mRNA_Ecto-sp13_S_contig6261.16989.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6261.16989.1
Unique NamemRNA_Ecto-sp13_S_contig6261.16989.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: A0A6H5KFX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFX9_9PHAE)

HSP 1 Score: 793 bits (2047), Expect = 2.110e-280
Identity = 379/412 (91.99%), Postives = 396/412 (96.12%), Query Frame = 1
Query:  253 MATAMMTIAMATVKIGLVEAKEDGGGAVPSVVIGAVPPSTETQQQSHNGIGSTTTHDRLRGSMTVPRPSLMKSDEPYPWTGAGGKFGLDSDWREAAMMPGARGGEATMRGDNCMGDAKQRQVREILERRANTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQCDVISVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKWLMERDINSFKSDTITTWACATREVLSVVLEGGDLNKVLPVMDE 1488
            MA AMMT+AMATV +G VEAK+DGG AVP VVIGAVPPSTE QQQSH+ +GSTTTHDRLRGSMTVPRP L++SDEPYPWTGAGGKFGL SDWREAAMMPGARGGEATMRGD+CMGDAKQRQVREILERRA TPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSND+TVEILQPFVDAGIVTY+LERTGHW+NQMTPLNLCLEEHMVRRLGDN+APRWLLFHDTDEY+VPVDTSVTIAQALDKHS+TCCVRVPRVTYGAGGHDEMPQGLLLE+FL+HAHLHDFK NRLPKV VNLDTTQPLLGQA S LKSMHNGQGCQCDVI VDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKWL+ERDINSFKSDTITTWACATREVLSVVLEG DLNKVLPVMDE
Sbjct:    1 MAMAMMTVAMATVIVGFVEAKDDGGVAVPGVVIGAVPPSTEGQQQSHSSVGSTTTHDRLRGSMTVPRPRLLESDEPYPWTGAGGKFGLTSDWREAAMMPGARGGEATMRGDSCMGDAKQRQVREILERRAKTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDDTVEILQPFVDAGIVTYILERTGHWENQMTPLNLCLEEHMVRRLGDNEAPRWLLFHDTDEYVVPVDTSVTIAQALDKHSATCCVRVPRVTYGAGGHDEMPQGLLLEVFLQHAHLHDFKSNRLPKVAVNLDTTQPLLGQARSRLKSMHNGQGCQCDVIPVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKWLLERDINSFKSDTITTWACATREVLSVVLEGSDLNKVLPVMDE 412          
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: A0A6H5KB75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB75_9PHAE)

HSP 1 Score: 374 bits (960), Expect = 8.100e-116
Identity = 190/354 (53.67%), Postives = 236/354 (66.67%), Query Frame = 1
Query:  442 TVPRPSLMKSDEPYPWTGAGGKFGLDSDWREAAMMPG------ARGGEATMRGDNCMGDAKQRQVREILERRAN-TPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRL-GDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQC---DVISVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVE-KWLMERDINSFKSDTITTWACATREVLSVVLEGGDLNK 1467
            T+   +   + +   W GAGG+FGL +DWREA  +PG      A  GE    G  C+ + KQ +VREILE+R   +  T++VA C+RTKDF RFLPEWIA+HYA+GVDE+ IYDDDS DNT E+L+PFV+AGIV Y+ E       QM PLN CLE+H+ RR  GD DA  W+LFHDTDEY+ P DTS+ I  AL+KH  TCC  V RV YG+ GHDEMP+GLLLE FL H+H      N LPKVMVNLD ++P LG     L+SMHN +GC C       V  +RINHYLGS GDY+ +T RYW+E    +    K ++ RDIN ++SD I  WACATREVL  ++EG DL K
Sbjct:  134 TLQENATGAASDTGQWRGAGGEFGLSADWREALSVPGGGDDEGAGAGEGLRGGGACLAEKKQAEVREILEKRGTASTTTNRVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTKEVLRPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGQQFGNGLPKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGSKSSGVSNLRINHYLGSIGDYMDRTARYWEEKKQGEMAAAKTVLHRDINDYRSDDIEHWACATREVLFRIVEGLDLEK 487          
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: D7FYE9_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE9_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 9.990e-95
Identity = 155/272 (56.99%), Postives = 189/272 (69.49%), Query Frame = 1
Query:  661 KVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRL-GDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQC---DVISVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVE-KWLMERDINSFKSDTITTWACATREVLSVVLEGGDL 1461
            KVA C+RTKDF RFLPEWIA+HYA+GVDE+ IYDDDS DNT E+L PFV+AGIV Y+ E       QM PLN CLE+ + RR  GD DA  W+LFHDTDEY+ P DTS+ I  AL+KH  TCC  V RV YG+ GHDEMP+GLLLE FL H+H      N L KVMVNLD ++P +G     L+SMHN +GC C       V ++RINHYLGS GDY+ +T RYW+     +    K ++ RDIN+++SD I  WACATREVL  ++EG DL
Sbjct:    2 KVAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLAKVMVNLDPSEPEVGVVEPPLRSMHNAEGCDCAGSKFGGVSDLRINHYLGSIGDYMDRTTRYWEAKKKGEMAAAKTVLRRDINNYRSDDIEHWACATREVLFRIVEGLDL 273          
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: D7FLX6_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX6_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 1.170e-94
Identity = 172/389 (44.22%), Postives = 224/389 (57.58%), Query Frame = 1
Query:  316 EDGGGAVPSVVIGAVPPSTETQQQSHNGIGSTTTHDRLRGSMTVPRPSLMKSDEPYPWTGAGGKFGLDSDWREAAMMPGARGGEATMRGDNCMGDAKQRQVREILERRANTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGD-NDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQCDVISVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKW-LMERDINSFKSDTITTWACATREVLSVVLEGGDLNKVLP 1476
            E  G  VP+V +G   P+   Q +                     + S   ++ P  W G GG FG+D DWR A    G  G E  +RG+ CM    +++V                A C+RTKD+GRFLPEW+A+HYAIGVDE++IYDD+S D T E+L+PFV AGIV Y+ +       QM PLN CL  ++ R+  D  +AP WLLFHD DEY+ P DTS+T+  AL+KH STCC  V R+ YG+GGHDEMP+GL+++ F+  AH +D   +  PKV+VNL  T+         LKSMH  +GC C  +   E+ INHYLGSRGDYL +  RYW    + D      L +RD+N   SDTIT W+C+TREVL  V  G DL   LP
Sbjct:   95 EASGQGVPTVELGEELPTQSPQSKDE-------------------KKSDDSTEPPESWKGRGGPFGIDGDWRNALQEDGGDGAENGLRGEACMTHENRKEV----------------AVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRNAQMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNKHESTCCALVRRIQYGSGGHDEMPRGLVMDSFM--AHQNDSSHHANPKVVVNLTPTES--DPVAPPLKSMHKAEGCACLDLK-QEVLINHYLGSRGDYLERVHRYWSTYMAGDNDPGHRLSQRDVNDRVSDTITHWSCSTREVLYRVDNGLDLQTGLP 443          
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: A0A6H5JE36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE36_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.460e-31
Identity = 78/181 (43.09%), Postives = 108/181 (59.67%), Query Frame = 1
Query:  652 GTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVE----ILQPFVDAGIVTYVLERTGHWQNQMTP-------LNLCLEEHM-VRRLGDNDAPRWLLFHDTDEYIVPVDTS-VTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVM 1155
            G  +V +C RTKD GR+LPEW+AYH+A+GVDEM I+DDDS D+T E    +L+PFV AGIV +            TP       L  C+E +  +   GD  APRW++  DTDEY+   +   + + +AL+  S+TCC++V  V +G  G  + P+GLLLE FL HA     + N  PKV+
Sbjct:  247 GFEQVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDTREARIFVLEPFVRAGIVKFQRRHIDPRNATSTPPSAAMPPLTECVESYRGMHDWGDRLAPRWVVLLDTDEYLWAREAGKIGLPEALEARSTTCCLQVSTVQHGTSGFSKSPRGLLLENFLTHADPTSPELNGPPKVL 427          
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: A0A520BS46_9SPHI (Glycosyltransferase family 92 protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A520BS46_9SPHI)

HSP 1 Score: 105 bits (261), Expect = 5.060e-21
Identity = 83/272 (30.51%), Postives = 127/272 (46.69%), Query Frame = 1
Query:  625 ILERRANTPGTSK--VAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHW---QNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQCDVISV-----------DEIRINHY-LGSRGDYLGKTKRYWQEVYSRDKVEKWLMERDINSFK 1389
            +L+ R N     K  +A C   K+ G +  EWI +H  +GV++  IYD++S DNT EIL P+V+ G+V Y+      W   + Q+   + CLE+H +         RWL   D DE+I P+   +TI   L  H     V +  + YG+GG  E  QG ++E F +H+ L +   NR  K +VN       +G    H  +  +G+        +           D IRINHY + S  ++L K  R    V     ++ +  E D+N  K
Sbjct:   37 MLKMRRNKSAKPKHYLAICAIAKNEGPYFEEWITWHQKLGVEKFYIYDNESTDNTREILAPYVETGLVDYIF-----WPGLKQQLITYDDCLEKHRL-------DTRWLAVIDMDEFIKPIQ-DLTITDFLKNHEDVPAVEINWLVYGSGGAKEKEQGSIMERFKKHS-LPNHYLNRHIKSIVNPRRVFTFIG---CHEVARMSGKTVDPHGNPIQKHFRDREPQHDVIRINHYAVKSYDEFLQKRARGRARVLDERGLD-YFEEYDLNDIK 290          
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: A0A2E1N3H0_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E1N3H0_9FLAO)

HSP 1 Score: 102 bits (255), Expect = 1.750e-20
Identity = 82/256 (32.03%), Postives = 130/256 (50.78%), Query Frame = 1
Query:  664 VAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVN-------LDTTQPLLGQATSHLKSMHNGQGCQC-DVISV-DEIRINHY-LGSRGDYLGKTKRYWQEVYSRDKVEKWLMERDINSFKSDTI 1401
            +  C   K+ GR+L EWI YH  +GV++  IYD++S DNT+EILQP++D+ +V Y        + Q+     C+ +H           R+L F D DE+IVP+    TI   L    S   V++  + YG+GG     +GL++E F +H+   D K N   KV++N           +P++     ++ S  N    Q  D I V D+IRINHY + S  ++L K  R  +  + R +   +    ++N  K+D+I
Sbjct:   14 ITLCAIAKNEGRYLKEWIEYHKMMGVEKFFIYDNESTDNTLEILQPYIDSNLVDYCYFPGK--KMQLKAYADCVRKHKRNT-------RYLGFLDIDEFIVPIKHK-TIPDYLRSLGSFSGVQINWLVYGSGGAKRREKGLVMERFKDHS-FSDHKLNHHIKVILNPRLILRFFSAHRPVI--FGRYIDSNGNVTKKQFWDRIPVSDQIRINHYAIKSYEEFLEKRSR-GRARFDRKRGLDYFDNYNLNDIKNDSI 255          
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: UPI0013D35659 (glycosyltransferase family 92 protein n=1 Tax=Bacteroides sp. 214 TaxID=2302935 RepID=UPI0013D35659)

HSP 1 Score: 102 bits (255), Expect = 2.870e-20
Identity = 73/242 (30.17%), Postives = 120/242 (49.59%), Query Frame = 1
Query:  628 LERRANTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQCDVISV-----------DEIRINHY-LGSRGDYLGKTKR 1317
            L+R  +TP    +A C   K+ G ++ EWI +H  +GV++  IYD++S DNT E+L P++++G+V Y L      + Q+   + CLE + +         RW+   D DE+I+P+    TI + L +      V +  + YG+GG  E  +G ++E F  H+ L +   NR  K +VN       +G    H  +  +G+      + +           D IRINHY + S  ++LGK  R
Sbjct:   40 LKREKDTPIRYYLAVCAIAKNEGAYMVEWIEHHRKLGVEKFYIYDNESTDNTREVLAPYIESGLVAYHL--FPGTKQQLPAYDHCLEHYRMEA-------RWIAVIDLDEFILPLKDK-TIPEFLKRFEEFPVVEINWLLYGSGGAKEKVEGTVMERFKRHS-LPNHISNRHVKSIVNPRRVFNFIG---CHEAARISGKAADSHGMPITKNFRDREPQQDVIRINHYAVKSYEEFLGKRAR 267          
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: UPI001408A856 (glycosyltransferase family 92 protein n=1 Tax=Perlabentimonas gracilis TaxID=2715279 RepID=UPI001408A856)

HSP 1 Score: 102 bits (255), Expect = 3.550e-20
Identity = 75/230 (32.61%), Postives = 119/230 (51.74%), Query Frame = 1
Query:  664 VAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQCDVISV-----------DEIRINHY-LGSRGDYLGKTKR 1317
            +  C   K+ G +  EWI +H A GV++  IY+++S DNT+E+LQP++D+GIV Y    TG  + Q T  N CL+++        DA RW+ F D DE+IVP+ T  +I + L        V +  + YG+GG      G +++ F  H++ +  + NR  K +VN    +  L   +SH  ++ +G     +   V           D+IRINHY + S  ++L K  R
Sbjct:   55 LTVCAIAKNEGAYFKEWIEWHLAHGVEKFYIYNNESTDNTIEVLQPYIDSGIVEYHFI-TGK-RKQTTAYNHCLKQYRY------DA-RWIAFIDLDEFIVPIKTK-SIPEFLKPFEGFAAVEINWLCYGSGGAKTRMLGGVMDRFRTHSYPNS-QLNRHIKSIVN---PRLALNFLSSHHPTLLSGHAADTNGHKVRKYFFQREPLHDKIRINHYAVKSFEEFLEKKAR 270          
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: R5PZS6_9PROT (Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:977 TaxID=1262685 RepID=R5PZS6_9PROT)

HSP 1 Score: 102 bits (254), Expect = 3.580e-20
Identity = 68/241 (28.22%), Postives = 120/241 (49.79%), Query Frame = 1
Query:  616 VREILERRANTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVN------LDTTQPLLGQATSHLKSMHNGQGCQCDVISVDEIRINHYLG-SRGDYLGKTKR 1317
            +R  L++  N+     ++ C   K+   +LPEWI ++  +GV++  IYD++S+DNT E+L+P++D G V Y  +  G  Q Q+   N  ++++        +  +WL F D DE+++P+ T  TI + L  +   C V +  + YG  GH     GL+LE F  H+    F  N+  K + N      +D    +     +  ++     G   +   + +IR+NHY G S  +++ K  R
Sbjct:    1 MRRRLKKEKNSEFPQYLSLCAIVKNEAPYLPEWIEFYKLVGVEKFYIYDNESSDNTKEVLKPYIDTGDVVYTYQ-PGQAQ-QLVAYNDAVKKY-------KNETKWLGFFDLDEFVMPLSTK-TIPEFLKDYEEECGVVIYWLVYGDNGHKTKTDGLVLERFTAHSE-EGFGVNKYLKTIANPREIKRMDVHYAVYRGGFAKDENGSFRPGGMGEYPQIKKIRMNHYFGKSFEEFMQKRNR 230          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFX9_9PHAE2.110e-28091.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KB75_9PHAE8.100e-11653.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYE9_ECTSI9.990e-9556.99Glycosyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
D7FLX6_ECTSI1.170e-9444.22Glycosyltransferase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5JE36_9PHAE2.460e-3143.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A520BS46_9SPHI5.060e-2130.51Glycosyltransferase family 92 protein n=2 Tax=Bact... [more]
A0A2E1N3H0_9FLAO1.750e-2032.03Uncharacterized protein n=1 Tax=Flavobacteriaceae ... [more]
UPI0013D356592.870e-2030.17glycosyltransferase family 92 protein n=1 Tax=Bact... [more]
UPI001408A8563.550e-2032.61glycosyltransferase family 92 protein n=1 Tax=Perl... [more]
R5PZS6_9PROT3.580e-2028.22Uncharacterized protein n=1 Tax=Acetobacter sp. CA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6261contigEcto-sp13_S_contig6261:1453..8349 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start1
Seed ortholog score97.1
Seed ortholog evalue2.3e-17
Seed eggNOG ortholog1045854.WKK_02445
Model size2892
Hectar predicted targeting categorysignal peptide
Exons8
EggNOG free text desc.Glycosyltransferase family 92
EggNOG OGs1VCNF@1239,4HZPE@91061,COG0463@1,COG0463@2
Cds size1329
COG Functional cat.M
Best tax levelBacilli
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6261.16989.1prot_Ecto-sp13_S_contig6261.16989.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6261 2868..6948 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463869.8609037-UTR-Ecto-sp13_S_contig6261:1452..15961681463869.8609037-UTR-Ecto-sp13_S_contig6261:1452..1596Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6261 1453..1596 +
1681463869.8733213-UTR-Ecto-sp13_S_contig6261:2849..28671681463869.8733213-UTR-Ecto-sp13_S_contig6261:2849..2867Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6261 2850..2867 +
1681463869.967995-UTR-Ecto-sp13_S_contig6261:6948..83491681463869.967995-UTR-Ecto-sp13_S_contig6261:6948..8349Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6261 6949..8349 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463869.8823507-CDS-Ecto-sp13_S_contig6261:2867..31301681463869.8823507-CDS-Ecto-sp13_S_contig6261:2867..3130Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6261 2868..3130 +
1681463869.8941374-CDS-Ecto-sp13_S_contig6261:3474..37121681463869.8941374-CDS-Ecto-sp13_S_contig6261:3474..3712Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6261 3475..3712 +
1681463869.9060898-CDS-Ecto-sp13_S_contig6261:4308..44931681463869.9060898-CDS-Ecto-sp13_S_contig6261:4308..4493Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6261 4309..4493 +
1681463869.9181666-CDS-Ecto-sp13_S_contig6261:5123..53071681463869.9181666-CDS-Ecto-sp13_S_contig6261:5123..5307Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6261 5124..5307 +
1681463869.9317517-CDS-Ecto-sp13_S_contig6261:5727..58441681463869.9317517-CDS-Ecto-sp13_S_contig6261:5727..5844Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6261 5728..5844 +
1681463869.9489164-CDS-Ecto-sp13_S_contig6261:6249..64261681463869.9489164-CDS-Ecto-sp13_S_contig6261:6249..6426Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6261 6250..6426 +
1681463869.958726-CDS-Ecto-sp13_S_contig6261:6783..69481681463869.958726-CDS-Ecto-sp13_S_contig6261:6783..6948Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6261 6784..6948 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6261.16989.1

>prot_Ecto-sp13_S_contig6261.16989.1 ID=prot_Ecto-sp13_S_contig6261.16989.1|Name=mRNA_Ecto-sp13_S_contig6261.16989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=443bp
MKGCARSSRRKYRRPRPPVFSLALPTRLVRMATAMMTIAMATVKIGLVEA
KEDGGGAVPSVVIGAVPPSTETQQQSHNGIGSTTTHDRLRGSMTVPRPSL
MKSDEPYPWTGAGGKFGLDSDWREAAMMPGARGGEATMRGDNCMGDAKQR
QVREILERRANTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYD
DDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLG
DNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGG
HDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKS
MHNGQGCQCDVISVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKWL
MERDINSFKSDTITTWACATREVLSVVLEGGDLNKVLPVMDE*
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mRNA from alignment at Ecto-sp13_S_contig6261:1453..8349+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6261.16989.1 ID=mRNA_Ecto-sp13_S_contig6261.16989.1|Name=mRNA_Ecto-sp13_S_contig6261.16989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6897bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6261:1453..8349+ (Ectocarpus species13 EcNAP12_S_4_19m)
CACCCACCTGACGTTGAACTACACAGCAGAACACGTCTTCGAGTGAGGCT GCGCGGACGTGAACTGCACGGGGGCTGCAGCATCATCGGCGGCTTTCGGG CAGGCGGACTGTGGTCATTTATTGGAGAAACCTCCTCACTGACGGTATGT TGTCTATGTATAACTGCCGCTGCCATATATGTGCCCTTCTGAGCTGTTTC TCTTGTTCGTCTGGACCAATGTCCGGACAACTTGGTTGACACTTTTCGAG CACTTGAGTGAACTCGTGTCTGCGAACGCTTTGTGTAGGTTGTTGGACAG ATGATGTGCCTGGGATCGGGGTCCATGTATGTTGGATTCATGGAGGTTCA AGATCGCACACACACCCGGCGCTTTTTTCGTGGCCTGTCCCTCCCTCCCC TCTCCGCTCTTCCCTCGGTTTCAAATTCTAGAAACGACTGCCGTACCTCA AACTTTCGTACGGAATCAAATACGTGAGGGACCCACACACGCAGCAACCG TAGTAGCATACCATGGGGTACTCTGCTAAACACGTACCAGAGGTTCTTGC TTCACAGACGCTCTACAGGTGGCCTTGGTCCCCCATGCATGCGCAGAACA ATGAGCAGCAGTAGCAGCAGCAGAAATCCTACAGTACGGATATAAGCGTA CACGGTCGAGACTATCCTGTAAAATTGTGTCGCCGCATTTCCATCATCAA CCAGAAAATAACACATGGCTTGGGAGGTCTCTTTACAGACATATCTCGAA CATTGTATTAGTCATGTAGTCTGTGTTTGTGTTTTTATTTTTATTTTTAT TTTCTAATATGCACCTCTTGACCTAGGCGGTGGCCGCCGCGCGTCGATTG TTTGCTGACAGTGTATGTGCATAGATAACGTGTTGTCGAAGGACAGTGAG TACCATCGTGGACAAAAGACTTTAGAAAGCGTTACATAGTAGAGACGGAG AGATCATGTTGGCGATCGATCATTTCGGAGGACGGGGTCAGCGCCAACTA CATAACTACATAAAATCTCTACATCTCGACGGCGTGCAGTACGCGCCTGT GTTGGGCAGTGACGGCGAAAAAGTTGAGGAGGAAATCACAGATTATTCGT CCTTTCCAAAAAACAAAGGTACCCTCCCTCTCTTTGCATGGGTATGCATA CTTTTGTGCATATGCGTATGGGTCGCGCTTACTTTCGGGCTGCCGCAATC GATTTTCTCCGAAGAGTACATGCATGGTATGGTCGTTCGTACCAAAGCAT CCTCTTGTTGCATTTGCTTGAAAGTTTGAGGCCTACTCTTCTCCAGGCGC GCTCTGGTGCCACTCGGCACCTCGTTTCACCACAACCACTAATTATTATT TCGATGGCGTGTGGCGTGCATGTATGTAAATGAATGTGCTCGTTCAGGTT CGTTCGGCCACCAAAATGAAAGGCTGCGCGCGCAGCAGCCGTAGAAAGTA TCGAAGGCCGCGGCCGCCGGTGTTCAGCCTGGCTCTCCCCACACGGCTTG TGAGAATGGCTACGGCAATGATGACAATAGCCATGGCCACGGTCAAAATT GGATTAGTCGAGGCAAAGGAGGACGGAGGCGGTGCTGTCCCGAGTGTCGT CATCGGTGCAGTGCCGCCTTCAACAGAGACCCAACAGCAGTCCCACAACG GTATTGGTTCAACCACGACGCATGACAGGTGGGTTAGGGTAAGCTTTGCA AAGGGGGAGAGAGAACGAGAACGCTGCTTCCTTTTCATGTTGAGTTTGGT AAGTACACGTAGCGGCAGCTGATGCGCGTTCAAAAGGGGCGGGATTCCTA GATACACGAGGCTTGGTTTTGTTCTTCGGTCAACGGCTTGGAAACAAGGG TTAGTTGCGTGACTCAGTCGACCTTCCATCAGAACGTACCGTGTGCGCGA GTGTTTAGCTCCGAGAAACACATTCGCTCCTCCGCGGGCAAACGATCACC GTCACCAACACGCAGAAATTCTAATCTACGCCCGACGCGGTCGACCACGC CCCCACGGTCAACGCGCCTCAGGCTTCGCGGTTCTATGACGGTCCCGAGG CCTAGTCTGATGAAGAGCGATGAGCCCTACCCGTGGACAGGGGCGGGAGG AAAATTCGGGCTTGATTCAGACTGGAGAGAGGCCGCTATGATGCCTGGTG CGCGAGGGGGGGAGGCAACGATGAGAGGGGATAACTGCATGGGAGATGCG AAACAACGGCAAGTGCGGGAGATCTTGGAAAGGAGAGCCAACACTCCCGG TACTAGCAAGGTGTGGACAGGTTTCAGCTCACACGCACGCCCAGAGCAAC ACCACAGTCGCGCGCGAGCACATGTTGTCTGGGGTTGAGTCCGACGGACG TTATGAATAGTTGCTTAGCTTGCACGTAGGGGGAGAACGGATGGGATAGA AGAAGACCGGACCACAAGTCGGACAATGATCTTCAAGGGTTGTTTCTCGG ACCTACAGGAAGAAGGGCACTGCCATTTTAACGTTTGCCGCGATACCGGC CCAGTCTCACAATACAACCCGATAACGTATGAGTCCTCCTTAGCGTTAGG GTATCTTCTTGTGTACCAGCAAGCAAGCCCGCATTTCATTTGACGTAGAG TTGTGTGCTCTTTTCTCCGAAAAATGTGGAGCGTTTGCTTCCAGAGAAAG CAGACGAAGGTTGCCATGCCACGAAAAACCCTGCTCAAGGTGGGCGGCGA GCGAATTGTTAGGTCTACCGTATGCCTTTGCATTCGGTGCAGACCTACAC CGCACTCCGGTGCGTTCTCTGTTTCGTGTGGTTACGCGCCGTCCGTCCTG ATGCCACTACATGACCTAGCACCTTCTCTCCCAATTTCGCACTGACTGGC ATGAAGGTGGCGGCGTGCGTGAGAACGAAGGACTTCGGACGCTTCCTGCC CGAGTGGATCGCGTACCACTACGCGATAGGGGTCGACGAGATGACGATTT ACGACGATGATAGCAATGATAACACCGTGGAGATTCTCCAACCCTTCGTC GACGCCGGCATCGTTACGTACGTCCTGGAGAGGACCGGACAGTGAGTGTC GGCGGGCGTGCAATGCGTCGACACACGTACATACCGTAGGTGGCGCGGAG TAAGGTATCACACGCGCTGGACCGATTTTCAGATCGCGATTACCCGCCAA GAAAAGCATCGACGGTGCCGAAAATGTCGACACGAGAAACGCTTCGTCGA GAGCTTTCCGAAAACGTACAATTTGATTTCGGCGTCCTCTTCACCGTGGA GCTTTGAAAATCATTCTGGGGTGTGTGGTATCTTATGAAACCTACGGCAG CTTTTTTGACGAGTTTTCAACCAGGAGAAACGTAACGTAGCCAGGGCCAA GTTATGGACCCAGCGAGCCATAATGCCCGTCGCCAAGTCTACCCAGTTCT TCACAGACACGCGCTCGGCCGTCATTCGGGCCGCGGTACAAGGTACAATG CCCGAACTTTTGGAGCTCTGTAAACCGACGGAGAAAAATGGTGCCCTTGG TTGTCCTGCGCTTGTAGACTAGTCGAGTATGTATCCCACGTGCGTGTGAC GACGCAGCCCACCGCACGAACGATCGGTTCTCTCGAACACCGGCTACATG TCTGACGGATGTGGCTGTATTAGCATTGACTGACCACGGAGCGCCCGCTT ACGGTGTTCCCACCCTCGAAGTTGGCAGAACCAGATGACCCCGCTCAACC TGTGCCTGGAAGAGCACATGGTTCGACGGCTCGGCGACAACGATGCTCCG AGGTGGCTTCTGTTCCACGACACGGACGAGTACATAGTTCCCGTCGATAC AAGCGTTACGATCGCTCAGGCTCTGGACAAGCACAGCTCCACGTGCTGTG TACGGGTACGTGCAACTCTCCCGCCAGCAACACGAGAATTAACCGAAGTG GATGGTTGTGGACACTGACGTCATGCGTTTTCACGGCCATCCAAAGCGAA GTAGCGGACAACAGCACTCATCCGTTTCCTGCACGCGCTCGCCAGCACGG ATCATATGTATCGTTATGGGCCCCTCACGGCCGCACAGAAATGATTGCCG CTGCTGACTGCTGTTGTTGTTGGGGTAATTTGAAGGGCTTTTCCGCCGCC ACCAATCCTCTTTCCCTGTACTCGAACGATTGGAGGCCATCTACGGGCCT TTGCACCTCCTACACGTCCACATGTTCGACAACATCGGACAATCGTGTTT GTTTGTTGGGGTAGGTGTGCCTCTAGCGTGTGCGCGACTGCTCGTCGCCT ACTGAAGCGTCTTGATCCCGGGCAGGTGCCGCGCGTCACGTACGGGGCGG GAGGGCACGACGAGATGCCGCAGGGCCTGCTCCTGGAAATATTTCTGGAG CACGCCCATCTGCACGATTTCAAGAGGAACCGTCTACCCAAGGTGAGCGA AACCACCGGATGAAGCTTGCGTCCATCATTTCCCTGTTTGGCCGAGATGG TGATGCCAAAGGTGCTACGATACTAAAATATTATACAAACATGTCGGGGC TTATCATCGACACCATGCAGCAGACTTCTCACGATGTGGAATGCAGCGGT GCGCGGTCAGTGGCTGGTCGACGACTTATCGATGCTGTCATCGTTCCCTA TTGCAACGACTGGCGGGCATTGGCCGGTGATAAAACTGCTGTCCCTACAA GTAGTGGCGGACGTTTGTCTCTCCTTCTGGAGAACCTGACGCTGCAGGTG GGAAGCTCACAGCTGCTCTTTACTTGCAAGCGAGTGTCAGTGTACGGGTT ACAGGCATTGGTTGACTTCGGTTCGTTCTGACCTTGCCGCCTGGCAGGTT ATGGTAAACTTGGACACCACCCAACCGTTGCTGGGTCAGGCCACGTCCCA CTTGAAGAGCATGCACAACGGACAAGGCTGCCAATGTGACGTCATATCCG TCGACGAGATCCGCATCAACCACTACCTAGGCAGCCGAGGCGACTACTTA GGAAAAACGAAGCGGTACTGGCAGGTCAGTGGTGTTATTGGTGCTGCCTT CTACAAGTTTGTCTTTTGGCGTCTCGGGACGCTCGGGGGGCGCCGGAATT TCGTCGACTACAGTACTTTGAGTTAAACTAGCAACGAGACTTGTAACGTT ACTCGCCTGTAGTCGATAGGCACCGTACCATGCATGCTCCAACGAAGATT AGAGCACACTTAAATTGAAAAATACTCGTTACCTTCATGGCCGTCAGCTA GGTTTAGCGCACGGCCGTCAGCTAGGTTCAGCGCGCACATGGGATTTATC ATCAACCAAAATGCCTCTTTCTTCCCCCGCCGATGATGTTCGTGTGTTCC GCGTCCGATGCATACCGATTATCTCGGCCAGGAGGTGTACAGCAGAGACA AGGTAGAGAAATGGCTAATGGAGAGAGACATCAACAGCTTTAAGTCGGAC ACCATCACGACCTGGGCGTGTGCGACGCGAGAGGTTCTCTCGGTCGTTCT TGAGGGCGGCGACCTCAACAAAGTATTGCCCGTTATGGACGAATAATAAC ACTCTTCGACTTTTGGCTTAGGCACACACCTCGCAGTCTGCCTGCGGTCT AGCCTTTCTCATCTTTCGGACGCCCGCTTCCGCCTGCAGTTTCAATGCGG CTGGCGTGCGCAAAGGCGCTCCATTGTTGTTTGTTGGCGTGAGGATAGGT TTGGCAGTTGGCTGGTGGTTGCTGAGTACTTACGCGCCACTCGGCTGCGG TCGTTTCCTTGGGAGTGGAGTGGATTCCCCCCTCCTCACCCGCGTGCACG GATTCCCGTACGCTGTTGTTGAGGATGTATTCCCCACAACGCTTGCTGGC TCTCACGTAGGCGTGGGGGACCACCCGAACCTTGAAGTGAGGAAGGAGAA GGGGCAGAGGCGAGGAAACCGGATTTCGGAGAATTTTCATTGGACAGTTG GCTGGGCATCTCCAATTCAGCCTCGAGGTGGCCCAGGGGCACGCTATTTA ACAGTTTTGGTCTAGGTTGTGCATATTTCTTTCGTGGCTTAGGAATCGGC GAGTTATGTTGGTCTCTCCGATAATCGCGTAGGTTCAACATAATCTGACT GTATGTATGTGTTCGTTTACAGAATGAAATCGGTCATCATTTAACGGTTT TTACGCAAGTATTGTGAGCTGAAGGTTCCTTCTCTCTGCGTGAATGTATG TACATGGGAGCCGCTTGTGGCTTGAACATTTTTTTTACGGTGGGAGCGGA GTTTTTTTCGTTTCAGGCAACGTGAGAACCACTCGGCAAAAGGGGGGGGG CGGGCAAACGGCTGGCTCTGTAATGGTTTTGGGTATGACTGTGTCGGGCA GGTGCGATCGAACGTGGCGTTTTTCCTTCATGTGTACATGATTCGTAGAT GATTTTTTTTCTATTCGAAAATGGGAGCTTCGCTACAGATACTGTTTACG CGGACGGCCGGCCATATGTAGGATTGAGCTTCTGTCACCTGTGCAGGTCG AGATAATATGGTTGCACGACATCTACTGCGTGGTACGCACAACGAGCGAT CCGCTCTTCACCTCGGCAGTAGCCTTAGATGCCGCGTATTTAGAAAGAAG TACAATTTTGTGACAGTATCTGTAGGGTCCCCCAGAAACGGTTGCCAGCG AGACAAGGTCATGGTGGTGATCGAAAGCATTCGGGCTCGAAGATATTTTG ACGTGGGCGTATGTATAGTCGCACCCACAGTGCGCCATTTTTTGTCGTGC CGTTGATGGAGCGAGTCTTCAGCAGGTTGTGAGCTGGTTAGATAGACAAT TGCAACACGTGCCTGGGCTATCGAGATATTTTCGAGTAGTCTATGGATCT GGCATGAAAATGTCCCACGTACGGTAGTCCGAATGAGATAGATACGACAG GATCATTTAAGTCATATGTACGACGATGGCTGAAAAAACGAGCAGAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6261:1453..8349+

>mRNA_Ecto-sp13_S_contig6261.16989.1 ID=mRNA_Ecto-sp13_S_contig6261.16989.1|Name=mRNA_Ecto-sp13_S_contig6261.16989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1329bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6261:1453..8349+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAAGGCTGCGCGCGCAGCAGCCGTAGAAAGTATCGAAGGCCGCGGCC
GCCGGTGTTCAGCCTGGCTCTCCCCACACGGCTTGTGAGAATGGCTACGG
CAATGATGACAATAGCCATGGCCACGGTCAAAATTGGATTAGTCGAGGCA
AAGGAGGACGGAGGCGGTGCTGTCCCGAGTGTCGTCATCGGTGCAGTGCC
GCCTTCAACAGAGACCCAACAGCAGTCCCACAACGGTATTGGTTCAACCA
CGACGCATGACAGGCTTCGCGGTTCTATGACGGTCCCGAGGCCTAGTCTG
ATGAAGAGCGATGAGCCCTACCCGTGGACAGGGGCGGGAGGAAAATTCGG
GCTTGATTCAGACTGGAGAGAGGCCGCTATGATGCCTGGTGCGCGAGGGG
GGGAGGCAACGATGAGAGGGGATAACTGCATGGGAGATGCGAAACAACGG
CAAGTGCGGGAGATCTTGGAAAGGAGAGCCAACACTCCCGGTACTAGCAA
GGTGGCGGCGTGCGTGAGAACGAAGGACTTCGGACGCTTCCTGCCCGAGT
GGATCGCGTACCACTACGCGATAGGGGTCGACGAGATGACGATTTACGAC
GATGATAGCAATGATAACACCGTGGAGATTCTCCAACCCTTCGTCGACGC
CGGCATCGTTACGTACGTCCTGGAGAGGACCGGACATTGGCAGAACCAGA
TGACCCCGCTCAACCTGTGCCTGGAAGAGCACATGGTTCGACGGCTCGGC
GACAACGATGCTCCGAGGTGGCTTCTGTTCCACGACACGGACGAGTACAT
AGTTCCCGTCGATACAAGCGTTACGATCGCTCAGGCTCTGGACAAGCACA
GCTCCACGTGCTGTGTACGGGTGCCGCGCGTCACGTACGGGGCGGGAGGG
CACGACGAGATGCCGCAGGGCCTGCTCCTGGAAATATTTCTGGAGCACGC
CCATCTGCACGATTTCAAGAGGAACCGTCTACCCAAGGTTATGGTAAACT
TGGACACCACCCAACCGTTGCTGGGTCAGGCCACGTCCCACTTGAAGAGC
ATGCACAACGGACAAGGCTGCCAATGTGACGTCATATCCGTCGACGAGAT
CCGCATCAACCACTACCTAGGCAGCCGAGGCGACTACTTAGGAAAAACGA
AGCGGTACTGGCAGGAGGTGTACAGCAGAGACAAGGTAGAGAAATGGCTA
ATGGAGAGAGACATCAACAGCTTTAAGTCGGACACCATCACGACCTGGGC
GTGTGCGACGCGAGAGGTTCTCTCGGTCGTTCTTGAGGGCGGCGACCTCA
ACAAAGTATTGCCCGTTATGGACGAATAA
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