prot_Ecto-sp13_S_contig62636.16992.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig62636.16992.1
Unique Nameprot_Ecto-sp13_S_contig62636.16992.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length45
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig62636.16992.1 vs. uniprot
Match: D8LNW5_ECTSI (Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW5_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.630e-19
Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = 0 
Query:    1 NKSLDKLKELGIEGALFEHHKAMTVPEQEMALRGVTGDKTKNLFL 45
            NKSLDKLKELGIEGALFEHH+AMTVPEQEMALRGV+GDKTKNLFL
Sbjct:  191 NKSLDKLKELGIEGALFEHHRAMTVPEQEMALRGVSGDKTKNLFL 235
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62636.16992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNW5_ECTSI1.630e-1995.56Proline--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig62636contigEcto-sp13_S_contig62636:652..786 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig62636.16992.1mRNA_Ecto-sp13_S_contig62636.16992.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig62636 652..786 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig62636.16992.1 ID=prot_Ecto-sp13_S_contig62636.16992.1|Name=mRNA_Ecto-sp13_S_contig62636.16992.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=45bp
NKSLDKLKELGIEGALFEHHKAMTVPEQEMALRGVTGDKTKNLFL
back to top