mRNA_Ecto-sp13_S_contig6265.16994.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6265.16994.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI) HSP 1 Score: 260 bits (664), Expect = 1.990e-86 Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 1
Query: 1 PVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPTEAIQ 381
PVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELP+EAIQ
Sbjct: 54 PVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQ 180
BLAST of mRNA_Ecto-sp13_S_contig6265.16994.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE) HSP 1 Score: 223 bits (568), Expect = 1.000e-71 Identity = 105/126 (83.33%), Postives = 113/126 (89.68%), Query Frame = 1
Query: 4 VDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPTEAIQ 381
VDGFQ+R A + Q+PALDGQGI+M LVNLD C INLPHIHPRATEM YVI GE LRVAFVEENGGEGAVVNDL+QGDV FFPQGLIHY+QNL CEP TFLAALNN+DPGA+TITTRFFELP EAIQ
Sbjct: 54 VDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQ 179
BLAST of mRNA_Ecto-sp13_S_contig6265.16994.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG) HSP 1 Score: 140 bits (353), Expect = 5.390e-39 Identity = 68/128 (53.12%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 10 GFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPTEAIQVRAG 393
G + LG +PAL QG+AM L+NL+ C NLPH+HPRA+E YVI G +++V F+EENG + +VNDL QG TF PQG IHY+ NLGCE +AA NN+DPG +TI +FF+LP AI G
Sbjct: 66 GGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQG-NVQVGFIEENGAK-VIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLG 191
BLAST of mRNA_Ecto-sp13_S_contig6265.16994.1 vs. uniprot
Match: A0A165BNY0_EXIGL (RmlC-like cupin n=2 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165BNY0_EXIGL) HSP 1 Score: 126 bits (317), Expect = 7.310e-34 Identity = 66/128 (51.56%), Postives = 77/128 (60.16%), Query Frame = 1
Query: 10 GFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPTEAIQVRAG 393
G A PAL G G+AM L LDAC+IN PH HPRATE V+NG LR F+ ENG ++ND+ T FPQG IH+E NLGCEPV F+AA NN+DPG + I RFF LP I G
Sbjct: 45 GGHTTHAARDTFPALVGTGMAMTLGFLDACSINTPHTHPRATEFNLVMNGT-LRAGFLAENGAR-FIMNDVPALSATIFPQGAIHFEANLGCEPVIFIAAFNNEDPGVLQIAQRFFGLPGSVIGASLG 170
BLAST of mRNA_Ecto-sp13_S_contig6265.16994.1 vs. uniprot
Match: A0A0G4EJ88_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ88_VITBC) HSP 1 Score: 126 bits (317), Expect = 6.860e-33 Identity = 61/129 (47.29%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 10 GFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPTEAIQVRAGI 396
G + A++ Q PAL G G++ LV+L C+IN PH+HPRATE+ Y+I G + V F EENGG V ND+ +GD FFP LIH++ N CEP F+A LN+DD G TI FF LP + + G+
Sbjct: 162 GGAVTGASVSQWPALSGHGLSHTLVDLAPCSINTPHVHPRATEIIYIIKGR-VSVGFAEENGGR-IVTNDVKEGDTAFFPHTLIHWQFNPTCEPAQFIATLNSDDGGVQTIAQAFFGLPDDVLATALGV 288
BLAST of mRNA_Ecto-sp13_S_contig6265.16994.1 vs. uniprot
Match: A0A0L0G050_9EUKA (Cupin type-1 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G050_9EUKA) HSP 1 Score: 125 bits (313), Expect = 4.450e-32 Identity = 62/129 (48.06%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 7 DGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPTEAIQVRAG 393
+G I+ L PAL +A ++ C INLPHIHPRATE+ Y+++G + V FV ENGG GA++N+LS TFFPQGLIH++QN+ CEP F+++LN DPG +T+ + F LPTEA+ G
Sbjct: 128 NGGTIQPIELAAHPALVLANMAQTKFTIEPCGINLPHIHPRATELVYMVSGA-VTVGFVGENGG-GAIMNNLSADMSTFFPQGLIHFQQNMECEPAVFVSSLNGVDPGTITLPEQLFALPTEALSAAFG 254
BLAST of mRNA_Ecto-sp13_S_contig6265.16994.1 vs. uniprot
Match: A0A814L9M3_ADIRI (Hypothetical protein n=3 Tax=Adineta ricciae TaxID=249248 RepID=A0A814L9M3_ADIRI) HSP 1 Score: 122 bits (305), Expect = 9.090e-32 Identity = 60/129 (46.51%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 10 GFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFF-ELPTEAIQVRAG 393
G + +AT P L G G+AM L L C INLPH HPRATE+ Y ++G H +V F +ENG ++N++ + V FP+G IH+EQNL CEP TF+AA N++DPG +TI +F LP I G
Sbjct: 93 GGRTVSATASNFPGLIGHGVAMTLGFLGPCGINLPHTHPRATEINYSVDG-HFQVGFYQENGA-AFIMNEIQKNQVAVFPKGAIHFEQNLNCEPATFVAAFNSEDPGVLTIANAYFGALPATVIGANLG 219
BLAST of mRNA_Ecto-sp13_S_contig6265.16994.1 vs. uniprot
Match: L8H6S8_ACACA (Spherulin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H6S8_ACACA) HSP 1 Score: 120 bits (302), Expect = 1.820e-31 Identity = 61/128 (47.66%), Postives = 75/128 (58.59%), Query Frame = 1
Query: 10 GFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPTEAIQVRAG 393
G + AAT PAL G G+AM + L C INLPH HPRATE +V +G F ENG E + N ++QG FPQG IH+EQN+ CEP F+A NN+DPG TI + FF LPT + G
Sbjct: 77 GGKTVAATARNFPALIGNGVAMTVGYLGPCGINLPHTHPRATEFNFVASGA-FEAGFFMENGNEFVMTN-VTQGMAVVFPQGAIHFEQNMNCEPAVFVAGFNNEDPGVSTIASNFFGLPTAIVGASLG 202
BLAST of mRNA_Ecto-sp13_S_contig6265.16994.1 vs. uniprot
Match: A0A433DF28_9FUNG (RmlC-like cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG) HSP 1 Score: 120 bits (301), Expect = 2.390e-31 Identity = 61/125 (48.80%), Postives = 79/125 (63.20%), Query Frame = 1
Query: 7 DGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFE-LPTEAI 378
DG + AAT PAL G IAM + + C+INLPHIHPRATE+ ++ G+ F EENG +VN L +G+VT FP G IH+EQNL CEP F+AA N++DPG TI + F LP + +
Sbjct: 75 DGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINFIAQGK-FEAGFFEENGAR-FIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIV 197
BLAST of mRNA_Ecto-sp13_S_contig6265.16994.1 vs. uniprot
Match: A0A8H7DGE6_9AGAR (Cupin type-1 domain-containing protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H7DGE6_9AGAR) HSP 1 Score: 120 bits (302), Expect = 2.550e-31 Identity = 59/122 (48.36%), Postives = 76/122 (62.30%), Query Frame = 1
Query: 28 ATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPTEAIQVRAG 393
AT G PA+ G GIAM + L C IN PH HPRATE+ Y +NG LR + ENG V+N+L G +T FPQG +H+E N GCEP F+A N++DPG +++ RFF LP + I G
Sbjct: 74 ATSGTFPAVVGNGIAMTIGFLGPCGINTPHTHPRATEINYSVNGT-LRAGLLTENGAR-FVMNELPPGSMTVFPQGAVHFEMNDGCEPAMFVAGFNSEDPGVLSVAQRFFGLPIDIIGATMG 193 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6265.16994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6265.16994.1 >prot_Ecto-sp13_S_contig6265.16994.1 ID=prot_Ecto-sp13_S_contig6265.16994.1|Name=mRNA_Ecto-sp13_S_contig6265.16994.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=132bp PVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVback to top mRNA from alignment at Ecto-sp13_S_contig6265:4964..6146- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6265.16994.1 ID=mRNA_Ecto-sp13_S_contig6265.16994.1|Name=mRNA_Ecto-sp13_S_contig6265.16994.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1183bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6265:4964..6146- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6265:4964..6146- >mRNA_Ecto-sp13_S_contig6265.16994.1 ID=mRNA_Ecto-sp13_S_contig6265.16994.1|Name=mRNA_Ecto-sp13_S_contig6265.16994.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=396bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6265:4964..6146- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |