prot_Ecto-sp13_S_contig63.17042.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig63.17042.1
Unique Nameprot_Ecto-sp13_S_contig63.17042.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length388
Homology
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BLAST of mRNA_Ecto-sp13_S_contig63.17042.1 vs. uniprot
Match: A0A6H5J5H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5H1_9PHAE)

HSP 1 Score: 533 bits (1372), Expect = 1.970e-187
Identity = 289/362 (79.83%), Postives = 291/362 (80.39%), Query Frame = 0 
Query:    1 MHRVALNHGRVLIVAGKTNAARGWSVLSRHGTRRALSDTGVSGGDSGESSAQGGGARGRQKGVGGAGGATQPAG--------------------------------RGRGAFSQFLRTHERKIGKQLRKIDEFPEDDRGGDPASGQFEDSDEGSGPKKFSGTARDEGLLFEEKEPEDDSRSSKSQDDKWQEQWFSHEDKRLDKLGLE-PEGETGGDLPELDDCEEDDHFDPDDEWDDEAWKGYTPEQIEEFKILGARLEEEESKQMADLRRRWKETKADSVKKHGTAEHLELPDIIIKHEITYEAPPGKANADRSMPIPRPVETIVDSMQLPPGLDVTPDDPEYEEVAKMWMTLSRNNTMDE 329
            MHRVALNHGRVL VAGKTNAARGWSVLSRHGTRRALSDTG SGG                       G                                      RGRGAFSQFLRTHERKIGKQLRKIDE PEDDRGGDPASGQFEDSDEGSG KKF+GTARDE LLFEEKEPEDDSRSSKSQDDKWQEQWFSHEDKRLDKLGLE PEGE GGDLPELDDCEEDDHFD DDEWDDEAWKGYTPEQIEEFKILGARLEEEESKQMADLRRRWKETKADSVKKHGTAEHLELPDI+IKHEITYEAPPGKANADRSMP PRPVETIVDSMQLPPGLDVTPDDPEYEEV KMWMTLSRNNTMDE
Sbjct:    1 MHRVALNHGRVLTVAGKTNAARGWSVLSRHGTRRALSDTGDSGG-----------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRGAFSQFLRTHERKIGKQLRKIDEIPEDDRGGDPASGQFEDSDEGSGTKKFAGTARDEELLFEEKEPEDDSRSSKSQDDKWQEQWFSHEDKRLDKLGLEQPEGEMGGDLPELDDCEEDDHFDADDEWDDEAWKGYTPEQIEEFKILGARLEEEESKQMADLRRRWKETKADSVKKHGTAEHLELPDIVIKHEITYEAPPGKANADRSMPTPRPVETIVDSMQLPPGLDVTPDDPEYEEVVKMWMTLSRNNTMDE 339
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BLAST of mRNA_Ecto-sp13_S_contig63.17042.1 vs. uniprot
Match: D8LRT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT9_ECTSI)

HSP 1 Score: 526 bits (1355), Expect = 4.140e-186
Identity = 274/292 (93.84%), Postives = 278/292 (95.21%), Query Frame = 0 
Query:    1 MHRVALNHGRVLIVAGKTNAARGWSVLSRHGTRRALSDTGVSGGDSGESSAQGGGARGRQKGVGGAGGATQPAGRGRGAFSQFLRTHERKIGKQLRKIDEFPEDDRGGDPASGQFEDSDEGSGPKKFSGTARDEGLLFEEKEPEDDSRSSKSQDDKWQEQWFSHEDKRLDKLGLEPEGETGGDLPELDDCEEDDHFDPDDEWDDEAWKGYTPEQIEEFKILGARLEEEESKQMADLRRRWKETKADSVKKHGTAEHLELPDIIIKHEITYEAPPGKANADRSMPIPRPVETI 292
            MHRVALNHGRVL  AGKTNAARGWSVLSRHGT RALSDT VSGG SGESS Q   ARGRQKGVGGAGGATQPAGRGRGAFSQFLRTHERKIGKQLRKIDEFPEDDRGGDP SGQF+DSDEGSG KKF+GTARDEGLLFEEKEPEDD RSSKSQDDKWQEQWFSHEDKRLDKLGLEPEGE GGDLPELDDCEEDDHFDPDDEWDDEAWKGYTPEQIEEFKILGARLEEEESKQMADLRRRWKETKADSVKKHGTAEHLELPDI+IKHEITYEAPPGKANADRSMPIPRPV +I
Sbjct:    1 MHRVALNHGRVLTAAGKTNAARGWSVLSRHGTWRALSDTSVSGGGSGESSGQEXXARGRQKGVGGAGGATQPAGRGRGAFSQFLRTHERKIGKQLRKIDEFPEDDRGGDPGSGQFDDSDEGSGTKKFAGTARDEGLLFEEKEPEDDFRSSKSQDDKWQEQWFSHEDKRLDKLGLEPEGEMGGDLPELDDCEEDDHFDPDDEWDDEAWKGYTPEQIEEFKILGARLEEEESKQMADLRRRWKETKADSVKKHGTAEHLELPDIVIKHEITYEAPPGKANADRSMPIPRPVVSI 292
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig63.17042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J5H1_9PHAE1.970e-18779.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRT9_ECTSI4.140e-18693.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig63contigEcto-sp13_S_contig63:31741..38703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig63.17042.1mRNA_Ecto-sp13_S_contig63.17042.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig63 31741..38882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig63.17042.1 ID=prot_Ecto-sp13_S_contig63.17042.1|Name=mRNA_Ecto-sp13_S_contig63.17042.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=388bp
MHRVALNHGRVLIVAGKTNAARGWSVLSRHGTRRALSDTGVSGGDSGESS
AQGGGARGRQKGVGGAGGATQPAGRGRGAFSQFLRTHERKIGKQLRKIDE
FPEDDRGGDPASGQFEDSDEGSGPKKFSGTARDEGLLFEEKEPEDDSRSS
KSQDDKWQEQWFSHEDKRLDKLGLEPEGETGGDLPELDDCEEDDHFDPDD
EWDDEAWKGYTPEQIEEFKILGARLEEEESKQMADLRRRWKETKADSVKK
HGTAEHLELPDIIIKHEITYEAPPGKANADRSMPIPRPVETIVDSMQLPP
GLDVTPDDPEYEEVAKMWMTLSRNNTMDEVCLAAQCSGLDRWHCLKHNTY
EQLHICVGWSLAVEAVRVFFSLLFPGGCSTRRVFHVP*
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