mRNA_Ecto-sp13_S_contig6284.17022.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6284.17022.1 vs. uniprot
Match: D8LM02_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM02_ECTSI) HSP 1 Score: 669 bits (1726), Expect = 9.980e-236 Identity = 398/478 (83.26%), Postives = 404/478 (84.52%), Query Frame = 3
Query: 63 MGTSSPAVVDVFRCIESIEKRRSEVGTNGSGGSGAKDEARRGKRRSQAADRALRERYYAVLQRKDRSSLSERIKTLRRMVLAQGLPGDVLEHCTTPTSGSSGAEHRNGPEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTSXXXXXXXXXXXXXXXSGTVSVPVDPGEDHQCSLRGLVWKVLLGTIHTDSMLYIRLVAKGPSTEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAVDTARRGSEGRGRGGSGSNEKHGGEEQPPKSEDVPRCSNSAIVEKEGAGAXXXXXXXXXXXXTGEGQERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPRYVAANLDGVHAGCALVDRVLSMVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQ 1496
MGTSSPAVVDVFRCIESIEKRRSEVGT GSG SGAKDE RRGKRRSQAADRALRERYYAVLQRKDRSSLSERIKTLRRMVLAQGLPGDVLEHCTTPTSGSSGAEHRNG E XXXXXXXXXXXXXXXXXXXX S TSXXXXXXXXXXXXXXX TVSVP DPGEDHQCSLRGLVWKVLLGTIHTDSMLYIRLVAKGPS+EDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAA DT N+KHGGEE PPKSEDVPRCSNS+IV+KEGAGA TGEG+ERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPRYVAANLDGVHAGCALVDRVLSMVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVL+CVAQ
Sbjct: 1 MGTSSPAVVDVFRCIESIEKRRSEVGTKGSGESGAKDEGRRGKRRSQAADRALRERYYAVLQRKDRSSLSERIKTLRRMVLAQGLPGDVLEHCTTPTSGSSGAEHRNGQERXXXXXXXXXXXXXXXXXXXXX-----------------------------------SATSXXXXXXXXXXXXXXXXXTVSVPADPGEDHQCSLRGLVWKVLLGTIHTDSMLYIRLVAKGPSSEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAADTXXXXXXXXXXXXXXXNDKHGGEEHPPKSEDVPRCSNSSIVDKEGAGAEAGGAAPATGGATGEGEERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPRYVAANLDGVHAGCALVDRVLSMVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLICVAQ 443
BLAST of mRNA_Ecto-sp13_S_contig6284.17022.1 vs. uniprot
Match: A0A6H5JMC0_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC0_9PHAE) HSP 1 Score: 540 bits (1392), Expect = 1.620e-186 Identity = 358/397 (90.18%), Postives = 364/397 (91.69%), Query Frame = 3
Query: 63 MGTSSPAVVDVFRCIESIEKRRSEVGTNGSGGSGAKDEARRGKRRSQAADRALRERYYAVLQRKDRSSLSERIKTLRRMVLAQGLPGDVLEHCTTPTSGSSGAEHRNGPEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTSXXXXXXXXXXXXXXXSGTVSVPVDPGEDHQCSLRGLVWKVLLGTIHTDSMLYIRLVAKGPSTEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAVDTARRGSEGRGRGGSGSNEKHGGEEQPPKSEDVPRCSNSAIVEKEGAGAXXXXXXXXXXXXTGEGQERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPR 1253
MGTSSPAVVDVFRCIESIEKRRSEVGTNGSGG+ AKDE RRGKRRSQAADRALRERYYAVLQRKDRSSLSERIKTLRRMVLAQGLPGDVLEHCTTPTSGSSGAEHRNGPEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S TSXXXX XXXXXXXXXX GTVS P DPGEDHQCSLRGLVWKVLLGTIHTDSMLYIRLVAKGPS+EDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAA DT RRGSEG+GR GSGS +KHGGEEQPPKSEDVPRCSN AIV K+GAGA TGE +ERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPR
Sbjct: 1 MGTSSPAVVDVFRCIESIEKRRSEVGTNGSGGNSAKDEGRRGKRRSQAADRALRERYYAVLQRKDRSSLSERIKTLRRMVLAQGLPGDVLEHCTTPTSGSSGAEHRNGPEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------SATSXXXXCXXXXXXXXXXXGTVSAPTDPGEDHQCSLRGLVWKVLLGTIHTDSMLYIRLVAKGPSSEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAADTVRRGSEGQGREGSGSKDKHGGEEQPPKSEDVPRCSNPAIVHKDGAGAEAGGAAPASGGATGEREERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPR 390
BLAST of mRNA_Ecto-sp13_S_contig6284.17022.1 vs. uniprot
Match: A0A6H5JUZ1_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ1_9PHAE) HSP 1 Score: 265 bits (678), Expect = 1.870e-82 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 3
Query: 1317 MVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQCVSLRDTLLQDPNPYRHLNARNLPPLDAELLVSMAFSLIPHLPSEMMDEIAQHPFLEEPWQGSEGGDNK 1703
MVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQCVSLRDTLLQDPNPYRHLNARNLPPLDAELLVSMAFSLIPHLPSEMMDEIAQHPFLEEPWQGSEGGDNK
Sbjct: 1 MVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQCVSLRDTLLQDPNPYRHLNARNLPPLDAELLVSMAFSLIPHLPSEMMDEIAQHPFLEEPWQGSEGGDNK 129
BLAST of mRNA_Ecto-sp13_S_contig6284.17022.1 vs. uniprot
Match: A0A0P1AU96_PLAHL (Bub2 protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AU96_PLAHL) HSP 1 Score: 214 bits (544), Expect = 9.510e-60 Identity = 132/340 (38.82%), Postives = 181/340 (53.24%), Query Frame = 3
Query: 648 PGEDHQCSLRGLVWKVLLGTIH-TDSMLYIRLVAKGPSTEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAVDTARRGSEGRGRGGSGSNEKHGGEEQPPKSEDVPRCSNSAIVEKEGAGAXXXXXXXXXXXXTGEGQERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPRYVAANLDGVHAGCALVDRVLSMVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQCVSLRDTLLQ-DPNPYRHLNARNLPPLDAELLVSMAFSLIPHLPSEMMDEIAQHPF 1661
P +D CSLRG VWK LG + D Y LV +G S D IR DTFRTF D EF +RV E+KL R+ N ++ + G +P EE+ K RC N + YVQGM VLCAPLL+V+PE DA++ F L+ +H P Y+A L GV GCALVD+ L +DP L+ +L S+ +TA IYA PL++SL ACVPPL E +++WD +F+ GVH V++ VA V LR+ LL+ D + + L+ R +PPL ++LL+S+A L+ LP +++ EIA+HPF
Sbjct: 43 PRDDSLCSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDLEFAQRVPEEKLVRLLNVFI---NELGSSPS-----------------------------EEENSKDGKNGRCGNLPSIR---------------------------------YVQGMNVLCAPLLYVLPEPDAYHMFCQLIVRHCPHYMAPQLKGVEKGCALVDKCLQTLDPDLYRHLASRGITAQIYALPLILSLFACVPPLHELLRVWDVLFAVGVHFVVILAVAHTVLLREQLLKLDMDLMKVLSLRCVPPLQSDLLISVALQLLHRLPEDLVYEIARHPF 317
BLAST of mRNA_Ecto-sp13_S_contig6284.17022.1 vs. uniprot
Match: A0A484E312_BRELC (Rab-GAP TBC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E312_BRELC) HSP 1 Score: 208 bits (530), Expect = 4.720e-58 Identity = 129/333 (38.74%), Postives = 180/333 (54.05%), Query Frame = 3
Query: 669 SLRGLVWKVLLGTIH-TDSMLYIRLVAKGPSTEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAVDTARRGSEGRGRGGSGSNEKHGGEEQPPKSEDVPRCSNSAIVEKEGAGAXXXXXXXXXXXXTGEGQERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPRYVAANLDGVHAGCALVDRVLSMVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQCVSLRDTLLQ-DPNPYRHLNARNLPPLDAELLVSMAFSLIPHLPSEMMDEIAQHPF 1661
SLRG VWK LG + D Y LV KG S D +IR DTFRTF D EF +RV E+KL R+ N ++ + G P+ T NE+ G ++ RC N + YVQGM VLCAPLL+V+PE +A++ F L+ +H P Y+A L GV GCALVD+ L +DP L+ +L S+ + A IYA PL++SL ACVPPL E +++WD +F+ GVH V++ VA V LR+ LL+ D + + L+ R +PPL ++LL+S+A L+ LP +++ EIA+HPF
Sbjct: 57 SLRGRVWKAFLGVENDVDMTKYSALVGKGASHYDGEIRNDTFRTFRGDSEFAQRVPEEKLVRLLNVFI---NELGSTPLGET--------------------NEEEG---------ELARCGNLPSIR---------------------------------YVQGMNVLCAPLLYVLPEPEAYHMFCQLIVRHCPHYMAPQLKGVEKGCALVDKCLQTLDPELYRHLTSRGICAQIYALPLILSLFACVPPLHELLRVWDVLFAVGVHFVVVLAVAHTVLLREHLLKLDMDLMKVLSLRCVPPLQSDLLISVALQLLHRLPEDLLYEIARHPF 324
BLAST of mRNA_Ecto-sp13_S_contig6284.17022.1 vs. uniprot
Match: W2RIC6_PHYPN (Rab-GAP TBC domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RIC6_PHYPN) HSP 1 Score: 209 bits (532), Expect = 1.600e-57 Identity = 134/334 (40.12%), Postives = 181/334 (54.19%), Query Frame = 3
Query: 666 CSLRGLVWKVLLGTIH-TDSMLYIRLVAKGPSTEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAVDTARRGSEGRGRGGSGSNEKHGGEEQPPKSEDVPRCSNSAIVEKEGAGAXXXXXXXXXXXXTGEGQERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPRYVAANLDGVHAGCALVDRVLSMVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQCVSLRDTLLQ-DPNPYRHLNARNLPPLDAELLVSMAFSLIPHLPSEMMDEIAQHPF 1661
CSLRG VWK LG + D Y LV +G S D IR DTFRTF D EF +RV E+KL R+ N ++ + G +P GEE K ED N + A G+ R YVQGM VLCAPLL+V+PE DA++ F L+ +H P Y+A L GV GCALVD+ L +DP L+ +L S+ +TA IYA PL++SL ACVPPL E +++WD +F+ GVH V++ VA V LR+ LL+ D + + L+ R PPL ++LL+S+A L+ LP +++ EIA+HPF
Sbjct: 63 CSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDLEFAQRVPEEKLVRLLNVFI---NELGSSP-----------------------------GEE---KQEDGDNARNGNLPSIRWV-AFAFWQNNVFFFFNKVGRSR--------YVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCPHYMAPQLKGVEKGCALVDKCLQTLDPDLYQHLSSRGITARIYALPLILSLFACVPPLHELLRVWDVLFAVGVHFVVVLAVAHTVLLREQLLKMDMDLMKVLSLRCAPPLQSDLLISVALQLLHRLPEDLLYEIARHPF 352
BLAST of mRNA_Ecto-sp13_S_contig6284.17022.1 vs. uniprot
Match: A0A024GJW3_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GJW3_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.430e-55 Identity = 128/335 (38.21%), Postives = 184/335 (54.93%), Query Frame = 3
Query: 666 CSLRGLVWKVLLGTIHTDSML----YIRLVAKGPSTEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAVDTARRGSEGRGRGGSGSNEKHGGEEQPPKSEDVPRCSNSAIVEKEGAGAXXXXXXXXXXXXTGEGQERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPRYVAANLDGVHAGCALVDRVLSMVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQCVSLRDTLLQ-DPNPYRHLNARNLPPLDAELLVSMAFSLIPHLPSEMMDEIAQH 1655
CSLRG VWK LLG T SM+ Y +V +GPS D IR DTFRTF DE F +V E L+ + NA++ T ++ A+ +E + R + +I E A +YVQGM +LC P L+VMPE DA+Y F+ LL +H PRY+A L GV AGCAL+D+ L ++DP LF +L +K +TA IYA P+++SL AC+PPL++ +++WD +F+ GVH VL+ V+ + LR+ LLQ D + + L+ R PPL A+LL+S+AF ++ LP E++ +IA+H
Sbjct: 207 CSLRGRVWKALLGV--TPSMINVSKYTEIVQQGPSFFDADIRNDTFRTFRGDEAFAEKVPEAHLATLLNAFI-------------TQHLERAKSSKA---------------KEDDDRETSRVRYISFSIFEPVPADFQREPSLF-------------------IYVQGMNILCGPFLYVMPECDAYYSFSQLLTRHCPRYMAPQLKGVEAGCALMDQCLEILDPELFEHLHAKGITARIYALPMILSLFACMPPLKQLLRVWDTLFAIGVHFVVLLAVSHALLLREQLLQRDTDLMKILSVRYAPPLRADLLLSVAFQILHRLPDELLYKIARH 492
BLAST of mRNA_Ecto-sp13_S_contig6284.17022.1 vs. uniprot
Match: A0A3M6VHR9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHR9_9STRA) HSP 1 Score: 201 bits (511), Expect = 2.240e-54 Identity = 132/353 (37.39%), Postives = 179/353 (50.71%), Query Frame = 3
Query: 666 CSLRGLVWKVLLGTIH-TDSMLYIRLVAKGPSTEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAVDTARRGSEGRGRGGSGSNEKHGGEEQPPKSEDVPRCSNSAIVEKEGAGAXXXXXXXXXXXXTGEGQERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPRYVAANLDGVHAGCALVDRVLSMVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQCVSLRDTLLQ--------------------DPNPYRHLNARNLPPLDAELLVSMAFSLIPHLPSEMMDEIAQHPF 1661
CSLRG VWK LG + D Y LV +G S D IR DTFRTF D EF +RV E+KL R+ N ++ D G + EG+ HGG N ++ E + YVQGM VLCAPLL+V+PE DA++ F L+ +H P Y+A L GV GCALVD+ L +DP L+ +L + +TA IYA PL++SL ACVPPL E +++WD +F+ GVH V++ VA V LR+ LLQ D + + L+ R +PPL ++LLVS+A L+ LP +++ EIA+HPF
Sbjct: 52 CSLRGRVWKAFLGVENDVDMTKYAALVGRGASHYDGDIRNDTFRTFRGDPEFAQRVPEEKLVRLLNVFINELGSDPGD-----------EKQIEGK--------HAHGG--------------NLPLIRFENKSKNKSVEVVKMIFLS--------------YVQGMNVLCAPLLYVLPEPDAYHTFCQLIVRHCPHYMAPQLKGVEKGCALVDKCLQTLDPELYQHLLKRGITARIYALPLILSLFACVPPLHELLRVWDVLFAVGVHFVVVLAVAHTVLLREQLLQLYSANTDTKHLCFCYFDTKRDMDLMKVLSLRCVPPLQSDLLVSVALQLLHRLPEDLLYEIARHPF 357
BLAST of mRNA_Ecto-sp13_S_contig6284.17022.1 vs. uniprot
Match: A0A0L0HQ64_SPIPD (Rab-GAP TBC domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HQ64_SPIPD) HSP 1 Score: 199 bits (505), Expect = 1.470e-53 Identity = 120/334 (35.93%), Postives = 162/334 (48.50%), Query Frame = 3
Query: 666 CSLRGLVWKVLLGTIHTDSMLYIRLVAKGPSTEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAVDTARRGSEGRGRGGSGSNEKHGGEEQPPKSEDVP--RCSNSAIVEKEGAGAXXXXXXXXXXXXTGEGQERVGDGGKGLYVQGMMVLCAPLLFVMPEVDAFYCFNSLLNQHMPRYVAANLDGVHAGCALVDRVLSMVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQCVSLRDTLLQDPNPYRHLNARNLPPLDAELLVSMAFSLIPHLPSEMMDEIAQHPF 1661
CSLRG +WKVLLG S Y L+ +GPS+ KI+ DTFRT D+ F +V E+ LSR+ NA+V K ED+P R N YVQGM VL AP L+VMPE+DAFY F + + P YV L+GVH G L+DR L + DP L+ YL+SK LTA +YAFP VM+ AC PPL + + LWD S+G+HL +L ++Q + +RD ++ P+P R L R P L+A+ LV+ L+P LP ++ D + +H F
Sbjct: 155 CSLRGRIWKVLLGIYRLSSFEYFNLIERGPSSVYDKIKNDTFRTLATDKNFLSKVDENMLSRVLNAFVW--------------------------------------------KMEDLPPSRLLNLTYT----------------------------------YVQGMNVLAAPFLYVMPELDAFYTFTAFIQHACPLYVQPALEGVHCGLKLLDRCLQVCDPSLYRYLKSKRLTATVYAFPSVMTFSACTPPLTQLLPLWDFYLSYGIHLNILCIISQIILIRDQIMSHPSPMRLL--RTFPDLNAKELVAHTVGLVPRLPEDLYDMLVRHTF 408
BLAST of mRNA_Ecto-sp13_S_contig6284.17022.1 vs. uniprot
Match: A0A0H2RPC8_9AGAM (Rab domain-containing cell division control protein n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2RPC8_9AGAM) HSP 1 Score: 192 bits (487), Expect = 3.450e-52 Identity = 116/332 (34.94%), Postives = 167/332 (50.30%), Query Frame = 3
Query: 669 SLRGLVWKVLLGTIHTDSMLYIRLVAKGPSTEDVKIREDTFRTFPRDEEFRRRVHEDKLSRINNAYVRLNHPDGGAPVAATAAVDTARRGSEGRGRGGSGSNEKHGGEEQPPKSEDVPRCSNSAIVEKEGAGAXXXXXXXXXXXXTGEGQERVGDGGKGLYVQGMMVLCAPLLFVMP-EVDAFYCFNSLLNQHMPRYVAANLDGVHAGCALVDRVLSMVDPVLFNYLESKFLTANIYAFPLVMSLHACVPPLEEAVKLWDAVFSFGVHLEVLVCVAQCVSLRDTLLQDPNPYRHLNARNLPPLDAELLVSMAFSLIPHLPSEMMDEIAQHPF 1661
+LR +WK+LLG + Y+R V +GP KIR DTFRT D F+ RV ED L R+ +A+V N E V ++I GA YVQGM VL AP L+ MP E++AF+CF+ + P YV L+GVH G L+DR L +VD L++ L SK L+A IYAFP VM+L AC PPL++ ++LWD + +FGVHL VL +AQ + +R+ L+ +P + L R PPL+A+L++ +A +L+ +P+++ DE+ +HPF
Sbjct: 60 NLRPKIWKILLGVNDLSADKYLRYVGRGPCEFKEKIRNDTFRTLATDRGFKERVREDMLVRLLDAFVWRNQ-------------------------------------------ERVEEADTASIAAGGSIGADDQMLAFT-------------------YVQGMNVLAAPFLYTMPSEIEAFFCFSHFIENSCPLYVQQTLEGVHRGLKLLDRCLKIVDSELYDRLRSKRLSAEIYAFPSVMTLCACTPPLDQVLQLWDFLLAFGVHLNVLCVIAQLLLMREDLMTSTSPMKLL--RTFPPLEAQLVIGIAVTLVRDIPADLYDELVRHPF 327 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6284.17022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6284.17022.1 >prot_Ecto-sp13_S_contig6284.17022.1 ID=prot_Ecto-sp13_S_contig6284.17022.1|Name=mRNA_Ecto-sp13_S_contig6284.17022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=607bp MGTSSPAVVDVFRCIESIEKRRSEVGTNGSGGSGAKDEARRGKRRSQAADback to top mRNA from alignment at Ecto-sp13_S_contig6284:2667..6614- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6284.17022.1 ID=mRNA_Ecto-sp13_S_contig6284.17022.1|Name=mRNA_Ecto-sp13_S_contig6284.17022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6284:2667..6614- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6284:2667..6614- >mRNA_Ecto-sp13_S_contig6284.17022.1 ID=mRNA_Ecto-sp13_S_contig6284.17022.1|Name=mRNA_Ecto-sp13_S_contig6284.17022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1821bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6284:2667..6614- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |