prot_Ecto-sp13_S_contig6271.17007.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6271.17007.1
Unique Nameprot_Ecto-sp13_S_contig6271.17007.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length110
Homology
BLAST of mRNA_Ecto-sp13_S_contig6271.17007.1 vs. uniprot
Match: D8LQR2_ECTSI (Lrc5, mitochondrial YqeH-related GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR2_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 4.710e-66
Identity = 107/109 (98.17%), Postives = 108/109 (99.08%), Query Frame = 0
Query:    1 MLSEHVGKGQMIFPPFDQERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTVRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKGRKKQGRRA 109
            MLSEHVGKGQMIFPPFD ERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVT+RVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKGRKKQGRRA
Sbjct:  630 MLSEHVGKGQMIFPPFDPERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTLRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKGRKKQGRRA 738          
BLAST of mRNA_Ecto-sp13_S_contig6271.17007.1 vs. uniprot
Match: A0A835YJZ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJZ8_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.130e-34
Identity = 56/107 (52.34%), Postives = 85/107 (79.44%), Query Frame = 0
Query:    2 LSEHVGKGQMIFPPFDQERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTVRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKGRKKQGRR 108
            + +H+G  +++FPPF +ER  ELGP+V ++F ++G GWR +  D+V++GLGW+SVTGAG   V+V AP+ +LV+ R+PL+P+E+W+TT+ FTG  TVK+G+K QGRR
Sbjct:  420 IDKHMGS-KLLFPPFSKERYQELGPMVSSEFTVVGEGWRRAGPDIVLSGLGWISVTGAGECAVKVTAPKDILVLTRDPLMPFEAWDTTSTFTGTRTVKRGKKTQGRR 525          
BLAST of mRNA_Ecto-sp13_S_contig6271.17007.1 vs. uniprot
Match: A0A7S4NA62_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NA62_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.770e-27
Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    9 GQMIFPPFD--QERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTVRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKGRK 103
            G M+ PPF+  Q+R+DE+G   P D  I GAGW+E+AAD+ + GLGWVSVTGAG   VR+  PRGV +  R PL+P++ WE TA++TGG  V+KG K
Sbjct:  567 GGMLTPPFEPGQKRMDEIGEFEPHDVVIEGAGWKEAAADIALRGLGWVSVTGAGVANVRISVPRGVGISVRPPLMPFDIWEATARYTGGRAVRKGGK 663          
BLAST of mRNA_Ecto-sp13_S_contig6271.17007.1 vs. uniprot
Match: A0A4D9D9J5_9STRA (G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9J5_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.590e-26
Identity = 55/103 (53.40%), Postives = 70/103 (67.96%), Query Frame = 0
Query:    2 LSEHVGKGQMIFPPFDQERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTVRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKGRKK 104
            L  H+G  +++ PPF QER   +GP V  DF+I G GW+ SA D+VI+GLGW+SVTGA    VRV AP  V V  R PL+PYE+W TTAK+TG   VK  ++K
Sbjct:  756 LDSHLG--ELVSPPFTQERRAAMGPWVSRDFEIEGTGWKTSAVDIVISGLGWISVTGALNCKVRVMAPEAVGVRLRSPLMPYETWATTAKWTGLRAVKSDKQK 856          
BLAST of mRNA_Ecto-sp13_S_contig6271.17007.1 vs. uniprot
Match: A0A7S2W145_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W145_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.270e-25
Identity = 49/110 (44.55%), Postives = 73/110 (66.36%), Query Frame = 0
Query:    2 LSEHVGKGQMIFPPFDQ--ERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTVRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKK-GRKKQGRR 108
            L  H G   MI PP D   ER++++G     D ++ GAGW+E+ AD+ + G+GWV+VTGAG   VRV  P+G+ +  R PL+P++ W  TA++TGG +V+K G+ K G+R
Sbjct:   94 LQTHAGN--MITPPLDPGPERMEQIGEFEHHDIEVDGAGWKEAGADITLRGIGWVAVTGAGTAKVRVSVPKGIGISVRPPLMPFDVWAATARYTGGRSVRKSGKSKSGKR 201          
BLAST of mRNA_Ecto-sp13_S_contig6271.17007.1 vs. uniprot
Match: A0A7S2LA52_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LA52_9STRA)

HSP 1 Score: 107 bits (266), Expect = 4.670e-25
Identity = 48/103 (46.60%), Postives = 72/103 (69.90%), Query Frame = 0
Query:    3 SEHVGKGQMIFPPFD--QERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTVRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKGRK 103
            S+HVGK  ++ PP +  QER++E+G     + D+ G GW+++AAD+ + GLGWV+VTGAG   VR+  P+G+ +  R PL+P++ WE TAK+TGG  V+K  K
Sbjct:  330 SKHVGK--ILTPPLEPGQERLEEIGEFEYHEIDVKGEGWKQAAADITLRGLGWVAVTGAGVAKVRIGVPKGIGITVRPPLMPFDVWEATAKYTGGRAVRKSTK 430          
BLAST of mRNA_Ecto-sp13_S_contig6271.17007.1 vs. uniprot
Match: K0T5S6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T5S6_THAOC)

HSP 1 Score: 107 bits (268), Expect = 5.250e-25
Identity = 50/110 (45.45%), Postives = 78/110 (70.91%), Query Frame = 0
Query:    2 LSEHVGKGQMIFPPFD--QERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTVRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKK-GRKKQGRR 108
            +S HVGK  ++ PP +  Q R++E+G     + ++ G GW+++AAD+ + GLGWV+VTGAG   VR+  P+G+ V  R PL+P++ WETTAK+TGG +V+K G+ + G+R
Sbjct:  499 ISSHVGK--LLTPPLEPGQARLEEIGEFEYHEIEVQGEGWKQAAADITLRGLGWVAVTGAGRAKVRIGVPKGIGVSLRPPLMPFDVWETTAKYTGGRSVRKSGKSRTGKR 606          
BLAST of mRNA_Ecto-sp13_S_contig6271.17007.1 vs. uniprot
Match: A0A7S3YK74_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YK74_HETAK)

HSP 1 Score: 100 bits (249), Expect = 5.160e-24
Identity = 50/109 (45.87%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    1 MLSEHVGKGQMIFPPFDQERVDELGPLVPT-DFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTVRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKGRKKQGRR 108
            +L +H+G   ++FPPF +ER   L     T DF I G GW ++A D+ I+GLG++ VTGAG   VR+ AP+ V+V+ R+ L+PY++ ++T+KFTGG  V+K + K GRR
Sbjct:  117 VLEKHMGT--LVFPPFTEERYKTLNAETSTHDFVIEGVGWNKAAQDIHISGLGFIGVTGAGKCKVRITAPKNVMVLLRDALMPYDTRDSTSKFTGGRVVRKQKGKGGRR 223          
BLAST of mRNA_Ecto-sp13_S_contig6271.17007.1 vs. uniprot
Match: A0A7S0VUH3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VUH3_9CRYP)

HSP 1 Score: 97.4 bits (241), Expect = 1.140e-23
Identity = 50/98 (51.02%), Postives = 63/98 (64.29%), Query Frame = 0
Query:    4 EHVGKGQMIFPPFDQERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTVRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKG 101
            +HVG   +I PPF +ER+DE+GPL  T+    G  +  S  DV+ AGLGWVS+TG G V +  WAP GV VM R PL+P+E+  TT  FTG    KKG
Sbjct:   31 KHVGG--LIKPPFTEERLDEIGPLSKTELWAEGITFERSCVDVIFAGLGWVSLTGIGRVDINAWAPEGVGVMTRLPLMPFEALSTTESFTGAE--KKG 124          
BLAST of mRNA_Ecto-sp13_S_contig6271.17007.1 vs. uniprot
Match: B8BY71_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY71_THAPS)

HSP 1 Score: 96.7 bits (239), Expect = 2.620e-23
Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = 0
Query:    3 SEHVGKGQMIFPPFDQ--ERVDELGPLVPTDFDIMGAGWRESAADVVIAGLGWVSVTGAGPVTVRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKKGRK 103
            ++HVG   ++ PP +   ER+ ++G       +I G GW+++AAD+ + GLGWV+VTGAG   VRV  P+GV V  R PL+P++ WE TAK+TGG  V+K  K
Sbjct:   36 AKHVGT--LLTPPLEPGPERMKDIGEFEYHTINIDGDGWKQAAADITLRGLGWVAVTGAGRAQVRVGVPKGVGVSVRPPLMPFDVWEATAKYTGGRAVRKSSK 136          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6271.17007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQR2_ECTSI4.710e-6698.17Lrc5, mitochondrial YqeH-related GTPase n=1 Tax=Ec... [more]
A0A835YJZ8_9STRA1.130e-3452.34P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4NA62_9STRA2.770e-2754.64Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A4D9D9J5_9STRA2.590e-2653.40G domain-containing protein n=2 Tax=Monodopsidacea... [more]
A0A7S2W145_9STRA2.270e-2544.55Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2LA52_9STRA4.670e-2546.60Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0T5S6_THAOC5.250e-2545.45Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3YK74_HETAK5.160e-2445.87Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0VUH3_9CRYP1.140e-2351.02Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
B8BY71_THAPS2.620e-2345.63Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46434:SF1GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIALcoord: 8..103
NoneNo IPR availablePANTHERPTHR46434FAMILY NOT NAMEDcoord: 8..103
NoneNo IPR availableTMHMMTMhelixcoord: 46..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6271contigEcto-sp13_S_contig6271:2108..3074 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6271.17007.1mRNA_Ecto-sp13_S_contig6271.17007.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6271 2093..3074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6271.17007.1 ID=prot_Ecto-sp13_S_contig6271.17007.1|Name=mRNA_Ecto-sp13_S_contig6271.17007.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=110bp
MLSEHVGKGQMIFPPFDQERVDELGPLVPTDFDIMGAGWRESAADVVIAG
LGWVSVTGAGPVTVRVWAPRGVLVMAREPLLPYESWETTAKFTGGSTVKK
GRKKQGRRA*
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