mRNA_Ecto-sp13_S_contig6269.16999.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6269.16999.1
Unique NamemRNA_Ecto-sp13_S_contig6269.16999.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6269.16999.1 vs. uniprot
Match: D7G457_ECTSI (Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G457_ECTSI)

HSP 1 Score: 617 bits (1592), Expect = 1.380e-218
Identity = 310/317 (97.79%), Postives = 313/317 (98.74%), Query Frame = 1 
Query:    1 MSSGGGAVELIPADEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERKLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTKEGYRTLTPRNYIPYFKQHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEGPMHREGVAFRQRAGS 951
            MSSGGGAVELIPADEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANER+LGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMT+EGYRTLTPRNYIPYFK+HNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEG MHREG AFRQR  S
Sbjct:    1 MSSGGGAVELIPADEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERRLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTREGYRTLTPRNYIPYFKKHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEGTMHREGFAFRQRVRS 317
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6269.16999.1 vs. uniprot
Match: W7T2L2_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T2L2_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 1.220e-128
Identity = 183/300 (61.00%), Postives = 222/300 (74.00%), Query Frame = 1 
Query:   40 DEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERKLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTKEGYRTLTPRNYIPYFKQHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEGPMHREGVAFRQ 939
            +E  YWNFFLD+GPL+L  L+RFC+ LN KL +E    K +Y Y G HAHKRTNAA L+ AW ++Y  R+P++AF PF  V   FPPFHDASPC+CT+ L I  CLKG+ KAR ++FF               VENGDLNW+V GKFLAFAGP +  E++ EGY TLTP NY  YF + NV LV+RLNKKYYDE  F   GI HLE Y+LDGS+P  ++++ F+ ACE TPGA+AVHCKAGLGRTGTCI CY+MKHY FTAAE IGW+R+CRPGS+IGPQQHYLE+ME  M R+G A+RQ
Sbjct:   41 NELIYWNFFLDFGPLNLAQLYRFCQRLNSKLKSESLRDKIIYYYCGLHAHKRTNAALLMAAWSMIYLDRSPKEAFEPFCKVSSSFPPFHDASPCLCTYPLSILDCLKGIAKARFYNFFDFCRFNVEEYEHFEQVENGDLNWIVQGKFLAFAGPQNNRELSPEGYYTLTPENYAGYFLKRNVQLVIRLNKKYYDETKFTSLGIKHLELYYLDGSIPTNAILQTFLKACEETPGAIAVHCKAGLGRTGTCIACYLMKHYRFTAAEAIGWLRVCRPGSIIGPQQHYLEEMEQVMWRQGDAYRQ 340
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6269.16999.1 vs. uniprot
Match: A0A835YPR9_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPR9_9STRA)

HSP 1 Score: 385 bits (990), Expect = 1.600e-126
Identity = 179/285 (62.81%), Postives = 214/285 (75.09%), Query Frame = 1 
Query:   40 DEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERKLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTKEGYRTLTPRNYIPYFKQHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLE 894
            +E  YWNFFLD+GPLSLG L+RFC+ LN KL +     K +Y YSG H H+R NA+ L+TAW +LY  RTPE+A  PF+ +    P FHDASPCVCT+ L +  CL+GL+KAR   FF               VE+GDLNW+V+GKFLAFAGP  RS +T EGYRTLTP ++IPYFK+HNVTLV+RLNKKYYDE  F  AGI H E Y+LDGSVP  S++ +F+  CE TPGAVAVHCKAGLGRTGTCIGCY+MKHY  TAAE IGWMR+CRPGSVIGPQQH+++
Sbjct:    9 NELVYWNFFLDFGPLSLGQLYRFCQGLNTKLRDASLRDKVIYFYSGVHPHRRANASLLITAWTVLYLHRTPEEALLPFRYIIQSLPAFHDASPCVCTYQLRVIDCLRGLEKARRHRFFDFENFNLLSYEHYEQVEHGDLNWIVEGKFLAFAGPCERSSITPEGYRTLTPDDFIPYFKKHNVTLVIRLNKKYYDETKFTRAGIAHAELYYLDGSVPSHSILSRFLELCERTPGAVAVHCKAGLGRTGTCIGCYLMKHYHMTAAEAIGWMRVCRPGSVIGPQQHFMQ 293
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6269.16999.1 vs. uniprot
Match: F0XVY6_AURAN (Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVY6_AURAN)

HSP 1 Score: 375 bits (963), Expect = 1.520e-123
Identity = 170/300 (56.67%), Postives = 216/300 (72.00%), Query Frame = 1 
Query:   40 DEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERKLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTK-EGYRTLTPRNYIPYFKQHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEGPMHREGVAFR 936
            D   YWNFFLD+GPL+LG L+RFC  LN KL +     K +Y YS +H H R NAAFL+ AW +LY GR+PE A+ P  D  P +PPFHDASPC CT+D+ + HCLKGL KAR F+FF               VENGDLNW+V+GKF AFAGPH R+  +  +GY+TL P +Y  YF++ NV L+VRLNK YY++  F+  G DH++ Y+LDGS PP  ++++F+A  E   GA+ VHCKAGLGRTGTCIGCY MKHY FTAAE+IGWMR+CRPGSVIGPQQH++++ME  + +EG  +R
Sbjct:    5 DTLVYWNFFLDFGPLNLGQLYRFCTMLNAKLQSPELRDKVIYYYSSSHPHARANAAFLMGAWQVLYLGRSPEDAWKPLGDYGPDYPPFHDASPCACTYDVTVLHCLKGLHKARRFNFFNFDAFDLAEYEHFEAVENGDLNWIVEGKFFAFAGPHDRNRSSNLDGYQTLAPEDYGAYFQRKNVGLIVRLNKPYYNKSKFIQMGADHIDLYYLDGSNPPMRILKKFLAVAEQATGAIGVHCKAGLGRTGTCIGCYCMKHYKFTAAEIIGWMRVCRPGSVIGPQQHFMQEMEQTLWQEGDLYR 304
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6269.16999.1 vs. uniprot
Match: A0A2R5GCL2_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCL2_9STRA)

HSP 1 Score: 371 bits (952), Expect = 3.030e-120
Identity = 174/303 (57.43%), Postives = 219/303 (72.28%), Query Frame = 1 
Query:   40 DEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERKLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTKEGYRTLTPRNYIPYFKQHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEGPMHREGVAFRQRAG 948
            DE  YWNFF D+GPL+LG LFRFC+ LN  LA+ +  GK +Y YS +++ KR NAAFL++ + ++Y GRTPE+A+APF +V PPFPPFHDA+P  CT+ L +  CL+G+ KA   +FF               VE GDLNW++  KFLAFAGPH R   T+EGY TLTP +YIPYFK+ NVTLV+RLN+K YDE  F  AGI HL+  + DG+ PP  ++++FI ACE   GA+AVHCKAGLGRTGTCIG YIMKH+  TAAE IGW+R+CRPGS+IGPQQ ++E ME  M  EG  F+QR G
Sbjct:   41 DELVYWNFFKDFGPLNLGQLFRFCQILNELLADPKLRGKCIYYYSSSNSQKRANAAFLISCYAMIYLGRTPEEAYAPFINVHPPFPPFHDATPFECTYKLSVLDCLQGVYKAMQHNFFNFSTFDVEEYEHFEQVEAGDLNWIMPNKFLAFAGPHDRRMRTREGYDTLTPEHYIPYFKRRNVTLVIRLNRKCYDEKRFERAGIRHLDLVYPDGTCPPDHILKRFIEACENNDGAIAVHCKAGLGRTGTCIGAYIMKHFGMTAAETIGWIRVCRPGSIIGPQQQFMEHMEPIMRHEGKRFQQRGG 343
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6269.16999.1 vs. uniprot
Match: A0A7S1B7L7_9STRA (Protein-tyrosine-phosphatase n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B7L7_9STRA)

HSP 1 Score: 362 bits (928), Expect = 5.540e-117
Identity = 167/309 (54.05%), Postives = 218/309 (70.55%), Query Frame = 1 
Query:   40 DEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERKLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTKEGYRTLTPRNYIPYFKQHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEGPMHREGVAFRQRAGSCTSTR 966
            +E  YWNFFLD+GPL+LG L+RFC  LN K+ + +   K +Y + G    KR NAA L+ +W +LY GRTP++A+  F+     FPPFHDASPCVCT+ L +  CL+GL KA+ ++FF               VENGDLNW+++ K LAFAGPH  + ++KEGYRTL P +YIPYFK  NV LV+RLNKKYYDE  F+DAGI+H E Y+LDGSVPP  ++++ +   +   GA+A+HCKAGLGRTGTCIG ++MKHY FTAAE IGWMRICRPGSVIGPQQ +++++E  M  EG   + +     S+R
Sbjct:   45 NELVYWNFFLDFGPLNLGQLYRFCTLLNSKMTDPKLSKKIIYFFCGAEGTKRANAAMLICSWQILYMGRTPDEAYEEFRGAI--FPPFHDASPCVCTYKLSVLDCLRGLAKAKMYNFFNFEKFDVQEYEYFEQVENGDLNWIIENKILAFAGPHYTNSLSKEGYRTLIPGDYIPYFKSKNVKLVIRLNKKYYDEVKFIDAGINHFEQYYLDGSVPPKKILKRILREMDKCDGAMAIHCKAGLGRTGTCIGAWMMKHYKFTAAEAIGWMRICRPGSVIGPQQQFMKEIEQEMWHEGDIMKNKPSKGLSSR 351
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6269.16999.1 vs. uniprot
Match: A0A5A8DCV7_CAFRO (Protein-tyrosine-phosphatase n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8DCV7_CAFRO)

HSP 1 Score: 357 bits (915), Expect = 8.800e-114
Identity = 173/304 (56.91%), Postives = 210/304 (69.08%), Query Frame = 1 
Query:   37 ADEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERKLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTKEGYRTLTPRNYIPYFKQHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEGPMHREGVAFRQRAG 948
            A  F+YWNFFLD+GPL+LG L+RFC+ ++ KL + R  GK + V++G +A +R N+A  +  + LLY G TPEQA+ PF  + PPFPPFHDASPCVC + L IPH +  +QKAR  +FF               VENGDL+W+V G+F AFAGPH     T EGY TL P +YIP+FK+  V  VVRLNK YY    F +AGI H   Y+LDGS  PPS++  FI  CE T GA+AVHCKAGLGRTGTCIG YIMKHY FTAAEVI W+RICRPGSVIGPQQ YLE ++  M   G A+R R G
Sbjct:   42 APRFAYWNFFLDFGPLNLGQLYRFCQIMSNKLRDGRYAGKRIVVWAGANAAQRANSACCMALYSLLYLGMTPEQAWEPFSPIRPPFPPFHDASPCVCPYKLTIPHVISAVQKARECNFFDFDTFNVEEYESFEQVENGDLSWIVQGRFCAFAGPHESRTTTPEGYVTLCPEDYIPHFKRWGVQAVVRLNKPYYAARRFTEAGIAHHHMYYLDGSNAPPSILDTFIRNCEETEGAIAVHCKAGLGRTGTCIGSYIMKHYRFTAAEVIAWLRICRPGSVIGPQQQYLESLQASMWAAGDAYRARHG 345
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6269.16999.1 vs. uniprot
Match: A0A7S4A861_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A861_9STRA)

HSP 1 Score: 351 bits (900), Expect = 8.550e-113
Identity = 165/299 (55.18%), Postives = 205/299 (68.56%), Query Frame = 1 
Query:   40 DEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERKLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTKEGYRTLTPRNYIPYFKQHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEGPMHREGVAFR 936
            D   YWNFFLD+GPL+LG L+RFC  LN KL       + +Y YS +    R+NAA L+  W +LY  RTPE+A+AP    +  + PFHDASPC CT+D+ +  CLKGL KAR  +FF               VE+GDLNWLV G+F AFAGPH        GY TL P +Y+PYFK  NV+L+VRLNK YYD   FL  GIDH++ Y+LDGS PP  ++R+F+  CE T GA+ VHCKAGLGRTGTCIGCY MKH+ FTAAE+I W RICRPGSVIGPQQH++++ME  + +EG AF+
Sbjct:   36 DALVYWNFFLDFGPLNLGQLYRFCALLNQKLRAPELSERPIYYYSSSDPRARSNAAVLIGCWQILYLQRTPEEAWAPLS-TYGRYAPFHDASPCACTYDVTVLDCLKGLHKARACNFFDFDAFDLNEYEHFEAVEHGDLNWLVYGRFFAFAGPHDAHRNPHTGYETLAPEDYVPYFKSRNVSLIVRLNKPYYDRQKFLKNGIDHVDMYYLDGSNPPIKILRKFLEVCEQTTGAIGVHCKAGLGRTGTCIGCYCMKHHKFTAAEIIAWFRICRPGSVIGPQQHFMQEMERVLWQEGEAFK 333
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6269.16999.1 vs. uniprot
Match: A0A7S3PJW5_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJW5_9STRA)

HSP 1 Score: 345 bits (885), Expect = 3.300e-110
Identity = 163/299 (54.52%), Postives = 209/299 (69.90%), Query Frame = 1 
Query:   40 DEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERKLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTKEGYRTLTPRNYIPYFKQHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEGPMHREGVAFR 936
            DE  YWNF+LD+GPL+LG L+RFC  L   L +     K ++ YS T + KR NAAFL++A+ ++Y  RTPE+AF PF+   PPFPPFHDA+P  CT++L IP CL GL +A    +F               VENGD NWLV  KFLAFAGP        +GY TLTP +YIPYFK++ VTLV+RLN+K YDE  F+  GI H++ ++ DGS PP S++++F+  CE   GA+AVHCKAGLGRTG+CIGCY+MKH+  TAA+ IGWMRI RPGSVIGPQQH+L++ E  MH+EG  +R
Sbjct:   44 DELEYWNFYLDFGPLNLGQLYRFCVILLDILKDPALENKKIFYYSSTQSDKRANAAFLISAFAMIYLNRTPEEAFMPFRSS-PPFPPFHDATPIQCTYNLTIPDCLSGLCEAMKLKYFDFNQFNVEEYEHYERVENGDFNWLVQNKFLAFAGPFEMKRDIGDGYLTLTPEDYIPYFKKNGVTLVIRLNRKCYDEKRFIRHGIKHVDLFYPDGSNPPESILQKFLKVCEGEKGAIAVHCKAGLGRTGSCIGCYMMKHHGMTAAQAIGWMRIARPGSVIGPQQHFLQENEARMHQEGQRYR 341
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6269.16999.1 vs. uniprot
Match: A0A812YFB7_9DINO (Protein-tyrosine-phosphatase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YFB7_9DINO)

HSP 1 Score: 340 bits (872), Expect = 1.540e-107
Identity = 163/301 (54.15%), Postives = 206/301 (68.44%), Query Frame = 1 
Query:   52 YWNFFLDWGPLSLGNLFRFCRTLNFKLANERKLGKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPPFHDASPCVCTFDLFIPHCLKGLQKARHFSFFXXXXXXXXXXXXXXXVENGDLNWLVDGKFLAFAGPHSRSEMTKEGYRTLTPRNYIPYFKQHNVTLVVRLNKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVHCKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQMEGPMHREGVAFRQRAGSC 954
            YW FFLD+GPL+LG L+RFC  LN KL++ +   K +Y YS   + KR NA FLL+AW LLY G+TPE+A+ PF  ++PP PP+HDASP VCT++L +   LKG+ +A    FF                 NGDL+W+  GK LAFAGPH+    + +GY TLTP +YIP FK+  V LV+RLNKKYYDE  F+ AG+DHL+ Y+LDGS PP  ++   + A E   GA+A+HCKAGLGRTGTCI C++MKHY FTAAE I W+R+CRPGSVIGPQQH+LE M   M +EG A R  A   
Sbjct:   44 YWAFFLDFGPLNLGQLYRFCEYLNHKLSDPKLEKKHIYYYSSVASDKRANAVFLLSAWSLLYQGKTPEEAWEPFAGIYPPLPPWHDASPTVCTYNLTVLDTLKGIARAVQAGFFDFDTFPIEEYEHWEQPSNGDLSWIQYGKILAFAGPHNHRS-SHDGYYTLTPEDYIPQFKKWGVKLVIRLNKKYYDEERFIKAGMDHLDLYYLDGSNPPEHILATVMDAMERCDGAIAIHCKAGLGRTGTCIACHMMKHYGFTAAEAIAWLRVCRPGSVIGPQQHFLEDMMPRMVKEGQAMRAAAADA 343
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6269.16999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G457_ECTSI1.380e-21897.79Protein-tyrosine-phosphatase n=2 Tax=Ectocarpus Ta... [more]
W7T2L2_9STRA1.220e-12861.00Protein-tyrosine-phosphatase n=1 Tax=Nannochlorops... [more]
A0A835YPR9_9STRA1.600e-12662.81Protein-tyrosine-phosphatase n=1 Tax=Tribonema min... [more]
F0XVY6_AURAN1.520e-12356.67Protein-tyrosine-phosphatase (Fragment) n=1 Tax=Au... [more]
A0A2R5GCL2_9STRA3.030e-12057.43Protein-tyrosine-phosphatase n=1 Tax=Hondaea ferme... [more]
A0A7S1B7L7_9STRA5.540e-11754.05Protein-tyrosine-phosphatase n=3 Tax=Corethron hys... [more]
A0A5A8DCV7_CAFRO8.800e-11456.91Protein-tyrosine-phosphatase n=3 Tax=Sar TaxID=269... [more]
A0A7S4A861_9STRA8.550e-11355.18Protein-tyrosine-phosphatase n=1 Tax=Pelagomonas c... [more]
A0A7S3PJW5_9STRA3.300e-11054.52Protein-tyrosine-phosphatase n=1 Tax=Aplanochytriu... [more]
A0A812YFB7_9DINO1.540e-10754.15Protein-tyrosine-phosphatase n=1 Tax=Symbiodinium ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6269contigEcto-sp13_S_contig6269:654..7912 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score620.9
Seed ortholog evalue6e-175
Seed eggNOG ortholog2880.D7G457
Preferred nameCDC14A
Model size1767
KEGG koko:K06639
KEGG Pathwayko04110,ko04111,ko04113,map04110,map04111,map04113
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000022,GO:0000070,GO:0000075,GO:0000077,GO:0000212,GO:0000226,GO:0000228,GO:0000235,GO:0000278,GO:0000280,GO:0000281,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000793,GO:0000794,GO:0000819,GO:0000910,GO:0000922,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0004725,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005677,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005816,GO:0005818,GO:0005819,GO:0005826,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0005938,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007050,GO:0007051,GO:0007052,GO:0007059,GO:0007080,GO:0007088,GO:0007093,GO:0007096,GO:0007143,GO:0007154,GO:0007165,GO:0007276,GO:0007292,GO:0007346,GO:0008104,GO:0008138,GO:0008150,GO:0008152,GO:0008283,GO:0009607,GO:0009628,GO:0009719,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010389,GO:0010564,GO:0010604,GO:0010638,GO:0010646,GO:0010647,GO:0010948,GO:0010972,GO:0010973,GO:0015629,GO:0015630,GO:0016043,GO:0016311,GO:0016604,GO:0016787,GO:0016788,GO:0016791,GO:0017053,GO:0019222,GO:0019538,GO:0019953,GO:0022402,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030428,GO:0030496,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030869,GO:0031029,GO:0031031,GO:0031032,GO:0031323,GO:0031325,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031503,GO:0031536,GO:0031566,GO:0031570,GO:0031572,GO:0031974,GO:0031981,GO:0031991,GO:0032153,GO:0032155,GO:0032268,GO:0032270,GO:0032465,GO:0032467,GO:0032501,GO:0032504,GO:0032506,GO:0032879,GO:0032886,GO:0032887,GO:0032888,GO:0032954,GO:0032955,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033206,GO:0033365,GO:0033554,GO:0034501,GO:0034502,GO:0034613,GO:0034629,GO:0035335,GO:0035556,GO:0035853,GO:0036211,GO:0036212,GO:0040038,GO:0042578,GO:0042770,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043954,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044380,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044451,GO:0044452,GO:0044454,GO:0044464,GO:0044703,GO:0044732,GO:0044782,GO:0044837,GO:0044878,GO:0045184,GO:0045595,GO:0045786,GO:0045787,GO:0045840,GO:0045930,GO:0045931,GO:0046578,GO:0046579,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048609,GO:0050000,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051056,GO:0051057,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051225,GO:0051229,GO:0051230,GO:0051231,GO:0051233,GO:0051234,GO:0051246,GO:0051247,GO:0051255,GO:0051256,GO:0051276,GO:0051301,GO:0051302,GO:0051303,GO:0051310,GO:0051321,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0051987,GO:0051988,GO:0060236,GO:0060255,GO:0060271,GO:0060284,GO:0060341,GO:0061640,GO:0062033,GO:0065007,GO:0065009,GO:0070013,GO:0070507,GO:0070727,GO:0070925,GO:0070938,GO:0071214,GO:0071216,GO:0071459,GO:0071470,GO:0071495,GO:0071704,GO:0071840,GO:0071850,GO:0071944,GO:0071988,GO:0071989,GO:0072395,GO:0072396,GO:0072401,GO:0072414,GO:0072417,GO:0072422,GO:0072425,GO:0072476,GO:0072479,GO:0072485,GO:0072594,GO:0072686,GO:0072698,GO:0080090,GO:0090068,GO:0090224,GO:0090235,GO:0090307,GO:0090568,GO:0098687,GO:0098783,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0104004,GO:0110020,GO:0110028,GO:0120031,GO:0120036,GO:0120105,GO:0140013,GO:0140014,GO:0140096,GO:1901564,GO:1901891,GO:1901893,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902406,GO:1902410,GO:1902412,GO:1902423,GO:1902425,GO:1902440,GO:1902531,GO:1902533,GO:1902749,GO:1902750,GO:1902846,GO:1902850,GO:1903008,GO:1903046,GO:1903047,GO:1903320,GO:1903322,GO:1903436,GO:1903438,GO:1903490,GO:1904666,GO:1904668,GO:1904789,GO:1905508,GO:1990023,GO:1990598,GO:1990975,GO:2001252
Exons9
EggNOG free text desc.protein tyrosine/serine/threonine phosphatase activity
EggNOG OGsCOG2453@1,KOG1720@2759
EC3.1.3.16,3.1.3.48
Cds size1767
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6269.16999.1prot_Ecto-sp13_S_contig6269.16999.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6269 654..7912 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463870.6375878-CDS-Ecto-sp13_S_contig6269:653..14781681463870.6375878-CDS-Ecto-sp13_S_contig6269:653..1478Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6269 654..1478 -
1681463870.6748223-CDS-Ecto-sp13_S_contig6269:2398..24821681463870.6748223-CDS-Ecto-sp13_S_contig6269:2398..2482Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6269 2399..2482 -
1681463870.6995394-CDS-Ecto-sp13_S_contig6269:2888..29901681463870.6995394-CDS-Ecto-sp13_S_contig6269:2888..2990Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6269 2889..2990 -
1681463870.715245-CDS-Ecto-sp13_S_contig6269:3322..34871681463870.715245-CDS-Ecto-sp13_S_contig6269:3322..3487Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6269 3323..3487 -
1681463870.7252562-CDS-Ecto-sp13_S_contig6269:3896..40491681463870.7252562-CDS-Ecto-sp13_S_contig6269:3896..4049Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6269 3897..4049 -
1681463870.734513-CDS-Ecto-sp13_S_contig6269:4482..46621681463870.734513-CDS-Ecto-sp13_S_contig6269:4482..4662Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6269 4483..4662 -
1681463870.7433302-CDS-Ecto-sp13_S_contig6269:5147..52491681463870.7433302-CDS-Ecto-sp13_S_contig6269:5147..5249Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6269 5148..5249 -
1681463870.752658-CDS-Ecto-sp13_S_contig6269:5561..56811681463870.752658-CDS-Ecto-sp13_S_contig6269:5561..5681Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6269 5562..5681 -
1681463870.7630935-CDS-Ecto-sp13_S_contig6269:7876..79121681463870.7630935-CDS-Ecto-sp13_S_contig6269:7876..7912Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6269 7877..7912 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6269.16999.1

>prot_Ecto-sp13_S_contig6269.16999.1 ID=prot_Ecto-sp13_S_contig6269.16999.1|Name=mRNA_Ecto-sp13_S_contig6269.16999.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=589bp
MSSGGGAVELIPADEFSYWNFFLDWGPLSLGNLFRFCRTLNFKLANERKL
GKAVYVYSGTHAHKRTNAAFLLTAWLLLYGGRTPEQAFAPFQDVFPPFPP
FHDASPCVCTFDLFIPHCLKGLQKARHFSFFNFDTFDVEEYEHYEQVENG
DLNWLVDGKFLAFAGPHSRSEMTKEGYRTLTPRNYIPYFKQHNVTLVVRL
NKKYYDEGLFLDAGIDHLEAYFLDGSVPPPSVIRQFIAACEATPGAVAVH
CKAGLGRTGTCIGCYIMKHYSFTAAEVIGWMRICRPGSVIGPQQHYLEQM
EGPMHREGVAFRQRAGSCTSTRRASGVLPARREDQGERRAEQARSEAAAE
AQAEGTRAAKGSNNGKQAAREWGMTRQLGGRSRSSAGGGGFSRSSPSRDL
RLFACSLRPCEGGAVRGKGSPMKEEGTSTRRSNLDPDEQVARYGNTTTNS
RSNTRRKSTGQRQQAPPLSPLETGGRVERRGGSGRGAYERMATTQRARQT
GLRRASAPCGHAAEKSAAAMSAAAMVEEETSAASASAVAVAPDNRTSLDA
WDHMAAAGQRTGGKGGAGGWALGEITQGDLLRQQRSRR*
back to top

mRNA from alignment at Ecto-sp13_S_contig6269:654..7912-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6269.16999.1 ID=mRNA_Ecto-sp13_S_contig6269.16999.1|Name=mRNA_Ecto-sp13_S_contig6269.16999.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7259bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6269:654..7912- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTTCGGGTGGAGGCGCTGTGGAACTTATCCCGGTAAGTTGGAACAT
GACAAGCTGATGGCTGTTCGTCAGTGTGCTCGAAACAAGACGAGACGTAC
GGCCCGTCGAACTACTCGCGGCTACCATTACGCCTGCAACGCAAACTACT
TGCGCCTGCCGAGTCTGCTCTGCATTACAGCAGGCTGGTTGCGCCTTTCG
CAAGCCACATTACCCCATACCACGGCCACGACGCGCCACTCATGTACACA
AGGAGGAGCTGTCGGCTAATATGCTGGTTTCCCACGAGCTTAGTCGTTGC
TTCCTTCGTGGCGTACAAGTACCCAACAGCCAAATAGGTGATGCCCTATG
CTCAAGTTGAGGCAGAAGGTTTTCGATGGGGCACCACGATCGCGTGATTG
TTCACGCTTTATCATGAGATACGTTTGCCACAGATATTGAACAATTATTC
CCCCATGTGCCATACACGGCACTACATGTACTGTGTGCACCTAAAGACAT
GCACTCTGTGTCGTTGTACATTACACCGGAGCTGCTGCTGCACACGTGTT
TGTTTGCCGTTGTTACTAGCGGGAAAAGCGTATATTAGAAAACATCGCAT
AGAGACAGACCCCACGGGGCACTGTTCCCCGTCGATACAAATCACAGAGA
GTCATATATACCAGTAGTCTATGTTTATTTCTTACTTTTGTATATATGCA
CATGGCCTGGTCTCTGGCAAGTCCTGACGACATGGTAATAGTCTATCTGG
CGTGGTGGGGTGGGGTGTGGGTGAGAGGATCGGGTCTGACGTTTACGTTT
TATTTGAAAATGTGCTCAAAAACTCGAACTCCTTAGCATGAAGGTTCTGC
TTGTGTCTCAGCTTCCGAGTTAGAGCGAGTGGTACCAATACAAACAGCTT
CGTTCGAAATTTCATAGTTTCCCCGCCCTATGTACCCCACCCTCGAAAAC
TGTCATCGTTCGCCTCTGTGTTCCTTGTAGTGAAACGCGCTTGTGAGTAT
TCTTGGGAGAAGCTCGGCTGAATCCCTCTGGTGTGAAAGCCTTCAGGCCT
TACCCTGAGGGGTTTCATTAGGTGATTTCGGATCGGACCTCTCCAGTTGG
CGGTTTTGATGAGCGACGCGGTTACTTTATTATCGGGGTTTGAAGGCGAA
GCAGAAATCTAATTTCCGTATTGTGGACATGTTTCCATTATCCCACTGTG
GACTTAGTTTATGCACACCCTACAACCTTTTCTCACGAACTTTAAAACAT
CAATCAAGCATTACGCAGGAAAGTCTTCTGCGTCCTCGGCTTCAAGTCTT
CTACATATTTTCTACATGCGACTTCAATTCTTCGTGAGTGAGTCGTAGGA
CTCCCCCAACGTTTCTACATTCGGAAAACTTTGTCTGGGGGTTAGATTGT
GCGACAGGAAGGTGGTGTGTTTGCTGGGACGAGGGAAGAAGAGGAGTTGC
CAAAAACATGCAGGTTCAAGGGATATTCCCACAACATCATGTCCACAAAC
GTCAACCAAGATATAAAAAAGTTAGCTTCAAGCGCACTCTCTCCACGAGG
AGCAGTTGATGGTCAACTCGACAGCAATCAATCCCGCTTCGGGGCGCCGG
ACGACCTCTTTTCTGGAATTCTCTGTCTCTCGCCAACAGGGGAGGCTGTA
CTACGTGACGCTGAGATCAACTCCACCGGACAGCTCGAAGGAGACGTCGC
ACTTTTGGTCGGTGGGTCTCGATATGCCGAGTGTGTGGTAACTACAGTAG
AAGAATCACAGCAACAACGGTCGTAAATTAGCAGAACTCGTTGTCGTGGT
ACATCGACAGGAGGTGATCCATGGCATATTTTAGTGGGAGACGGCCCCAG
CAAACGACCTCTGCGGAATTTCGAACTCAAGTACATGAACAATCTTCCAT
TTCTACTGTAGTCTTCGTATCGGATTTACTTTTTGAAGCTGCCACCGGAA
TCCTGTTCACCTACGACGTAGGTTCGTGTCCAGGGCACAGCATTCGTGTC
GCTTGTCGACAACCCAAATCTACCTGCTTCACTGCCGCGGGCCAGTCGTC
GAGGAAATATTACCACTACCAAGCCTGATGCTAGGAGCACAGTCGGAACA
TACGCGGAGAAAATCCTCCTACCCTTGCGCCGCCTACCAATCCGGAGCAC
CCTTCCACCCTTGCACTCTGGCCCAATCATTCGATTGGATCGTTTTCACG
CCAAGTCAATACATGCTTGTTTCGCAAACAGGCTGACGAGTTTTCTTACT
GGAATTTTTTCCTAGACTGGGGACCGCTCTCCTTGGGTAACCTTTTCCGA
TTCTGCCGGACGCTGAACTTCAAGCTCGCGAACGAGAGGAAGCTTGGCAA
GGTGATCAACGTCCACCGGACGTTACAGAGTGTGTTGTCGTAACACCAGC
TACAATAGCTGGGAAAATGTTTGGCGTGCTTTCGTTGCTGTTGCCAAGGT
GTTCTTTTCGATTCCGCGAGTCTATCCGAAAAGACCGCTGGAAAGAAGAA
CCTGACGAAACTGGATTTGATCAGATAGGTGCTTGCGCCTCATCGCAGTC
CATTCCATCGACGACTAAGTGTCCGGACTCGATGCGTCTTCGCCTTGATC
TCACCGCTCCCTCCCCATCGTTTTTCGAAATCGTTACCCGTCCGCTACTG
CAATATCTTCCAGGCAGTGTACGTGTACTCCGGAACCCACGCCCACAAGC
GGACTAACGCAGCTTTCCTCCTAACCGCGTGGCTCCTGTTGTATGGTGGC
AGAACTCCAGAACAGGTAGTAGTTGCAAACTAGCGTCTTGTTGGGTGTTG
GTGGTTGGAGATGATGATCTTGAATAGACACCGATACCTTGGTTTGTTTA
TTTCGCGCGCCTGATATTACACCGGTATTGTCATGTAGGCCGAAAAATTT
CTCCACCATGCAGCCGAGGTTCAGTTTTGTACGAAATGCATGCCGTTTGA
TTCATCACGAACGCTACGATGATATTTGCATGGAGTAACACGCATTTGAG
GACGTCCACACGGCAGACGTGTTGCGGAAACTGCAGGGTGCCCTCGAAAA
CGACAAGTCACCCAATGCATCGGATTCCAAGCAACCGTCTCAGGGACTTT
CTCGGTACAGCGAACCCTCCCACGCTCAGATTTGTACCCAACCGCATGTT
CTTTGCATCACCAGGCCGGGCTCATCTACCCCCTGCGCTTTTTCACCCAG
CGGCCCCCACTCCTTCGTGCCATGACTGTGGTTTCTGTTTTTTCCTAAAG
GCGTTCGCACCATTTCAGGACGTGTTTCCACCGTTCCCGCCGTTCCACGA
CGCGTCGCCATGCGTCTGCACGTTCGACCTCTTCATCCCGCACTGTCTCA
AAGGTCTCCAGAAAGCTCGTCACTTCAGTTTCTTCAACTTCGACACCTTT
GACGTCGAAGAATACGAGCACTACGAGCAGGTCTGTCCGTGCGAGTTGCC
TTGCGCCTTCGAGCTTTGTCGAGTTAGAAGGCTCCCGTGGTAGCTAGTGG
GTGCCTGCCGTACGGCGGCGCCGTGTTATTTCGCTCCCGATTATTGGGTT
AGTACATCGTGGTCAGACGCTCGGTCGCAAGCAAGTGCAGCTGTGGTTTC
AACACGATTTTTTTACCCGAAGAGCGGACTGTCATCATAGGTATACTTGG
CGGGTACGTGTCCAGCGTACAGTAGTACCGGTTCTCTAGTGGGTACAGCC
CCTCAGAAGCGACAACTCATATAATGCTACACAAGGGGACAACATGAGGT
GCACGCGCAAGCTGCGCGCGATCGACGTCTCGTTACCTGTGGCAGAAATA
GAGGCTTGGCGACAATCATCGCCGGTGCCCCTGCCGTTGCGTCTTCGCCC
GAGCACCAACCAGGTCGAGAACGGCGACTTGAACTGGCTCGTCGACGGAA
AGTTCTTGGCATTCGCAGGGCCGCACAGTCGCTCTGAAATGACGAAAGAA
GGCTACCGGACGCTAACCCCACGGAACTACATTCCCTACTTCAAGCAACA
CAATGTCACGCTCGTGGTGAGTGAGAGCGTGATTCGAGGTTTCCTCCCTC
CCACCTCAGTCGAACGCGCTGTCATTCATGCCAAGATCTGACAAAAGACT
CCCATGCCCACGTTGTAGTTGATTTCCACAAACCTTCACATTATGTAGGT
TTCTTGTTTTAATGACACTCCTCCACAGGCTGTCCGCAAGGTGTGCCCGT
CCATTCACGACGAAAACTTTTTTCGAACAAATGAGCCGTCATCCTCACAG
GAAACAAAACCGGTTGGCACATTTGTCCATTCGCTGAACAAAAACGCACT
ACCTTGTCGTCAACCAACGCATCTCGTTCTCTGATTTTTCCCTGTCGTCG
AACACAAAAGATTGGGCTCACGCCAAGAGCAATTTCTCTAGAGATCTATC
GCATTTTTCCTCTTACCAAACGCAGGTGAGGTTAAATAAGAAATACTACG
ACGAGGGCTTGTTTTTGGACGCCGGAATCGACCACCTGGAGGCGTACTTC
TTGGATGGCAGCGTGCCGCCGCCTAGCGTTATTCGTCAGTTCATCGCCGC
CTGCGAAGCTACTCCGGGGGCGGTGGCGGTACACTGCAAGGTGGCATAGT
GTGCTTCTATTTGTGAACCCCCGTGCGAACGCTTACGGCACTCGATTCAC
GAGGAGTGACGTGCACCAACTATCATTCGTCTTCTAGCGGTGGCGAAATG
GATGGCTGAGGGGAGTCGAGCGCCAAGGGTGCGAGTTTACTCACGATTTT
CCTCACATAAGCCGTGGAAGTGTCGGCTCGTCAGTTGGCAGACTTCTCTT
CGTGCTCGGCAGCAACGGTGGTCACAAGCAGCCAGATGCCCTTCTACTTT
CGGCGTGCTATACCTCTGGGGAAACTCTCCTCTCAACCGCCCCCCTCCCC
ACCGCGCGACCGTTTGTGCAAGGCCGGACTTGGCCGAACTGGGACGTGCA
TCGGTTGCTACATCATGAAGCACTATAGCTTTACGGCAGCTGAGGTGATC
GGATGGATGCGGATATGCCGCCCGGTAAGAATCCGAGCGAACGGATGACA
TGCTGCACAGGTTCTGCTTTAGTACAATTGAGTACATGTCTGGGTACGGG
GAAGACTGGCCAGCCAAAGCTATGGGAAAAATAATGGTTTCCTAAGAAAA
CAGAAGTGGGTGGTGCCTTGAAAATCTCTCGAATAACACTCACGATAACA
TCGCGACTACCCGACGCGACAGGAAACAAGTATGGATGTGAAGAACGGCA
AGAATAGAAATAGAGTCATCGGCGTCGGGAGACCGCGAATCGCTTGCACC
ACGCAGTCAGTCTCCGTTTTTCGCGTGTTTCAAAGCAATACTGGTTCTCT
TTGGCCAGTTGGTAACCTTCCCAATTCTACATCGCATCTAGTGTGCACTT
GAACACTGTCGTCTCATCACAATGATACAGGGGAGCGTCATCGGGCCTCA
ACAGCACTACCTTGAGCAGATGGAGGGTCCGATGCACCGAGAGGGGGTCG
CGTTCCGACAGCGGGTACGTTCCATCTGCTGAATAATAGTGCAAGCGCAT
CTTTTACGCGGTGCCAGCATTGGACCGTGCCCTCTAAAGTCGCAAAACAA
AAAGTAAACGGAAAAGTCGGCTTCCGTACGGGAGGGCGGGGGCTGAGGTG
GGTAAGGTGAGACCACCTGCAACAAATCGTCGTTCCTTGTATTTAGTGGT
CGGCCGAAGACCCGGACGACTGCAACTGATCTCCATCTGTGGGTGCGTGT
ATGTTCTCGGCGTTTCACCTTTCCTCTACACGGTTGGAGACAGGGCTGTG
CGTGTTCTCTACTGAAGCGTCGATGCAAGCAAGTAGATTTGCACACGAGC
AGATGAACATCTGCATCGTGAATCAGGTCCACTTGTTGGCTTAACTTGCG
TTGTTTGTGTTGCGCCTTTTGGTGTCGAAAGCGCAATACTTTTGGCTAGA
TTGGTCGGACGACAACGGTTGCAAAGCAAGGAGAGCAACAACAACCATAA
CCTCACCGCTTGTATGGCTATCTTCAAAGCTCGTGTGGTAAACGTCGCGC
ATGACCACCATCACATCCATGCCCACCGCAAGCACCCACCGGCCCTTACG
CTCGGAAGATGGAGTGCACCTGTTGTTCTGCTGTTCGGACCTGCAAAACA
AAGGACACTTTCATGCCTGCCTTTACTTCGTGAGGCAACAAATGCGCACC
ACACAGAAATCCTCCTGAGAACGTTGCATGGCAACACGGCAACGTCTAAC
AGAGGTGAAGCGTGCCGACGTCAGCAAAAGAAGGAGACTAAGCCTCCTGA
ACCAAACCACTCCACTCCAAGCTCCCACGCACATTAGTAGCAAACCACGG
TCCTCCGAATCACCCGGTTCCTCGTAATGTGTAGAAGAACACCCGGACAC
GCTCTTACTAATCCGTGGCGAAAACAAACCTCAGGCTGGAAGTTGCACAA
GTACGAGGCGTGCATCCGGAGTTCTGCCGGCGCGACGGGAGGATCAAGGA
GAGCGTCGGGCAGAGCAAGCGCGTAGCGAAGCGGCAGCAGAGGCTCAGGC
CGAAGGGACGCGAGCCGCCAAGGGAAGCAACAACGGAAAGCAAGCAGCGC
GAGAGTGGGGGATGACCCGGCAGCTAGGCGGTAGATCCAGATCTTCAGCT
GGAGGGGGTGGTTTTAGCCGTTCGTCCCCCTCGCGCGATCTTCGCCTGTT
CGCCTGTTCGCTCCGCCCATGCGAGGGGGGTGCCGTCCGGGGTAAGGGTT
CGCCCATGAAGGAGGAGGGGACCTCGACCCGTCGCTCAAACCTCGACCCT
GACGAACAAGTGGCACGATATGGGAACACCACCACGAACAGCAGGAGCAA
CACCAGGAGAAAATCCACAGGCCAGCGGCAGCAAGCCCCGCCATTGTCTC
CTCTCGAGACCGGGGGAAGAGTGGAGCGGCGGGGGGGATCGGGAAGAGGG
GCGTACGAAAGGATGGCGACAACACAGCGGGCCCGCCAGACCGGCTTACG
TCGAGCAAGCGCGCCATGCGGGCATGCAGCAGAGAAGTCTGCGGCAGCGA
TGTCCGCCGCAGCGATGGTTGAAGAAGAGACATCAGCGGCGTCGGCATCG
GCAGTGGCGGTGGCACCTGATAACAGAACCTCGTTAGATGCGTGGGATCA
TATGGCAGCAGCAGGTCAAAGAACAGGCGGAAAAGGAGGAGCAGGAGGAT
GGGCTCTGGGAGAAATAACACAGGGGGACTTGCTGCGGCAGCAGAGATCA
AGACGGTAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6269:654..7912-

>mRNA_Ecto-sp13_S_contig6269.16999.1 ID=mRNA_Ecto-sp13_S_contig6269.16999.1|Name=mRNA_Ecto-sp13_S_contig6269.16999.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1767bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6269:654..7912- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCTTCGGGTGGAGGCGCTGTGGAACTTATCCCGGCTGACGAGTTTTC
TTACTGGAATTTTTTCCTAGACTGGGGACCGCTCTCCTTGGGTAACCTTT
TCCGATTCTGCCGGACGCTGAACTTCAAGCTCGCGAACGAGAGGAAGCTT
GGCAAGGCAGTGTACGTGTACTCCGGAACCCACGCCCACAAGCGGACTAA
CGCAGCTTTCCTCCTAACCGCGTGGCTCCTGTTGTATGGTGGCAGAACTC
CAGAACAGGCGTTCGCACCATTTCAGGACGTGTTTCCACCGTTCCCGCCG
TTCCACGACGCGTCGCCATGCGTCTGCACGTTCGACCTCTTCATCCCGCA
CTGTCTCAAAGGTCTCCAGAAAGCTCGTCACTTCAGTTTCTTCAACTTCG
ACACCTTTGACGTCGAAGAATACGAGCACTACGAGCAGGTCGAGAACGGC
GACTTGAACTGGCTCGTCGACGGAAAGTTCTTGGCATTCGCAGGGCCGCA
CAGTCGCTCTGAAATGACGAAAGAAGGCTACCGGACGCTAACCCCACGGA
ACTACATTCCCTACTTCAAGCAACACAATGTCACGCTCGTGGTGAGGTTA
AATAAGAAATACTACGACGAGGGCTTGTTTTTGGACGCCGGAATCGACCA
CCTGGAGGCGTACTTCTTGGATGGCAGCGTGCCGCCGCCTAGCGTTATTC
GTCAGTTCATCGCCGCCTGCGAAGCTACTCCGGGGGCGGTGGCGGTACAC
TGCAAGGCCGGACTTGGCCGAACTGGGACGTGCATCGGTTGCTACATCAT
GAAGCACTATAGCTTTACGGCAGCTGAGGTGATCGGATGGATGCGGATAT
GCCGCCCGGGGAGCGTCATCGGGCCTCAACAGCACTACCTTGAGCAGATG
GAGGGTCCGATGCACCGAGAGGGGGTCGCGTTCCGACAGCGGGCTGGAAG
TTGCACAAGTACGAGGCGTGCATCCGGAGTTCTGCCGGCGCGACGGGAGG
ATCAAGGAGAGCGTCGGGCAGAGCAAGCGCGTAGCGAAGCGGCAGCAGAG
GCTCAGGCCGAAGGGACGCGAGCCGCCAAGGGAAGCAACAACGGAAAGCA
AGCAGCGCGAGAGTGGGGGATGACCCGGCAGCTAGGCGGTAGATCCAGAT
CTTCAGCTGGAGGGGGTGGTTTTAGCCGTTCGTCCCCCTCGCGCGATCTT
CGCCTGTTCGCCTGTTCGCTCCGCCCATGCGAGGGGGGTGCCGTCCGGGG
TAAGGGTTCGCCCATGAAGGAGGAGGGGACCTCGACCCGTCGCTCAAACC
TCGACCCTGACGAACAAGTGGCACGATATGGGAACACCACCACGAACAGC
AGGAGCAACACCAGGAGAAAATCCACAGGCCAGCGGCAGCAAGCCCCGCC
ATTGTCTCCTCTCGAGACCGGGGGAAGAGTGGAGCGGCGGGGGGGATCGG
GAAGAGGGGCGTACGAAAGGATGGCGACAACACAGCGGGCCCGCCAGACC
GGCTTACGTCGAGCAAGCGCGCCATGCGGGCATGCAGCAGAGAAGTCTGC
GGCAGCGATGTCCGCCGCAGCGATGGTTGAAGAAGAGACATCAGCGGCGT
CGGCATCGGCAGTGGCGGTGGCACCTGATAACAGAACCTCGTTAGATGCG
TGGGATCATATGGCAGCAGCAGGTCAAAGAACAGGCGGAAAAGGAGGAGC
AGGAGGATGGGCTCTGGGAGAAATAACACAGGGGGACTTGCTGCGGCAGC
AGAGATCAAGACGGTAA
back to top