mRNA_Ecto-sp13_S_contig6261.16989.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: A0A6H5KFX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFX9_9PHAE) HSP 1 Score: 793 bits (2047), Expect = 2.110e-280 Identity = 379/412 (91.99%), Postives = 396/412 (96.12%), Query Frame = 1
Query: 253 MATAMMTIAMATVKIGLVEAKEDGGGAVPSVVIGAVPPSTETQQQSHNGIGSTTTHDRLRGSMTVPRPSLMKSDEPYPWTGAGGKFGLDSDWREAAMMPGARGGEATMRGDNCMGDAKQRQVREILERRANTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQCDVISVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKWLMERDINSFKSDTITTWACATREVLSVVLEGGDLNKVLPVMDE 1488
MA AMMT+AMATV +G VEAK+DGG AVP VVIGAVPPSTE QQQSH+ +GSTTTHDRLRGSMTVPRP L++SDEPYPWTGAGGKFGL SDWREAAMMPGARGGEATMRGD+CMGDAKQRQVREILERRA TPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSND+TVEILQPFVDAGIVTY+LERTGHW+NQMTPLNLCLEEHMVRRLGDN+APRWLLFHDTDEY+VPVDTSVTIAQALDKHS+TCCVRVPRVTYGAGGHDEMPQGLLLE+FL+HAHLHDFK NRLPKV VNLDTTQPLLGQA S LKSMHNGQGCQCDVI VDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKWL+ERDINSFKSDTITTWACATREVLSVVLEG DLNKVLPVMDE
Sbjct: 1 MAMAMMTVAMATVIVGFVEAKDDGGVAVPGVVIGAVPPSTEGQQQSHSSVGSTTTHDRLRGSMTVPRPRLLESDEPYPWTGAGGKFGLTSDWREAAMMPGARGGEATMRGDSCMGDAKQRQVREILERRAKTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDDTVEILQPFVDAGIVTYILERTGHWENQMTPLNLCLEEHMVRRLGDNEAPRWLLFHDTDEYVVPVDTSVTIAQALDKHSATCCVRVPRVTYGAGGHDEMPQGLLLEVFLQHAHLHDFKSNRLPKVAVNLDTTQPLLGQARSRLKSMHNGQGCQCDVIPVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKWLLERDINSFKSDTITTWACATREVLSVVLEGSDLNKVLPVMDE 412
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: A0A6H5KB75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB75_9PHAE) HSP 1 Score: 374 bits (960), Expect = 8.100e-116 Identity = 190/354 (53.67%), Postives = 236/354 (66.67%), Query Frame = 1
Query: 442 TVPRPSLMKSDEPYPWTGAGGKFGLDSDWREAAMMPG------ARGGEATMRGDNCMGDAKQRQVREILERRAN-TPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRL-GDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQC---DVISVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVE-KWLMERDINSFKSDTITTWACATREVLSVVLEGGDLNK 1467
T+ + + + W GAGG+FGL +DWREA +PG A GE G C+ + KQ +VREILE+R + T++VA C+RTKDF RFLPEWIA+HYA+GVDE+ IYDDDS DNT E+L+PFV+AGIV Y+ E QM PLN CLE+H+ RR GD DA W+LFHDTDEY+ P DTS+ I AL+KH TCC V RV YG+ GHDEMP+GLLLE FL H+H N LPKVMVNLD ++P LG L+SMHN +GC C V +RINHYLGS GDY+ +T RYW+E + K ++ RDIN ++SD I WACATREVL ++EG DL K
Sbjct: 134 TLQENATGAASDTGQWRGAGGEFGLSADWREALSVPGGGDDEGAGAGEGLRGGGACLAEKKQAEVREILEKRGTASTTTNRVAVCLRTKDFARFLPEWIAFHYALGVDEIMIYDDDSTDNTKEVLRPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQHLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGQQFGNGLPKVMVNLDPSEPELGVVEPPLRSMHNAEGCDCAGSKSSGVSNLRINHYLGSIGDYMDRTARYWEEKKQGEMAAAKTVLHRDINDYRSDDIEHWACATREVLFRIVEGLDLEK 487
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: D7FYE9_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE9_ECTSI) HSP 1 Score: 311 bits (796), Expect = 9.990e-95 Identity = 155/272 (56.99%), Postives = 189/272 (69.49%), Query Frame = 1
Query: 661 KVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRL-GDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQC---DVISVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVE-KWLMERDINSFKSDTITTWACATREVLSVVLEGGDL 1461
KVA C+RTKDF RFLPEWIA+HYA+GVDE+ IYDDDS DNT E+L PFV+AGIV Y+ E QM PLN CLE+ + RR GD DA W+LFHDTDEY+ P DTS+ I AL+KH TCC V RV YG+ GHDEMP+GLLLE FL H+H N L KVMVNLD ++P +G L+SMHN +GC C V ++RINHYLGS GDY+ +T RYW+ + K ++ RDIN+++SD I WACATREVL ++EG DL
Sbjct: 2 KVAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIVRYIFEVIFDRMTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHHRTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGLAKVMVNLDPSEPEVGVVEPPLRSMHNAEGCDCAGSKFGGVSDLRINHYLGSIGDYMDRTTRYWEAKKKGEMAAAKTVLRRDINNYRSDDIEHWACATREVLFRIVEGLDL 273
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: D7FLX6_ECTSI (Glycosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLX6_ECTSI) HSP 1 Score: 316 bits (809), Expect = 1.170e-94 Identity = 172/389 (44.22%), Postives = 224/389 (57.58%), Query Frame = 1
Query: 316 EDGGGAVPSVVIGAVPPSTETQQQSHNGIGSTTTHDRLRGSMTVPRPSLMKSDEPYPWTGAGGKFGLDSDWREAAMMPGARGGEATMRGDNCMGDAKQRQVREILERRANTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGD-NDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQCDVISVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKW-LMERDINSFKSDTITTWACATREVLSVVLEGGDLNKVLP 1476
E G VP+V +G P+ Q + + S ++ P W G GG FG+D DWR A G G E +RG+ CM +++V A C+RTKD+GRFLPEW+A+HYAIGVDE++IYDD+S D T E+L+PFV AGIV Y+ + QM PLN CL ++ R+ D +AP WLLFHD DEY+ P DTS+T+ AL+KH STCC V R+ YG+GGHDEMP+GL+++ F+ AH +D + PKV+VNL T+ LKSMH +GC C + E+ INHYLGSRGDYL + RYW + D L +RD+N SDTIT W+C+TREVL V G DL LP
Sbjct: 95 EASGQGVPTVELGEELPTQSPQSKDE-------------------KKSDDSTEPPESWKGRGGPFGIDGDWRNALQEDGGDGAENGLRGEACMTHENRKEV----------------AVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRYIFDMIPRRNAQMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNKHESTCCALVRRIQYGSGGHDEMPRGLVMDSFM--AHQNDSSHHANPKVVVNLTPTES--DPVAPPLKSMHKAEGCACLDLK-QEVLINHYLGSRGDYLERVHRYWSTYMAGDNDPGHRLSQRDVNDRVSDTITHWSCSTREVLYRVDNGLDLQTGLP 443
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: A0A6H5JE36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE36_9PHAE) HSP 1 Score: 139 bits (349), Expect = 2.460e-31 Identity = 78/181 (43.09%), Postives = 108/181 (59.67%), Query Frame = 1
Query: 652 GTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVE----ILQPFVDAGIVTYVLERTGHWQNQMTP-------LNLCLEEHM-VRRLGDNDAPRWLLFHDTDEYIVPVDTS-VTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVM 1155
G +V +C RTKD GR+LPEW+AYH+A+GVDEM I+DDDS D+T E +L+PFV AGIV + TP L C+E + + GD APRW++ DTDEY+ + + + +AL+ S+TCC++V V +G G + P+GLLLE FL HA + N PKV+
Sbjct: 247 GFEQVVSCTRTKDRGRYLPEWVAYHWAMGVDEMNIFDDDSVDDTREARIFVLEPFVRAGIVKFQRRHIDPRNATSTPPSAAMPPLTECVESYRGMHDWGDRLAPRWVVLLDTDEYLWAREAGKIGLPEALEARSTTCCLQVSTVQHGTSGFSKSPRGLLLENFLTHADPTSPELNGPPKVL 427
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: A0A520BS46_9SPHI (Glycosyltransferase family 92 protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A520BS46_9SPHI) HSP 1 Score: 105 bits (261), Expect = 5.060e-21 Identity = 83/272 (30.51%), Postives = 127/272 (46.69%), Query Frame = 1
Query: 625 ILERRANTPGTSK--VAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHW---QNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQCDVISV-----------DEIRINHY-LGSRGDYLGKTKRYWQEVYSRDKVEKWLMERDINSFK 1389
+L+ R N K +A C K+ G + EWI +H +GV++ IYD++S DNT EIL P+V+ G+V Y+ W + Q+ + CLE+H + RWL D DE+I P+ +TI L H V + + YG+GG E QG ++E F +H+ L + NR K +VN +G H + +G+ + D IRINHY + S ++L K R V ++ + E D+N K
Sbjct: 37 MLKMRRNKSAKPKHYLAICAIAKNEGPYFEEWITWHQKLGVEKFYIYDNESTDNTREILAPYVETGLVDYIF-----WPGLKQQLITYDDCLEKHRL-------DTRWLAVIDMDEFIKPIQ-DLTITDFLKNHEDVPAVEINWLVYGSGGAKEKEQGSIMERFKKHS-LPNHYLNRHIKSIVNPRRVFTFIG---CHEVARMSGKTVDPHGNPIQKHFRDREPQHDVIRINHYAVKSYDEFLQKRARGRARVLDERGLD-YFEEYDLNDIK 290
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: A0A2E1N3H0_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E1N3H0_9FLAO) HSP 1 Score: 102 bits (255), Expect = 1.750e-20 Identity = 82/256 (32.03%), Postives = 130/256 (50.78%), Query Frame = 1
Query: 664 VAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVN-------LDTTQPLLGQATSHLKSMHNGQGCQC-DVISV-DEIRINHY-LGSRGDYLGKTKRYWQEVYSRDKVEKWLMERDINSFKSDTI 1401
+ C K+ GR+L EWI YH +GV++ IYD++S DNT+EILQP++D+ +V Y + Q+ C+ +H R+L F D DE+IVP+ TI L S V++ + YG+GG +GL++E F +H+ D K N KV++N +P++ ++ S N Q D I V D+IRINHY + S ++L K R + + R + + ++N K+D+I
Sbjct: 14 ITLCAIAKNEGRYLKEWIEYHKMMGVEKFFIYDNESTDNTLEILQPYIDSNLVDYCYFPGK--KMQLKAYADCVRKHKRNT-------RYLGFLDIDEFIVPIKHK-TIPDYLRSLGSFSGVQINWLVYGSGGAKRREKGLVMERFKDHS-FSDHKLNHHIKVILNPRLILRFFSAHRPVI--FGRYIDSNGNVTKKQFWDRIPVSDQIRINHYAIKSYEEFLEKRSR-GRARFDRKRGLDYFDNYNLNDIKNDSI 255
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: UPI0013D35659 (glycosyltransferase family 92 protein n=1 Tax=Bacteroides sp. 214 TaxID=2302935 RepID=UPI0013D35659) HSP 1 Score: 102 bits (255), Expect = 2.870e-20 Identity = 73/242 (30.17%), Postives = 120/242 (49.59%), Query Frame = 1
Query: 628 LERRANTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQCDVISV-----------DEIRINHY-LGSRGDYLGKTKR 1317
L+R +TP +A C K+ G ++ EWI +H +GV++ IYD++S DNT E+L P++++G+V Y L + Q+ + CLE + + RW+ D DE+I+P+ TI + L + V + + YG+GG E +G ++E F H+ L + NR K +VN +G H + +G+ + + D IRINHY + S ++LGK R
Sbjct: 40 LKREKDTPIRYYLAVCAIAKNEGAYMVEWIEHHRKLGVEKFYIYDNESTDNTREVLAPYIESGLVAYHL--FPGTKQQLPAYDHCLEHYRMEA-------RWIAVIDLDEFILPLKDK-TIPEFLKRFEEFPVVEINWLLYGSGGAKEKVEGTVMERFKRHS-LPNHISNRHVKSIVNPRRVFNFIG---CHEAARISGKAADSHGMPITKNFRDREPQQDVIRINHYAVKSYEEFLGKRAR 267
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: UPI001408A856 (glycosyltransferase family 92 protein n=1 Tax=Perlabentimonas gracilis TaxID=2715279 RepID=UPI001408A856) HSP 1 Score: 102 bits (255), Expect = 3.550e-20 Identity = 75/230 (32.61%), Postives = 119/230 (51.74%), Query Frame = 1
Query: 664 VAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVNLDTTQPLLGQATSHLKSMHNGQGCQCDVISV-----------DEIRINHY-LGSRGDYLGKTKR 1317
+ C K+ G + EWI +H A GV++ IY+++S DNT+E+LQP++D+GIV Y TG + Q T N CL+++ DA RW+ F D DE+IVP+ T +I + L V + + YG+GG G +++ F H++ + + NR K +VN + L +SH ++ +G + V D+IRINHY + S ++L K R
Sbjct: 55 LTVCAIAKNEGAYFKEWIEWHLAHGVEKFYIYNNESTDNTIEVLQPYIDSGIVEYHFI-TGK-RKQTTAYNHCLKQYRY------DA-RWIAFIDLDEFIVPIKTK-SIPEFLKPFEGFAAVEINWLCYGSGGAKTRMLGGVMDRFRTHSYPNS-QLNRHIKSIVN---PRLALNFLSSHHPTLLSGHAADTNGHKVRKYFFQREPLHDKIRINHYAVKSFEEFLEKKAR 270
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Match: R5PZS6_9PROT (Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:977 TaxID=1262685 RepID=R5PZS6_9PROT) HSP 1 Score: 102 bits (254), Expect = 3.580e-20 Identity = 68/241 (28.22%), Postives = 120/241 (49.79%), Query Frame = 1
Query: 616 VREILERRANTPGTSKVAACVRTKDFGRFLPEWIAYHYAIGVDEMTIYDDDSNDNTVEILQPFVDAGIVTYVLERTGHWQNQMTPLNLCLEEHMVRRLGDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDKHSSTCCVRVPRVTYGAGGHDEMPQGLLLEIFLEHAHLHDFKRNRLPKVMVN------LDTTQPLLGQATSHLKSMHNGQGCQCDVISVDEIRINHYLG-SRGDYLGKTKR 1317
+R L++ N+ ++ C K+ +LPEWI ++ +GV++ IYD++S+DNT E+L+P++D G V Y + G Q Q+ N ++++ + +WL F D DE+++P+ T TI + L + C V + + YG GH GL+LE F H+ F N+ K + N +D + + ++ G + + +IR+NHY G S +++ K R
Sbjct: 1 MRRRLKKEKNSEFPQYLSLCAIVKNEAPYLPEWIEFYKLVGVEKFYIYDNESSDNTKEVLKPYIDTGDVVYTYQ-PGQAQ-QLVAYNDAVKKY-------KNETKWLGFFDLDEFVMPLSTK-TIPEFLKDYEEECGVVIYWLVYGDNGHKTKTDGLVLERFTAHSE-EGFGVNKYLKTIANPREIKRMDVHYAVYRGGFAKDENGSFRPGGMGEYPQIKKIRMNHYFGKSFEEFMQKRNR 230 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6261.16989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6261.16989.1 >prot_Ecto-sp13_S_contig6261.16989.1 ID=prot_Ecto-sp13_S_contig6261.16989.1|Name=mRNA_Ecto-sp13_S_contig6261.16989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=443bp MKGCARSSRRKYRRPRPPVFSLALPTRLVRMATAMMTIAMATVKIGLVEAback to top mRNA from alignment at Ecto-sp13_S_contig6261:1453..8349+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6261.16989.1 ID=mRNA_Ecto-sp13_S_contig6261.16989.1|Name=mRNA_Ecto-sp13_S_contig6261.16989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6897bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6261:1453..8349+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6261:1453..8349+ >mRNA_Ecto-sp13_S_contig6261.16989.1 ID=mRNA_Ecto-sp13_S_contig6261.16989.1|Name=mRNA_Ecto-sp13_S_contig6261.16989.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1329bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6261:1453..8349+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |