mRNA_Ecto-sp13_S_contig6297.17037.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6297.17037.1 vs. uniprot
Match: D7FNT8_ECTSI (Exportin-T n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT8_ECTSI) HSP 1 Score: 1190 bits (3079), Expect = 0.000e+0 Identity = 721/765 (94.25%), Postives = 726/765 (94.90%), Query Frame = 1
Query: 1 AGGGGGGVEVGRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRAAAAXXXXXXAGLVGEGENGGDDAIGAELAAGVGAMANVSKGFKPVVSAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPLIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGGVPAAAVAGGDGAXXXXXXXXXXXXXXXXXXXXKKGLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCEQAVPAALKCLVDGAPPTGLDLRDAAALSAIVNMGALLKEAREASGGSARFVGVAALACSCTPQVAEQLQLAVEGAADGPAIATALK 2295
A GGGGV GRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXX PA+PGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMP VPVPKQVQLLDGVLGPQMRRIAENLQRAA+A AGLVGEGE GGDDAIGAELAAGVGAMANVSKGFKPVV+AEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMP IRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX GAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGGVPAAA AG GAXXXXXXXXXXXXXX KKGLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCE+AVPAALKCLVDGAPPTGLDLRDAAA+SAIVNMGALLKEAREASGGSARFVGVAALACSCTPQVAEQLQLAVEGAADGPAIA ALK
Sbjct: 390 ANSGGGGV--GRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXXPAAPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPTVPVPKQVQLLDGVLGPQMRRIAENLQRAASAGAGGG-AGLVGEGEKGGDDAIGAELAAGVGAMANVSKGFKPVVAAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWPNGTTAELPXXXXXXXXXXXXXXXXX-XXGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGGVPAAA-AGEGGAXXXXXXXXXXXXXXT-----KKGLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCERAVPAALKCLVDGAPPTGLDLRDAAAMSAIVNMGALLKEAREASGGSARFVGVAALACSCTPQVAEQLQLAVEGAADGPAIAAALK 1144
BLAST of mRNA_Ecto-sp13_S_contig6297.17037.1 vs. uniprot
Match: A0A6H5KW21_9PHAE (Exportin-T n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW21_9PHAE) HSP 1 Score: 940 bits (2430), Expect = 0.000e+0 Identity = 581/620 (93.71%), Postives = 584/620 (94.19%), Query Frame = 1
Query: 436 MVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRAAAAXXXXXXAGLVGEGENGGDDAIGAELAAGVGAMANVSKGFKPVVSAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPLIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGGVPAAAVAGGDGAXXXXXXXXXXXXXXXXXXXXKKGLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCEQAVPAALKCLVDGAPPTGLDLRDAAALSAIVNMGALLKEAREASGGSARFVGVAALACSCTPQVAEQLQLAVEGAADGPAIATALK 2295
MVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQR AAA AGLVGE E GGDDAIGAELAAGVGAMANVSKGFKPVV+AEVEARF QALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMP IRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGG A G XXXXXXXX K LRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCE+AVPAALKCLVDGAPPTGLDLRDAAA+SAIVNMGALLKEAREASGGSARFVGVAALAC CTPQVAEQLQLAVEGAADGPAIATALK
Sbjct: 1 MVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRVAAAGAGGV-AGLVGESEKGGDDAIGAELAAGVGAMANVSKGFKPVVAAEVEARFLQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPFIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFNRGRSGGDVGAGKGGAS--------ANGPAGXXXXXXXXXKSLRAAATQRRALSGKGGGLWTGSGPTVDMEPGVQSAVTAFVCERAVPAALKCLVDGAPPTGLDLRDAAAMSAIVNMGALLKEAREASGGSARFVGVAALACGCTPQVAEQLQLAVEGAADGPAIATALK 611
BLAST of mRNA_Ecto-sp13_S_contig6297.17037.1 vs. uniprot
Match: A0A836CAL0_9STRA (Exportin-T n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL0_9STRA) HSP 1 Score: 397 bits (1020), Expect = 1.100e-120 Identity = 275/580 (47.41%), Postives = 349/580 (60.17%), Query Frame = 1
Query: 40 FRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRAAAAXXXXXXAGLVGEGENGGDDAIGAELAAGVGAMANVSKGF-KPVVSAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLL-RALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPLIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLL 1773
F AMDH P+LL+ +Y RM++P DF FD DE++GEE+ LR LRK LVN R APE VL F C ALS+LP+PLS LP+P EAALRL++HF EGC + A+ A LL GAFPQMV ALH SD+ARH HPQV++LYF + VRY K+L G L P VLEA+C +GLSNA +R R+ Y L++LVKA+ +VPYV+ +VP V ALL S + LSDE+ LNLYET+G LVGMP VP ++V L+GVL P + R+ E L + A +A GA LA + +ANVSKGF KP+ E A F Q LEAA + L++ P H +RA+ +FLVH ++P LGEG+L R P A LV G DL E+ Q+LNQ + +GPK+ +D L+PLIR+ Y L P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAG+ + L+HEV ER K S + HV S+G+ GVL S NAP LD VL+SV+D L+ +D KK+C+ F+ +
Sbjct: 409 FNAMDHAPRLLSVVYARMQFPADFEFDAEDEEDGEEEALRGALRKVLVNTCRAAPELVLRFACEALSALPSPLSALPWPAAEAALRLLYHFSEGCASAA-----------------AAANAQALLHEGAFPQMVAALHRSDIARHPHPQVLILYFDIAVRYVKVLRGGGAELTPLVLEALCSERGLSNASRLVRARAAYNLSRLVKALAGDMVPYVEAVVPAVAALLRSGASQGL-LSDESVLNLYETLGCLVGMPAVPAERRVAYLEGVLAPLLARVHEALAQPQAIAQDP--------------EAAGAALAFCLAGLANVSKGFTKPLP--EAVAPFTQELEAAAAVLLALPDHPGVRARAIFLVHRMVPVLGEGMLPRVGPACA--ALVARCTGADLEEIVQLLNQFCVAFGPKAFAFMDAMLLPLIRKIYDLMP---------------------------PPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSPLQSPPEPLSHEVLERTALLKQYLSFLTHVVSDGMLGVLCSAANAPQLDAVLQSVLDTLAQVDDPVAKKSCIAAFAAM 925
BLAST of mRNA_Ecto-sp13_S_contig6297.17037.1 vs. uniprot
Match: A0A448ZS68_9STRA (Exportin-T n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS68_9STRA) HSP 1 Score: 255 bits (652), Expect = 7.950e-69 Identity = 191/607 (31.47%), Postives = 291/607 (47.94%), Query Frame = 1
Query: 58 LPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAM------KEG----VVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRAAAAXXXXXXAGLVGEGENGGDDAIGAELAAGVGAMANVSKGFK-PVVSAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPLIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLLGGFN---RGR--SGGVPAAAVAG 1830
LP+LL Y +M+YPPDF +D D+DE EE+M R +LRK +R P+ L+F C+ LS LP PLS P P++E A+ L++ + EG RP PG ++R+ F +++ LH SD+ H H ++++LY++ +VRY +L + L+ KVL AI G +GL + D +R+R CY L +L+K+M K G + PYV+ V G+Q+LL++ ++L + LNL+ETIG L+G + +Q Q L V+ P +R I L DA G L+ V A+A +SKGFK P + EV+ + L+ A S L P + +R KT V LI CL + +L +P L +L++ + D+++V+Q++NQL I++ K+ +LD L+P +++ + L+ S E + H E QKL F+V+ HV +N + GVL S NA L+ +L+S+ +G ED+ KKTCL F LLL + RG SGG P V G
Sbjct: 429 LPKLLTITYNQMRYPPDFQYDFEDDDEAEEEMYRTELRKLNKKFVRANPDLCLQFTCQILSQLPLPLSTAPTPNVEVAISLVYQYCEGI-------------------RPP-PGMKVVMRNETFCNLLVGLHTSDITEHPHREILILYYETSVRYYPLLKERSD-LLQKVLGAITGTRGLQHEDAKVRSRCCYLLLRLIKSMGTSGNKKSGGNCLLRPYVETAVSGIQSLLENKS---IELRVDDTLNLFETIGLLLGKNGLSPSEQGQYLTQVMTPHVRSIETILNDKKHELAQDP-------------DAYGETLSNSVAAIAYLSKGFKKPPI--EVQNVLLETLKVAFSVLEMLPNNEEVRNKTYIFVQRLIQCLEDKVLDVMP-RLLFILIKHCNSGDILDVSQLINQLCIKFRAKAMCVLDSNLLPFLQKCHHLSNTVVSENSSAQERHQ---------------------------------------------------GEDATVAPHLRTEELSIQKLSFAVLNHVVANDVTGVLLSSANASSLEAILQSMSEGAINVEDSLMKKTCLIFFRLLLNQWVPDVRGTNISGGAPEFVVQG 944
BLAST of mRNA_Ecto-sp13_S_contig6297.17037.1 vs. uniprot
Match: A0A6U9ZEP0_9STRA (Exportin-T n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZEP0_9STRA) HSP 1 Score: 250 bits (639), Expect = 8.020e-68 Identity = 191/614 (31.11%), Postives = 288/614 (46.91%), Query Frame = 1
Query: 58 LPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEG------------VVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRAAAAXXXXXXAGLVGEGENGGDDAIGAELAAGVGAMANVSKGFKPVVSAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPLIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIFSLLL----------GGFNRGR-SGGVPAAAVAG 1830
LP+LL Y +M+YPPDF +D D+DE EE+M R +LRK +R PE L+ C+ LS LP PLS P P +EAAL L++ + EG RP PG ++R+ F +++ LH SD+ H H +V+ LY++ +VRY +L P L+ K+L A+ G +GL + + +R+R CY L +L+K++ + PYV+ V G+Q LL++ ++L E LNL+ETIG L+G + +Q Q L V+ P +R I L DA G L+ + A+A +SKGFK EV++ + L A S L + P + +R KT V LI CLG+ +L +P L +L+Q +D+++V+Q++NQL I++ K+ LD L+P +++ + L+ + G A A L E+ QKL ++V+ HV +N + GVL S TN L+ +L+S+ +G ED KKTCL F +LL GG N GR +GG P V G
Sbjct: 255 LPKLLTITYNQMRYPPDFQYDFEDDDEAEEEMYRTELRKLNKKFVRANPELCLQLTCQILSQLPLPLSTAPTPHVEAALSLVYQYCEGI-------------------RPP-PGMKVVMRNETFCNLLVGLHTSDIIEHPHREVLTLYYETSVRYYPLLQKRPD-LLQKLLGAMTGTRGLQHENAKVRSRCCYSLLRLIKSVGNTNNANKSNESSCLLRPYVETAVSGIQGLLENEN---IELRVEDTLNLFETIGLLLGKNGLSPSEQGQYLAQVMTPHVRSIETILNGKKQELAQDP-------------DAYGETLSNSIAAIAYLSKGFKKPPF-EVQSVLLETLRVAFSVLETLPTNEEVRNKTYVFVQRLIQCLGDKVLDVIP-RLLFLLIQHCTAEDILDVSQLINQLCIKFRAKAMCALDSNLLPFLQKCHHLSNTIAADDSTGQERQQFH---------------------------------------------GVNVAVAPHLRT----EQLSIQKLSYAVLNHVVTNEVTGVLLSSTNVSSLEAILQSMSEGAINVEDPLMKKTCLIFFRVLLHQWVPSSTANGGGNNGRLNGGAPDFVVQG 780
BLAST of mRNA_Ecto-sp13_S_contig6297.17037.1 vs. uniprot
Match: A0A7S4M7Y7_9STRA (Exportin-T (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M7Y7_9STRA) HSP 1 Score: 245 bits (626), Expect = 6.020e-67 Identity = 158/438 (36.07%), Postives = 231/438 (52.74%), Query Frame = 1
Query: 40 FRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSS-LPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRAAAAXXXXXXAGLVGEGENGGDDAIGAELAAGVGAMANVSKGFKPVVSAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPLIRRTYQLTP 1350
F DHL +LL +Y +M+YPPDFAFDP DEDE EE++ R +LRK +A+R+ P+ +EF+ LSS L PLS P PD+EAALRL++H EG RP PGA L + G F M++ LHDSDV+ H H +V+MLY+ ++VRY +L D P L+ ++L I GP+GL++ +R+RSCY L KLV +M + + PY + G+Q+LL+ P P+ LS + +L L+ET G L+G + Q + L V+ P + I L + G LA V A++N+SKGF S EV + + L S L + P +R+K + +I CLG +L P S L LV +D ++V ++ QL + K+ + G+L+P +RR P
Sbjct: 143 FLVADHLHRLLVVVYDQMRYPPDFAFDPEDEDEAEEEVYRSKLRKLHRDAVRSRPDESMEFLSSTLSSRLSAPLSSAPMPDVEAALRLVYHHCEGV-------------------RPP-PGARTLAKDGRFRSMLIGLHDSDVSSHPHGEVLMLYYDVSVRYHPLLRDRPD-LLERLLGCISGPRGLTHPRPRVRSRSCYLLLKLVSSMGKSLRPYAETAAGGIQSLLNDPTYGPL-LSTDDRLYLFETTGVLLGKTGIEPADQRRYLTAVMTPHVHSIQAILSSTEMTTSSDL-------------ERCGEALAVAVAAISNLSKGFSRP-SGEVSSVLGETLPIVLSVLTALPHDETVRSKCGAYLARMIHCLGLAVLPYAP-SYLDALVMHCTVEDAVDVQMIIQQLASRFKGKAVDAISGSLVPFLRRCRDFAP 543
BLAST of mRNA_Ecto-sp13_S_contig6297.17037.1 vs. uniprot
Match: B7G7L1_PHATC (Exportin-T n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7L1_PHATC) HSP 1 Score: 240 bits (613), Expect = 1.180e-63 Identity = 175/584 (29.97%), Postives = 279/584 (47.77%), Query Frame = 1
Query: 55 HLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALS-------SLPT-----PLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLA-DGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRAAAAXXXXXXAGLVGEGENGGDDAIGAELAAGVGAMANVSKGF-KPVVSAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPLIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCLYIF 1764
HLPQ L LYQ++KYP DF+F+ D++ EE+ R++L K V +R AP T +F+C A + S T +S P PDLEA LRL++ + EG RP +PG +++ F +++ALH+S +A H H +++ Y+ + VRY + L+ +VL+A+ G +GL + +R+R CY L +LVKA+ + P+V+ V G+Q LL + ++L + L L+ETIG L+G + P+Q + L V+ P +R I ++LQ L+ + E GD LA + A+A++SKGF KP S ++ + + + + P H +R KTM L+ +I CLG+ +L +P L +L++ + +D++ V+Q+ NQL I++ S ++DGALMP +R+ Y L P A + H E+ QKL F V+QH+ ++ + VL SPTN +L+ VLRS+ DG D +KTC+ F
Sbjct: 430 HLPQTLNILYQQIKYPKDFSFNFIDDENAEEEQYREELGKLYVKLVRVAPTTCFQFVCEAAAQWLDRTNSSNTNDGCITMSNAPTPDLEATLRLLYKYCEGI-------------------RP-TPGMKTAMKNQTFCALLVALHESPIANHGHFEILCWYYDVAVRYYPIFQHSNHTILLSRVLDAMTGARGLQHGHARVRSRCCYLLLRLVKAIAPLLRPFVETAVAGIQGLLTN---TTLELRPDDTLYLFETIGLLLGKTGIDAPEQARYLTLVMTPHVRSIEKSLQDPR----------LLQDTEFFGD-----RLAQSIAALAHLSKGFSKPAQS--IQLVLMETVNITQIIMEALPNHEQVRNKTMVLLPRMIQCLGDQVLDKIP-RFLYILIEHCNSEDVLFVSQIFNQLCIKFKEASVPVIDGALMPFLRKCYALVPATDDV------------------------------------------------------------AGTSDVPPHLRTEQLSIQKLTFVVLQHIVTHNASAVLMSPTNVGNLESVLRSMSDGAVYVTDPIVQKTCVKFF 912
BLAST of mRNA_Ecto-sp13_S_contig6297.17037.1 vs. uniprot
Match: B8C3C8_THAPS (Exportin-T n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3C8_THAPS) HSP 1 Score: 227 bits (579), Expect = 8.040e-59 Identity = 150/433 (34.64%), Postives = 231/433 (53.35%), Query Frame = 1
Query: 58 LPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAM-KEGVVPYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRAAAAXXXXXXAGLVGEGENGGDDAIGAELAAGVGAMANVSKGFKPVVSAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPLIRR--TYQLT 1347
L ++L+ L +RMKYP F F EE++ R LRK +R P+ VL F+ +LSSLP PLS + D+E ALRL+ H+GEG RPA PGA LR F +MV ALH SDV+ H H +V++LY+ L+VRY+ +L D PP L+ +L A+ G +GL + +R+R CY L +LVK++ + + PYV+V+V G+Q LL P N + L L L+E G L+G + Q + VL P ++ I + LQ A + G +L+ + A+A +SKG++ EV+A A++ S L++ P +R +T L+ +I CLGE +L +P +L +D+++V+Q+LNQL I++ +A +D AL+P +++ T QL+
Sbjct: 600 LQRVLSILQERMKYPSSFDFXXXXXXXAEEEVYRTHLRKLYQRIVRFKPQMVLHFMAASLSSLPQPLSMVSTSDMEVALRLVHHYGEG-------------------RRPA-PGAKTALRDAQFREMVTALHRSDVSSHPHREVLLLYYDLSVRYASLLKDSPPELLSGLLGALSGDRGLQHPHARVRSRCCYLLLRLVKSVGAKAMRPYVEVVVDGIQRLL-FPSTNILQLPANEALYLFEITGTLLGTTGLDNEVQQRCATAVLTPHVQSIEKTLQSPDLARDV---------------EQYGEQLSMSISAIAQLSKGWQNHPPPEVQAVLVAAVDVCRSVLVALPSSPLVRNRTAVLLQRMILCLGERVLPTMPAFLDALLSHCSTEEDVLDVSQLLNQLCIKFKENAAPAIDVALLPFLQKVLTMQLS 996
BLAST of mRNA_Ecto-sp13_S_contig6297.17037.1 vs. uniprot
Match: A0A1E7FPN3_9STRA (Exportin-T n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FPN3_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.470e-53 Identity = 145/443 (32.73%), Postives = 226/443 (51.02%), Query Frame = 1
Query: 58 LPQLLATLYQRMKYPPDFAFDPSDEDEGEEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAM-------KEGVV--PYVDVIVPGVQALLDSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRAAAAXXXXXXAGLVGEGENGGDDAIGAELAAGVGAMANVSKGFKPVVSAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQEGDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPLIRRTYQLTPGAG 1359
+ +LL Y +M+YPPDF +D DEDE EE++ R +LRK +R E L + LS LP PLS P PD+E A+ L++ + EG RP PG ++R F +++ LH SD+ +H H +V+ LY++ +VRY +L + L+ KVL A+ GP+GL + + +R+R CY L +L+K + E V PYV+ V G+Q LL++ N + L E LNL+ETIG L+G + +Q Q L V+ P + I L D L+ + A+A +SKGFK S EV+ + LE A S L + P + +R KT V LI CL + +L +P L +L+Q +D+++V+Q++NQL I++ + LD L+P +++ + ++ G
Sbjct: 432 MSKLLNITYNQMRYPPDFQYDYEDEDEAEEELYRTELRKLNQKFVRKNSELCLRTLSTILSQLPLPLSAAPTPDIEVAVSLVYQYCEGI-------------------RPP-PGMQVVMRDETFRNLLVGLHLSDIIQHPHSEVLTLYYETSVRYHPLLKERSD-LLQKVLGAMTGPRGLQHENGRVRSRCCYLLLRLIKYVGSSSNKSNESSVLRPYVENAVSGIQGLLEN---NNVQLRLEDTLNLFETIGLLLGKNGLSPSEQGQYLTNVMTPHVHSIKTILNERKQYISQDP-------------DTYEQTLSNSIAAIAYLSKGFKKP-STEVQTVLLETLEVAFSVLEALPNNEEIRNKTYVFVQRLIQCLEDKVLNIMP-RLLFLLIQHCTAEDILDVSQLINQLCIKFKANAICALDSNLLPYLQKCHHISNTIG 835
BLAST of mRNA_Ecto-sp13_S_contig6297.17037.1 vs. uniprot
Match: A0A7S2DK11_9STRA (Exportin-T n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DK11_9STRA) HSP 1 Score: 192 bits (488), Expect = 2.770e-48 Identity = 161/591 (27.24%), Postives = 257/591 (43.49%), Query Frame = 1
Query: 28 VGRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEG----EEDMLRQQLRKHLVNAIRNAPETVLEFICRALSSLPTPLSGLPFPDLEAALRLIFHFGEGCGGVSVLNSSXXXXXXXXXXRPASPGAAELLRSGAFPQMVLALHDSDVARHKHPQVVMLYFQLTVRYSKMLADGPPHLIPKVLEAICGPQGLSNADVTLRTRSCYFLTKLVKAMKEGVVPYVDVIVPGVQALL---DSPQGNPMDLSDEAKLNLYETIGFLVGMPNVPVPKQVQLLDGVLGPQMRRIAENLQRAAAAXXXXXXAGLVGEGENGGDDAIGAELAAGVGAMANVSKGFKPVVSAEVEARFFQALEAATSALMSFPRHVALRAKTMFLVHGLIPCLGEGLLRALPLSALLVLVQE--------GDGKDLMEVAQVLNQLTIEYGPKSAQLLDGALMPLIRRTYQLTPGAGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVGAEAQQLLAHEVAERAGFQKLCFSVIQHVSSNGLAGVLSSPTNAPHLDGVLRSVVDGLSGAEDASTKKTCL 1755
+G F A+ +P+LL+ +YQ++ Y +P ++E EE++ R ++R+ + IR PE LEF+C LS L PLS L +P EAALRL++HFGEG G P L +SGAFP ++ A+H SD+ H H V LY +L+VRY K L +G P L+ VL+ +C L++ TLR R C+ L +VK + V P+ V++ GV+ +L DSP G D + +L+E L+ +Q L+ + P + + + +A A +G +A + +A +SK S + + L+ + AL + H +R+K M ++H ++ CL LL L + +LV D+ ++ ++NQL I+Y + +L+ LM L+ R P + QQ H+ + R Q+ F V+QHV+++GL+ VL PTN PHL+ +L +VV G+ +D KKTC+
Sbjct: 99 IGHHFVALSEIPKLLSVIYQQLHYSESSNSEPDGDEEALEEAEEEVHRGRIRRLFLKCIRVVPELSLEFVCSMLSELQPPLSDLRWPRAEAALRLVYHFGEGLG----------------------PKNQTLCQSGAFPTVLAAVHQSDIGMHPHWCVKTLYLELSVRYVKRL-EGQPELVRLVLDRMCS--SLTSPHHTLRARVCFLLKSMVKTLGADVTPFAVVVLNGVRQILFMVDSPLG------DSDRTHLFEIGALLINYATRVPEQQAAHLESFVRPLLNDVEALIGQAQLATHEDTR------------HFMGNSVALKLSYLATLSKSSSRDTS-HLSVVYGTILQVSVKALTAMVTHPMVRSKFMVVLHRMVSCLDNALLLDLLPQPMELLVSHQPTVSSDMSTESDVEDLVAMVNQLMIKYHIRLGPVLEPLLMVLLSRLVDRMPSD----------------------------------------------------------------DKQQ--PHDRSIRLAMQRHYFLVLQHVAAHGLSPVLLGPTNRPHLETLLNTVVCGIRDVDDPMAKKTCI 579 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6297.17037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6297.17037.1 >prot_Ecto-sp13_S_contig6297.17037.1 ID=prot_Ecto-sp13_S_contig6297.17037.1|Name=mRNA_Ecto-sp13_S_contig6297.17037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=765bp AGGGGGGVEVGRLFRAMDHLPQLLATLYQRMKYPPDFAFDPSDEDEGEEDback to top mRNA from alignment at Ecto-sp13_S_contig6297:374..8302- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6297.17037.1 ID=mRNA_Ecto-sp13_S_contig6297.17037.1|Name=mRNA_Ecto-sp13_S_contig6297.17037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7929bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6297:374..8302- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6297:374..8302- >mRNA_Ecto-sp13_S_contig6297.17037.1 ID=mRNA_Ecto-sp13_S_contig6297.17037.1|Name=mRNA_Ecto-sp13_S_contig6297.17037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2295bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6297:374..8302- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |