W A+    I  D E+    +LS I +     +W + +   RKRI +AIA  KEASRA+  M +
Sbjct:    1 MTGVGFAVTGVIESNTLNKGNPERLVNGMDYHGNICGISNYVTSRGENVMNLPKAYFLPSGLTICIPSCPMEKNFDKFYCQYEIQAEIEQRVAIVAGNAGIDAANNTQKSLGLYYTSTKQCMPHLKTTPYLGYCRPDVPIEVVEGD----LNQKFANESLHTSSNFTIVQEE-PKGTFFDKAMADAKTSRYVIFGFGLGAAMILGLIFLVLIQTPGVLTTMVWSIVIGIFIGLIGAGHYMSRKSAIWMAQG---IRDDREIIGLFWLSRISYVA-SGLWFVTICCLRKRIVLAIACVKEASRAMAAMPI 300          
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 3.370e-39
Identity = 109/356 (30.62%), Postives = 177/356 (49.72%), Query Frame = 1
Query:   43 NEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYFLP-SGNGVCVEECPASTNYTQFI-CYDEVYPGIFDNE-----------TGEVDIEEAWTRVS-------AGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALNGTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLLFLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGEVNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVM 1050
            N V     + +  +    + +    +R+CTD+LF+L+L  AW AMT LG         DG+  GNP  LLNGIDY+GRICGV   V+++  +Y++   G GVCVEECP  TN+     C DE + G   +E             + D++              AG C+Y + + + +  CVF S  ++ D+                    +  V  DV+   + ++  +D+  ARG I GFG   S ++G  YL  L++PG++ ++IWG +  V+ IL   G   +  SE W  + E   H+D +V  ++   Y+ + G   ++  L+++ RK+I +A  I KE+ RA+  +K+M
Sbjct:    4 NSVTPKEGEKRGAKLAAPDDIEGGADRRCTDVLFMLVLILAWLAMTYLGV--------DGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYIRFDGTGVCVEECPTVTNFDHLWGCTDE-FSGFTVDEGYDCSDDPLECAAKADVDPTGAEDGGFGGGDGAGVCMYQVESVDFVGRCVF-SEPEVLDK--------------------FVDVGGDVA---YLQEAASDVYAARGWIFGFGFCFSTILGFFYLGMLQLPGLVCMMIWGSIACVFFILVAMGFGFVSLSEDWEGDGE---HTDTQVMGSRVTGYLAY-GCAFLFLCLIVFLRKQIALANGIIKESVRAIGTVKMM 322          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6322.17067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF7_ECTSI4.250e-20596.70Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S3Y650_HETAK1.080e-9146.37Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A835Z9G9_9STRA3.670e-8941.93Choline transporter-like protein n=1 Tax=Tribonema... [more]
A0A7S3Y6D2_HETAK2.400e-8744.92Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A7S2Y2B5_9STRA1.670e-7843.30Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
B8C1T3_THAPS6.810e-4834.77Choline transporter-like protein (Fragment) n=1 Ta... [more]
A0A8J2WZ97_9STRA2.190e-4431.95Choline transporter-like protein n=1 Tax=Pelagomon... [more]
A0A7S4T9X0_9STRA1.100e-4335.53Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4TAG2_9STRA1.730e-4135.28Choline transporter-like protein n=2 Tax=Ditylum b... [more]
D8LIJ7_ECTSI3.370e-3930.62Choline transporter-like protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6322contigEcto-sp13_S_contig6322:3212..7887 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score584.3
Seed ortholog evalue3.7e-164
Seed eggNOG ortholog2880.D7FSF7
Model size1059
KEGG koko:K06515,ko:K15377
KEGG TC2.A.92.1,2.A.92.1.1
KEGG Pathwayko05231,map05231
Hectar predicted targeting categorysignal anchor
Exons6
EggNOG free text desc.choline transmembrane transporter activity
EggNOG OGsKOG1362@1,KOG1362@2759
Ec32 ortholog descriptionCholine transporter-like
Ec32 orthologEc-04_000670.1
Cds size1059
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6322.17067.1prot_Ecto-sp13_S_contig6322.17067.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6322 3212..7887 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463876.9495842-CDS-Ecto-sp13_S_contig6322:3211..33161681463876.9495842-CDS-Ecto-sp13_S_contig6322:3211..3316Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6322 3212..3316 +
1681463876.9722426-CDS-Ecto-sp13_S_contig6322:4709..49071681463876.9722426-CDS-Ecto-sp13_S_contig6322:4709..4907Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6322 4710..4907 +
1681463876.9811552-CDS-Ecto-sp13_S_contig6322:5499..56341681463876.9811552-CDS-Ecto-sp13_S_contig6322:5499..5634Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6322 5500..5634 +
1681463876.9904752-CDS-Ecto-sp13_S_contig6322:6242..64651681463876.9904752-CDS-Ecto-sp13_S_contig6322:6242..6465Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6322 6243..6465 +
1681463877.0010219-CDS-Ecto-sp13_S_contig6322:6932..72081681463877.0010219-CDS-Ecto-sp13_S_contig6322:6932..7208Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6322 6933..7208 +
1681463877.0121288-CDS-Ecto-sp13_S_contig6322:7765..78871681463877.0121288-CDS-Ecto-sp13_S_contig6322:7765..7887Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6322 7766..7887 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6322.17067.1

>prot_Ecto-sp13_S_contig6322.17067.1 ID=prot_Ecto-sp13_S_contig6322.17067.1|Name=mRNA_Ecto-sp13_S_contig6322.17067.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=353bp
MGYALSEKDKENPDNEVLQGSPDFKARRCCRDEKLVQNGNRKCTDILFLL
MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTV
QERENIYFLPSGNGVCVEECPASTNYTQFICYDEVYPGIFDNETGEVDIE
EAWTRVSAGDCLYHMATTNILSYCVFDSVIDLADEAATLAVEAEMANALN
GTNANYTVVSSDVSESTWFEDVFADMLTARGLIGGFGLGVSALVGTAYLL
FLRIPGVLFLLIWGLLFGVWAILAGAGVMLLQTSETWGAEEEPRIHSDGE
VNAAKYLSYIMFAGMCVVWALLMLWFRKRIKMAIAITKEASRAVNDMKVM
VAF
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mRNA from alignment at Ecto-sp13_S_contig6322:3212..7887+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6322.17067.1 ID=mRNA_Ecto-sp13_S_contig6322.17067.1|Name=mRNA_Ecto-sp13_S_contig6322.17067.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4676bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6322:3212..7887+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGTACGCCTTGAGCGAGAAGGACAAGGAGAACCCGGACAACGAGGT CCTCCAGGGGAGCCCGGACTTCAAGGCGAGACGTTGTTGCAGAGATGAAA AACTTGTGCAGGTTTACTCTCTCATGTCGTAGTACCGAAGTTGGCCCCCG GTCGGGCGTCGCAACAATGTATTTAGACTAAAACTGTACCAGTCAACAGA CCTGGTAGAGAATAGCGTGCATGTCTTCGGGATGGGTTGTACTCCTTCGG GTGGATGTCGGCGTGGGTCGTTGCCGTCGCCGACTGCTGTCTCTCACGCG AAGGCTGCAAGGAGTGCTGATGTCAAACCACCGTACTCTGAACAGCCCGG CATGGCCCAAGAGACGACACGGCTCGAAAAGGCGTACGCCTACTGTTCTC TCTCTCCCGCTCCCTCGACAACGCGCGTATGGTATGGTACATTTATGCGT GTCGTGCTTCCCAGCACGTTTTCCAGCACGGTCGCCGTGGACATTTCGCC TCTAAATTATGCAGCAGACTGATACGCACATGCTGTAGTCTACGCACGGA TGGAACTTCTCTGAACTCAATATAGAATGCACTGCACGGAAGCAGTACCC ACCGGTGAAAGGCACATGTAAAAAAAGGATGAATCAATCCTACGGTACCG GTTTAGAGAATCCTCCTGGGGACGAGGTTCGAAGGAGCGTGTGGAAGGTC GAATTGGTCTGAAGCATTCGAGACGCGTGTCTATTCGATGAAAAGGCTGC TTTCCGTTCACCACTCAGTAGACTAATGGATGAGCCTTTCTGGAACCAAA GATGTGAACGCGGGTTCGATTTCCAGACACGGTACTTAAGAGGTACCACA TGTTGAGACTTTTCCAGCAGCGCATGCCGACGGGTCCGCCCCGGAGTTCA CTGCTGCTGTCAAAGCTGGGAGGCCAAGCGCCCTTGACTGACTGGGTTCT CTACAATGGACTAACCTTTATTGAACAACACCGGTCTGGACGAGAGAAGT GTCTTTGGAGGTACCGACATTTGTCGAGGCGACTCAAGGTGCAATGCCTT GTCGAAGCGATGCCGCCTTCGCTGAAGGCGATGGAGAAAGAGCCCGTAGA TGCATGGTGAAATCCCACACTCTTCCCTACATGCGTTGCAGGTGCTGCGG CACTCTGAAGGGACCTTTCCCCCTCGGAAGGTTGAGCTTCGAAGCAAACG ATGCACGGCACAGCGGAACATTAAGTCGGGTATGAGCCGCTCGTGCCCTG TCCCTCGCAACAGACCCCAACGAGGAAACAATGACGATGCGTTCGCAGGA GGGATAACAATGAAATACTTCACCGCGACGACTTCCTCGCACAGTAATCT TCTTGTATGTACGGTGATATTGTCCCGTCCTGTTTGCACGCCGCGAAGCG CTTGGCAAAGACACGTCTCCCAAGTAGCTCATATTTGTCGCTAACTAACT AGACAAACGCGCTTTGCTCACATGCGTGCCCGCGTCAATCAACCTCAGGT CCAGAATGGGAACCGAAAATGCACGGATATCCTCTTCCTCCTCATGTTGT TTGCGGCCTGGGCGGCGATGACCATGCTTGGGTTCATCGTCACGGGGTTA ATCCCGAACGATGGGTTGGAGCCGGGAAATCCCAAACGCCTTCTCAACGG CATCGACTACGAAGGTCGCATCTGCGGGGTGGGCACCACCGTACAGGTAA AGCTGCGTGTCTTTCTCTCTCTTCCCTCGGGGTTTCCGAAAAGATAAAAT TGGAAGCAATTCGAAAGAATGCAATATCCGAAGTTGGAGGGTCGGCGAGT TCTGCCAAGAGCACTTTAGCCGTATCCGCCCTGCACGGCGTATAACGAAA CTTTATGGACGAATACAGGTATGACGCACTCAAGAACCCCTACTGGTTTT GGCCGAGGCTAGGTTCTCATTTAGCCCCTGCAGGGTTGTGCTACAAATGG CCGTTGTATGGGTTGTAGTGTAGGAGTTATTGACCTCAAACCGTGCCCAA AGATTTATCTGCTAAGTTCCCAAGTGCGGGCGCTATCTGTAGTGTTACGG AGGTATACTACTCTGAATGCACATACTCCCTGCACTATACCTGTTTGTAG AACATTTGCCGCATACAACGTTGTATTGCTGAGCTGCTACAAAGGTTGAA TTCCAATCGGGGCGTGTGGGGGCGAGCGTCGTTGTTCAGAAACCGAAGTA CATCGGCTGGTTCTTTAGAACATCGAACTCCCATCGACTGACCGCGAAGA CCGTGCTCTCTTCATCGCCGACGAATTCTGGCGCGCAGGAGCGAGAGAAC ATCTACTTCCTGCCGTCCGGAAACGGCGTGTGCGTGGAAGAATGCCCGGC CTCAACCAACTACACCCAATTCATTTGCTATGACGAGGTCTACCCAGGGA TCTTCGACAACGAGACCGGCGAGGTACAGAAGACATGTGCCCCACTAATC CTTAATGTGTAAAGGGAATCGTGATTGAAAGTAAGTGAAGCCTGGGTTTA TCCTTACGTTTGGGGGTTGAGAAAGTCAATCTCGGTTGAGCTTACTCGCA CAACCACGGAGTAGCACACTCTTCGTCGTGAAGTATTCGGAGCCTTGACC AATCTAGAGTGGTGCGATATGTCGCATGACTACGTCTCAGGAATAGCGAT GGGACTAGGGGCCTCGTCACATGTGTGCCATTGCACGAGTCCCTAGGTGT GCAGACAAAAGCACCCACGTGCAAAACAAGTCGTTGTCGGAGGGTCGTTC GGGGGTAGGTACTGTTCTCGTAGTCGATCTGCACGAACCCTGTTTCTTTA CCTATCAAAACCACACCAAATCCATATATTTCACAGATGGATGATAAGGG TCGTCTGGGATTTTCAACGAATCCAAGGCTTTGCAGATATAATAGCCAAC CTATGTATTTACAATGAATTCATCACGTTGTAGATATGATAATCAACCTG CATATTTCAACAAATCCGTAGTGTGATAGGTGTGATAACCAACCTGTATT TCTACGTCTTTCCTTGTCTCGATCGCCGCAGGTTGACATCGAGGAAGCCT GGACTCGAGTTTCGGCCGGGGATTGCCTCTACCACATGGCAACCACCAAC ATACTGAGCTACTGCGTCTTCGACTCTGTGATCGACCTGGCGGATGAGGC AGCCACGCTAGCTGTCGAAGCGGAGATGGCCAACGCTCTCAACGGGACCA ACGCTAACTACACGGTCGTCTCGTCTGACGTATCGGAGTCCACGTGGTTC GAGGGTGGGTCGAGTGGTGGTTCAGATCCATCCCTGTTGAAAACTGTTGC TCTTGTGCTCGACAGGCTCCCTCCCGGGGCAACTCTCTATTTTGTCCTTG TCGACGGTGGGTGGATTGGTTCCGTGTCGCGGTGGAAGCTGGTTCTGCGC TGAACATGGACATTCAAATCGTTGTCGCACGCTTTATTGCTGTCCATTCG CTTCACACTCCATTCGCTAGTCTAAAGCTGTCGATGTATATGTGAAGCAT TAGCCGTGGTCCCAGCAGGAGGCGTTCTCCACCTTTCCCTTGCCGTAAAT TGAAACAATAAATGAGTGGTATCTTCGACCTCGAATAAAATGTCTCTTAC ACGAACCCCTTTCAAAAAAGAACCGGCACTGCACTGTCTCTCTGCGACCC TTCCACTCCTCCCTCTCTCTATCTGATACACCCCATTGCCTCCTTCTGTC TCTTCCCCCCCATCCATGCAGACGTATTCGCCGACATGCTGACCGCTCGA GGCCTGATCGGCGGTTTCGGTCTGGGAGTCTCTGCGCTCGTCGGCACGGC GTACTTGTTATTCCTCCGCATCCCCGGGGTGCTGTTCCTCCTCATATGGG GCCTCCTGTTCGGCGTGTGGGCGATCCTTGCCGGGGCCGGAGTGATGCTA CTCCAGACGTCGGAGACCTGGGGGGCGGAGGAGGAGCCTCGGATTCACAG CGACGGGGAAGTTAACGCCGCCAAGTATCTCTCCTACATCATGTTCGGTG CGTTGCTTGTCCTTAACCCTAATCCTAAGTCGTTGGTTCTTGTTTTGTGG TGTCGTAGTAGCGAGTTTTCTTTATTCAGTGGCCTCTTGTGCTCCCCGGA ATTTTTTCGACTTTTTCACCTATCTTTTTAGTTTTCTTGTAAAGCAGTGG GACTAATCTATCTCCATGCATGAACGAGAATCCAAGAGACGTTTGCAGTT GTGCGTAGGACACGCCCCTGCGGACAAGAAAGTTTGTTTTGCGCGACCTT ACGTCCTTCATCGACCAGTGGGAAGCCAAAAGAGAATATGCGGGTTTGTC GTGGGTATGGTCCATGTTCTTATGCTGAGTAAAATCGATCCCTCGGCTTC TCATCTATTTTACGAGCATCTCACGCTGTCGCGCATCCTGTACATGCGCA GCATGCCGCACAAATCCCACGTCGTCGTCGCTGAAACACCGCTCACTGTA GATCGGTTTCATAGGCCGGCAACCGCGTGTGTGTGGGAAAACTCTTTCGT TGCGCTTAACATGGACCGACGGCCGTTCGTTCCGTTTTGTGACCGGCTTC GGAGCAGGGATGTGCGTTGTGTGGGCTCTCCTGATGCTGTGGTTCCGAAA ACGGATTAAGATGGCCATCGCTATCACAAAGGAGGCTAGCAGAGCGGTGA ACGATATGAAGGTAATGGTTGCTTTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6322:3212..7887+

>mRNA_Ecto-sp13_S_contig6322.17067.1 ID=mRNA_Ecto-sp13_S_contig6322.17067.1|Name=mRNA_Ecto-sp13_S_contig6322.17067.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1059bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6322:3212..7887+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGTACGCCTTGAGCGAGAAGGACAAGGAGAACCCGGACAACGAGGT
CCTCCAGGGGAGCCCGGACTTCAAGGCGAGACGTTGTTGCAGAGATGAAA
AACTTGTCCAGAATGGGAACCGAAAATGCACGGATATCCTCTTCCTCCTC
ATGTTGTTTGCGGCCTGGGCGGCGATGACCATGCTTGGGTTCATCGTCAC
GGGGTTAATCCCGAACGATGGGTTGGAGCCGGGAAATCCCAAACGCCTTC
TCAACGGCATCGACTACGAAGGTCGCATCTGCGGGGTGGGCACCACCGTA
CAGGAGCGAGAGAACATCTACTTCCTGCCGTCCGGAAACGGCGTGTGCGT
GGAAGAATGCCCGGCCTCAACCAACTACACCCAATTCATTTGCTATGACG
AGGTCTACCCAGGGATCTTCGACAACGAGACCGGCGAGGTTGACATCGAG
GAAGCCTGGACTCGAGTTTCGGCCGGGGATTGCCTCTACCACATGGCAAC
CACCAACATACTGAGCTACTGCGTCTTCGACTCTGTGATCGACCTGGCGG
ATGAGGCAGCCACGCTAGCTGTCGAAGCGGAGATGGCCAACGCTCTCAAC
GGGACCAACGCTAACTACACGGTCGTCTCGTCTGACGTATCGGAGTCCAC
GTGGTTCGAGGACGTATTCGCCGACATGCTGACCGCTCGAGGCCTGATCG
GCGGTTTCGGTCTGGGAGTCTCTGCGCTCGTCGGCACGGCGTACTTGTTA
TTCCTCCGCATCCCCGGGGTGCTGTTCCTCCTCATATGGGGCCTCCTGTT
CGGCGTGTGGGCGATCCTTGCCGGGGCCGGAGTGATGCTACTCCAGACGT
CGGAGACCTGGGGGGCGGAGGAGGAGCCTCGGATTCACAGCGACGGGGAA
GTTAACGCCGCCAAGTATCTCTCCTACATCATGTTCGCAGGGATGTGCGT
TGTGTGGGCTCTCCTGATGCTGTGGTTCCGAAAACGGATTAAGATGGCCA
TCGCTATCACAAAGGAGGCTAGCAGAGCGGTGAACGATATGAAGGTAATG
GTTGCTTTC
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