prot_Ecto-sp13_S_contig62644.16993.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig62644.16993.1
Unique Nameprot_Ecto-sp13_S_contig62644.16993.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length75
Homology
BLAST of mRNA_Ecto-sp13_S_contig62644.16993.1 vs. uniprot
Match: D7G0V4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V4_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 6.500e-37
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0
Query:    6 QDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQV 75
            +DIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHH PLLGSQSHLHALVRDVLGQSENLRSQV
Sbjct: 1531 EDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHTPLLGSQSHLHALVRDVLGQSENLRSQV 1600          
BLAST of mRNA_Ecto-sp13_S_contig62644.16993.1 vs. uniprot
Match: A0A6H5L523_9PHAE (CLASP_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L523_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 8.860e-37
Identity = 67/70 (95.71%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    6 QDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQV 75
            +DIRPSPNPSQE+QRAMASLPRDGWPEIFHTLNSVRRLATHH+PLLGSQSHLHALVRDVLGQSENLRSQV
Sbjct: 1537 EDIRPSPNPSQEMQRAMASLPRDGWPEIFHTLNSVRRLATHHSPLLGSQSHLHALVRDVLGQSENLRSQV 1606          
BLAST of mRNA_Ecto-sp13_S_contig62644.16993.1 vs. uniprot
Match: A0A7S3YBP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YBP5_HETAK)

HSP 1 Score: 95.9 bits (237), Expect = 1.800e-22
Identity = 47/69 (68.12%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    7 DIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQV 75
            DIRPSPNPS ELQR + +LP   WPE+FHTLN+VRRL  HH  LL  + HLH +VRDVL QSENLRS V
Sbjct:   15 DIRPSPNPSHELQRTLRALPNGEWPEVFHTLNAVRRLGLHHGALL--EPHLHGVVRDVLKQSENLRSAV 81          
BLAST of mRNA_Ecto-sp13_S_contig62644.16993.1 vs. uniprot
Match: A0A835ZHW3_9STRA (TOG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW3_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 8.220e-19
Identity = 44/68 (64.71%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    7 DIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQ 74
            D+RPSPN   EL RA+ASL RD WPEIFHTLN+ RRLA HHAPL+  ++H   L RDVL   +NLRSQ
Sbjct: 1251 DLRPSPNAKAELARALASLARDDWPEIFHTLNAARRLARHHAPLV--EAHARELTRDVLRHVDNLRSQ 1316          
BLAST of mRNA_Ecto-sp13_S_contig62644.16993.1 vs. uniprot
Match: A0A4D9CTV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTV7_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.430e-7
Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    8 IRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQS--HLHALVRDVLGQSENLRSQV 75
            +RP P+P+Q L   + SLP   WPE FH+L ++RRLA HH  +L + S   L  L+ ++    +NLRS V
Sbjct:  481 LRPLPDPNQSLTHLVTSLPTADWPENFHSLTTIRRLALHHPDILFALSPPSLRLLLVELFRLIDNLRSAV 550          
BLAST of mRNA_Ecto-sp13_S_contig62644.16993.1 vs. uniprot
Match: H3HAM4_PHYRM (TOG domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HAM4_PHYRM)

HSP 1 Score: 56.2 bits (134), Expect = 1.970e-7
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 0
Query:    1 RIIHRQDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQV 75
            R +   +I P  NP Q+L + +  L  + W   F  +N+VRRLA HHA ++   S +H +V ++L Q  NLRS V
Sbjct:  486 RYLELHEITPLMNPKQDLSKILTQLRSEDWEANFDAMNTVRRLAIHHAGMI-DLSKVHGIVAEILKQVPNLRSSV 559          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62644.16993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G0V4_ECTSI6.500e-3797.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L523_9PHAE8.860e-3795.71CLASP_N domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3YBP5_HETAK1.800e-2268.12Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835ZHW3_9STRA8.220e-1964.71TOG domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9CTV7_9STRA1.430e-742.86Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
H3HAM4_PHYRM1.970e-738.67TOG domain-containing protein n=1 Tax=Phytophthora... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig62644contigEcto-sp13_S_contig62644:11..235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig62644.16993.1mRNA_Ecto-sp13_S_contig62644.16993.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig62644 11..235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig62644.16993.1 ID=prot_Ecto-sp13_S_contig62644.16993.1|Name=mRNA_Ecto-sp13_S_contig62644.16993.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=75bp
RIIHRQDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPL
LGSQSHLHALVRDVLGQSENLRSQV
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