mRNA_Ecto-sp13_S_contig6256.16982.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6256.16982.1
Unique NamemRNA_Ecto-sp13_S_contig6256.16982.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6256.16982.1 vs. uniprot
Match: A0A6H5K5X9_9PHAE (Uroporphyrinogen decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5X9_9PHAE)

HSP 1 Score: 655 bits (1689), Expect = 1.500e-235
Identity = 332/341 (97.36%), Postives = 334/341 (97.95%), Query Frame = 1
Query:    7 APPSSLSQAGRYMSAFRKYSDKYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYANLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAKEATYASVLDREEAPTPVA 1029
            AP   + QAGRYMSAFRKYSD YPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYA+LAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLG SVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAKEATYASVLDREEAP PVA
Sbjct:   96 APVWLMRQAGRYMSAFRKYSDSYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGASVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAKEATYASVLDREEAPAPVA 436          
BLAST of mRNA_Ecto-sp13_S_contig6256.16982.1 vs. uniprot
Match: A0A7S2UYW2_9STRA (Uroporphyrinogen decarboxylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYW2_9STRA)

HSP 1 Score: 460 bits (1183), Expect = 4.390e-159
Identity = 221/325 (68.00%), Postives = 264/325 (81.23%), Query Frame = 1
Query:   22 LSQAGRYMSAFRKYSDKYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYANLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAKEATYASV 996
            + QAGRYM AFR+YSDKYPFR RSETPEIA+ELSLQPW+ FGVDGVIMFSDILTPLPS+GV+FDV+KG GPVISNP+RT AD+E +  + D   KL FVGETL+AL+ E EGK+TL+GF+GAPWT+AAYS EGGSSK+ + TKKMMME P LF  LM  LA ++ DYACYQVENGAQV+Q+FESWAHQ+ P+ F TFAKPYA+L M ++K+R+PDVPVIYFANGGSSYLE Q D  ADMI +D  V+M  AR+RLG   P+SGNVDPLVLLGP  GI +AV  C++  G SGHILNLGHGV+Q TPE +V   V++AK  + A +
Sbjct:   76 MRQAGRYMKAFREYSDKYPFRVRSETPEIAVELSLQPWKAFGVDGVIMFSDILTPLPSLGVEFDVIKGHGPVISNPLRTAADIEQMTPLGDPSDKLGFVGETLQALKKEVEGKTTLVGFIGAPWTMAAYSCEGGSSKNCMITKKMMMEQPQLFDRLMNHLAVNLADYACYQVENGAQVLQIFESWAHQLSPAFFSTFAKPYADLTMKLIKERYPDVPVIYFANGGSSYLERQSDMNADMICVDWAVDMAQARQRLGKDKPISGNVDPLVLLGPKEGIVQAVTDCIKGGGGSGHILNLGHGVVQQTPEEAVGLFVETAKSISTAEI 400          
BLAST of mRNA_Ecto-sp13_S_contig6256.16982.1 vs. uniprot
Match: A0A6T5PC14_HETAK (Uroporphyrinogen decarboxylase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5PC14_HETAK)

HSP 1 Score: 426 bits (1096), Expect = 6.440e-146
Identity = 209/323 (64.71%), Postives = 256/323 (79.26%), Query Frame = 1
Query:   22 LSQAGRYMSAFRKYSDKYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVM---EDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYANLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSG--HILNLGHGVLQTTPESSVAALVDSAK 975
            + QAGRYM+ FRKYSDK PFR RSETPEIA ELSLQ WR +G+DGVIMFSDILTPLP  G+++DVVKG GP I +PIRTKA VEA+  +    +I+  L FVGETL+ LR+ETEGK++L+GF+GAPWTLAAY+ EGGSSKH +  K+MMM++P LFH+ + KLA  +G+YACYQ+ENGAQVIQVFESWAHQ+ P  FE FAKPYA   M  +K +HPDVPVIYFANGGSSYLE Q+D ++DM+ +D  V+M  AR  LG   P+SGN+DP+VLLG  + I+ AVR CV  AG  G  H+LNLGHGV+Q TPE++VA LVD+AK
Sbjct:   68 MRQAGRYMADFRKYSDKLPFRERSETPEIATELSLQCWRAYGMDGVIMFSDILTPLPGFGIEWDVVKGKGPQIKDPIRTKAQVEALTSLGGSAEIEATLGFVGETLRNLRAETEGKTSLLGFIGAPWTLAAYATEGGSSKHCMVIKQMMMKEPELFHTYLGKLAEDMGNYACYQIENGAQVIQVFESWAHQLSPFFFEHFAKPYAQKTMETIKAKHPDVPVIYFANGGSSYLELQKDMKSDMLCVDWAVDMAQARRTLGPDAPISGNIDPMVLLGTEADIRRAVRDCVAGAGGPGNRHVLNLGHGVVQQTPEAAVATLVDAAK 390          
BLAST of mRNA_Ecto-sp13_S_contig6256.16982.1 vs. uniprot
Match: A0A7S2BY39_9STRA (Uroporphyrinogen decarboxylase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BY39_9STRA)

HSP 1 Score: 422 bits (1086), Expect = 2.350e-144
Identity = 216/320 (67.50%), Postives = 251/320 (78.44%), Query Frame = 1
Query:   22 LSQAGRYMSAFRKYSDKYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYANLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSG-HILNLGHGVLQTTPESSVAALVDSAKE 978
            + QAGRYM  FR YSDKYPFR RSETPE+A ELSLQ WR FG+DGVIMFSDILTPLP+MG++FD+VKG GPVISNP R+   V A++ +ED    LPFVGETLK LRSETEG++TLIGFVG+P+TLAAYS+ G + K  + TKKMM   P L H+L+  LA +IGDYACYQVE+GAQVIQ FESWAH + P+QF+ FAKPYAN AMSILK +HPDVPVIYFANGGSSYLE Q D   D + LD  V++  AR  LG S PVSGNVDPLVLL P   I+E VRS +  AG  G H+LNLGHGV+Q TPES+VAA VD AK+
Sbjct:   82 MRQAGRYMKDFRAYSDKYPFRQRSETPEMATELSLQCWRAFGMDGVIMFSDILTPLPAMGIEFDMVKGKGPVISNPPRSPEAVAALKPLEDPATSLPFVGETLKNLRSETEGRATLIGFVGSPFTLAAYSVNGMADKSCIETKKMMFHAPELLHALLDHLATAIGDYACYQVEHGAQVIQYFESWAHHLTPAQFDVFAKPYANKAMSILKAKHPDVPVIYFANGGSSYLELQTDMACDNLCLDHHVDISVARTILG-SKPVSGNVDPLVLLAPEERIREEVRSNIMAAGGPGKHLLNLGHGVIQGTPESAVAAFVDEAKQ 400          
BLAST of mRNA_Ecto-sp13_S_contig6256.16982.1 vs. uniprot
Match: A0A836CKK7_9STRA (Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKK7_9STRA)

HSP 1 Score: 422 bits (1085), Expect = 3.820e-144
Identity = 209/329 (63.53%), Postives = 254/329 (77.20%), Query Frame = 1
Query:   22 LSQAGRYMSAFRKYSDKYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVME---DIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGS---SKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYANLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAKEATYA 990
            + QAGRYM  FR YSDKY FRHRSETPEIAIELSLQPWR FGVDGVIMFSDILTP P+MGV+FD+VKG GP  ++P+RT AD+ A++++    DID  LPFVG+TL+ALR ETEG +TL+GFVGAPWTL AY++EG +   +  A H + MM  DP LF   MTKLA S+G+YACYQ E GAQVIQ FESWAH+M  + FE + +PYA ++M+++++RHP VPVIYFANGGS+YLES R  + +MI LDQ V +  AR RLG  VPVSGNVDP VLL     I+ AV+ CV  AG  GHILNLGHGV+Q TPE++VAA VD+AK+  YA
Sbjct:   73 MRQAGRYMKDFRAYSDKYAFRHRSETPEIAIELSLQPWRAFGVDGVIMFSDILTPFPAMGVEFDIVKGKGPAFASPVRTAADIAAMKILGEQVDIDAALPFVGQTLRALRKETEGGATLLGFVGAPWTLGAYAMEGSAPAEAGRAPHMRAMMDADPRLFGEYMTKLAVSVGEYACYQAEQGAQVIQFFESWAHRMTVADFEKWGRPYAEMSMNMVRERHPGVPVIYFANGGSAYLESMRGMKCNMIGLDQHVLIDDARRRLGADVPVSGNVDPDVLLESEDAIRAAVQDCVARAGPRGHILNLGHGVMQQTPEAAVAAFVDAAKQTRYA 401          
BLAST of mRNA_Ecto-sp13_S_contig6256.16982.1 vs. uniprot
Match: A0A7S0N122_9CRYP (Uroporphyrinogen decarboxylase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N122_9CRYP)

HSP 1 Score: 420 bits (1080), Expect = 4.310e-143
Identity = 201/322 (62.42%), Postives = 255/322 (79.19%), Query Frame = 1
Query:   22 LSQAGRYMSAFRKYSDKYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYANLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAKEATY 987
            + QAGRYM AF++YSDKYPFR RSETP+IAIELSLQP++ FG DGVIMFSDILTPLPSMG++FDVVKG+GPVI +PIR+   V  ++ ++D D   PF+   L +LR ETEGK+TL+GFVG+P+TLAAY+IEG ++K+   TKKMM  +PAL HS+++ +A+SIG YAC+QV++GAQV+Q+FESWAH + P  F  FAKPYA+   + +K +HP VP+IYFANGGSSYLE QRD +ADMI +D  V+M  AR  LG  VP+SGNVDPLVL+GP   I+E+VR C+R  G  GHILNLGHGV++ TPE++VAA VD AK   Y
Sbjct:  102 MRQAGRYMKAFKEYSDKYPFRVRSETPDIAIELSLQPFKAFGTDGVIMFSDILTPLPSMGIEFDVVKGSGPVIFDPIRSAVQVSKLKKIDDPDKTTPFLRTILSSLRKETEGKTTLLGFVGSPFTLAAYAIEGKANKNCYQTKKMMYNNPALLHSILSHIADSIGVYACHQVDSGAQVLQLFESWAHHLGPDDFSVFAKPYADRVAAAIKAKHPTVPIIYFANGGSSYLERQRDMKADMIGVDWAVDMAEARRILGPGVPISGNVDPLVLMGPEEKIRESVRDCIRKGGGQGHILNLGHGVIEPTPEAAVAAFVDEAKRFRY 423          
BLAST of mRNA_Ecto-sp13_S_contig6256.16982.1 vs. uniprot
Match: W7UA58_9STRA (Uroporphyrinogen decarboxylase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA58_9STRA)

HSP 1 Score: 421 bits (1081), Expect = 5.030e-143
Identity = 211/336 (62.80%), Postives = 258/336 (76.79%), Query Frame = 1
Query:   22 LSQAGRYMSAFRKYSDKYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYANLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAK--EATYASVLDREEAPTP 1023
            + QAGRYM+AFR+YS+KYPFR RSETP +AIELS+QP   FGVDGVIMFSDILTPLP++G++FDV+ G GPVI N I T  DV+ VR ++D    LPFVGETL+ L++E  G++TL+GFVGAP+TLAAY+IEGGSSK+ L TK+MMM DP L H  + KLA +IGDYACYQ+ENGA+VIQVFESWAHQ+ PSQF  ++KPYA+   +I+K+RHP+VP+I+F +G SS+LE Q D  ADMI LD  V+M +AR  LG   PVSGNVDP VLLGP  GI  AV  CVR AG  GHILNLGHGV++TTPE +V   VD+AK  E   AS     + P P
Sbjct:   95 MRQAGRYMAAFREYSEKYPFRQRSETPSMAIELSMQPLEAFGVDGVIMFSDILTPLPALGIEFDVISGKGPVIPNRIATAMDVDNVRRLDDPASSLPFVGETLRTLKNEVAGRATLLGFVGAPFTLAAYTIEGGSSKNCLKTKRMMMYDPTLLHVYLDKLATAIGDYACYQIENGAEVIQVFESWAHQLSPSQFLKYSKPYADKVTTIVKERHPEVPIIFFGHGASSFLELQGDMAADMICLDWQVDMATARRTLGAK-PVSGNVDPTVLLGPPEGIVAAVDECVRKAGGGGHILNLGHGVIKTTPEDAVRLFVDTAKSIELKAASRESGSDGPPP 429          
BLAST of mRNA_Ecto-sp13_S_contig6256.16982.1 vs. uniprot
Match: L1K3R9_GUITC (Uroporphyrinogen decarboxylase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1K3R9_GUITC)

HSP 1 Score: 415 bits (1066), Expect = 1.050e-141
Identity = 200/332 (60.24%), Postives = 259/332 (78.01%), Query Frame = 1
Query:    7 APPSSLSQAGRYMSAFRKYSDKYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYANLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAKEATYASVLD 1002
            AP   + QAGRYM AFR+YSDKYPFR RSETPEIAIELSLQPW+ FG DGVIMFSDILTPLPSMG++FDVVKG+GPVI +PIR+   +++++ ++D D  +PF+ E L++LR ET+GK+TL+GFVG+P+TLAAYS+EG + K+   TKKMM   P + H+ +  +A +I  YA +Q++ GAQV+QVFESWAH + P  F  F KPYA+ A+S++KQ+HP+VP+IYFANGGSSYLE QRD +ADMI +D  ++M +AR+ LG   P+SGNVDPL+L+G  S I+EAVR CV  A    HILNLGHGV+Q TPES+VAA VD AK+  +A   +
Sbjct:   43 APVWLMRQAGRYMKAFREYSDKYPFRQRSETPEIAIELSLQPWKAFGTDGVIMFSDILTPLPSMGIEFDVVKGSGPVIFDPIRSMDQIKSLKPIDDPDASVPFLREILQSLRKETDGKTTLLGFVGSPFTLAAYSVEGKADKNCFQTKKMMYNQPEILHAFLDHIAENIAAYAIHQIDCGAQVLQVFESWAHHLSPEDFLIFGKPYADKAISLIKQKHPNVPIIYFANGGSSYLELQRDMKADMICVDWKIDMATARKTLGDK-PISGNVDPLILMGKESKIREAVRDCVHKARGVPHILNLGHGVIQPTPESAVAAFVDEAKKINFAQTKE 373          
BLAST of mRNA_Ecto-sp13_S_contig6256.16982.1 vs. uniprot
Match: A0A7S2FRM6_9EUKA (Uroporphyrinogen decarboxylase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FRM6_9EUKA)

HSP 1 Score: 413 bits (1062), Expect = 1.100e-140
Identity = 201/319 (63.01%), Postives = 256/319 (80.25%), Query Frame = 1
Query:   22 LSQAGRYMSAFRKYSDKYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYANLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSG-HILNLGHGVLQTTPESSVAALVDSAK 975
            + QAGRYM AFR++S    FR RSETP+IA ELSLQPWR +GVDGVIMFSDILTPLP++G++FDVV+G+GPVIS+P+RT ADV A+  ++D + KLPF+ E L  LR ETEG+STL+GFVGAP+TL AY++EG +++H +H+KKMMM +P + H+ +  LA +IG+YACYQ+E+GAQ IQ FESWAH + P+QF TFAKPYA+ AM+ +K RHPDVPV+Y+ANGGSSYLE QRD  AD+ISLD  V+MR ARE LG    V GNVDP VL G  + I++AV + + +AG +G HILNLGHGVLQ TPE +VAA V++AK
Sbjct:   85 MRQAGRYMGAFREFSTTIEFRQRSETPDIATELSLQPWRAYGVDGVIMFSDILTPLPALGIEFDVVRGSGPVISSPLRTLADVAAMTPLDDPEAKLPFIREILGNLRRETEGRSTLLGFVGAPFTLVAYAVEGQANRHCIHSKKMMMNNPEVLHAALDNLAVAIGEYACYQIESGAQAIQFFESWAHHLSPAQFATFAKPYADRAMAYVKARHPDVPVLYYANGGSSYLELQRDMAADVISLDWAVDMRVARETLGSGRLVQGNVDPTVLFGTEAQIRDAVHANIAEAGGTGKHILNLGHGVLQGTPEEAVAAFVNAAK 403          
BLAST of mRNA_Ecto-sp13_S_contig6256.16982.1 vs. uniprot
Match: A0A4D9CWJ7_9STRA (Uroporphyrinogen decarboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWJ7_9STRA)

HSP 1 Score: 421 bits (1081), Expect = 3.970e-139
Identity = 212/336 (63.10%), Postives = 257/336 (76.49%), Query Frame = 1
Query:   22 LSQAGRYMSAFRKYSDKYPFRHRSETPEIAIELSLQPWRTFGVDGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDIDGKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYANLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLDQFVNMRSARERLGGSVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAK--EATYASVLDREEAPTP 1023
            + QAGRYM+AFR+YS+KYPFR RSETP +AIELS+QP   FGVDGVIMFSDILTPLP++G++FDV+ G GPVI N I T  DV+ VR ++D    LPFVGETL+ L+ E  G++TL+GFVGAP+TLAAY+IEGGSSK+ L TK+MMM DP L H  + KLA +IGDYACYQ+ENGA+VIQVFESWAHQ+ PSQF  ++KPYA+   +I+K+RHP+VP+I+F +G SS+LE Q D  ADMI LD  V+M +AR  LG   PVSGNVDP VLLGP  GI  AV  CVR AG  GHILNLGHGV++TTPE +V   VD+AK  E   AS     E P P
Sbjct:  386 MRQAGRYMAAFREYSEKYPFRQRSETPSMAIELSMQPLEAFGVDGVIMFSDILTPLPALGIEFDVISGKGPVIPNRIATAMDVDNVRRLDDPARSLPFVGETLRTLKKEVAGRATLLGFVGAPFTLAAYTIEGGSSKNCLKTKRMMMYDPTLLHVYLDKLATAIGDYACYQIENGAEVIQVFESWAHQLSPSQFLKYSKPYADKVTAIVKERHPEVPIIFFGHGASSFLELQGDMAADMICLDWQVDMATARRTLGAK-PVSGNVDPTVLLGPPEGIVAAVDECVRKAGGGGHILNLGHGVIKTTPEDAVRLFVDTAKSIELKAASRESGSEGPPP 720          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6256.16982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5X9_9PHAE1.500e-23597.36Uroporphyrinogen decarboxylase n=2 Tax=Ectocarpus ... [more]
A0A7S2UYW2_9STRA4.390e-15968.00Uroporphyrinogen decarboxylase n=1 Tax=Fibrocapsa ... [more]
A0A6T5PC14_HETAK6.440e-14664.71Uroporphyrinogen decarboxylase n=1 Tax=Heterosigma... [more]
A0A7S2BY39_9STRA2.350e-14467.50Uroporphyrinogen decarboxylase n=1 Tax=Dictyocha s... [more]
A0A836CKK7_9STRA3.820e-14463.53Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=... [more]
A0A7S0N122_9CRYP4.310e-14362.42Uroporphyrinogen decarboxylase n=1 Tax=Cryptomonas... [more]
W7UA58_9STRA5.030e-14362.80Uroporphyrinogen decarboxylase n=1 Tax=Nannochloro... [more]
L1K3R9_GUITC1.050e-14160.24Uroporphyrinogen decarboxylase n=3 Tax=Guillardia ... [more]
A0A7S2FRM6_9EUKA1.100e-14063.01Uroporphyrinogen decarboxylase n=1 Tax=Haptolina b... [more]
A0A4D9CWJ7_9STRA3.970e-13963.10Uroporphyrinogen decarboxylase n=1 Tax=Nannochloro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6256contigEcto-sp13_S_contig6256:680..3492 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score558.1
Seed ortholog evalue2.8e-156
Seed eggNOG ortholog2880.D7FQS7
Preferred nameUROD3
Model size1032
KEGG rclassRC00872
KEGG koko:K01599
KEGG ReactionR03197,R04972
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
KEGG ModuleM00121
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.uroporphyrinogen decarboxylase activity
EggNOG OGsCOG0407@1,KOG2872@2759
EC4.1.1.37
Cds size1032
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463869.3930643-CDS-Ecto-sp13_S_contig6256:679..10121681463869.3930643-CDS-Ecto-sp13_S_contig6256:679..1012Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6256 680..1012 +
1681463869.4056242-CDS-Ecto-sp13_S_contig6256:1410..16111681463869.4056242-CDS-Ecto-sp13_S_contig6256:1410..1611Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6256 1411..1611 +
1681463869.416505-CDS-Ecto-sp13_S_contig6256:2039..22341681463869.416505-CDS-Ecto-sp13_S_contig6256:2039..2234Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6256 2040..2234 +
1681463869.4275868-CDS-Ecto-sp13_S_contig6256:3189..34921681463869.4275868-CDS-Ecto-sp13_S_contig6256:3189..3492Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6256 3190..3492 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6256.16982.1prot_Ecto-sp13_S_contig6256.16982.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6256 680..3492 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6256.16982.1

>prot_Ecto-sp13_S_contig6256.16982.1 ID=prot_Ecto-sp13_S_contig6256.16982.1|Name=mRNA_Ecto-sp13_S_contig6256.16982.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=344bp
CCAPPSSLSQAGRYMSAFRKYSDKYPFRHRSETPEIAIELSLQPWRTFGV
DGVIMFSDILTPLPSMGVDFDVVKGTGPVISNPIRTKADVEAVRVMEDID
GKLPFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTK
KMMMEDPALFHSLMTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQ
FETFAKPYANLAMSILKQRHPDVPVIYFANGGSSYLESQRDTQADMISLD
QFVNMRSARERLGGSVPVSGNVDPLVLLGPTSGIKEAVRSCVRDAGSSGH
ILNLGHGVLQTTPESSVAALVDSAKEATYASVLDREEAPTPVA*
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mRNA from alignment at Ecto-sp13_S_contig6256:680..3492+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6256.16982.1 ID=mRNA_Ecto-sp13_S_contig6256.16982.1|Name=mRNA_Ecto-sp13_S_contig6256.16982.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6256:680..3492+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGCTGTGCCCCCCCGTCCTCATTATCGCAGGCCGGCCGATACATGAGCGC GTTCCGCAAGTACTCCGACAAGTACCCCTTCCGGCACCGCTCGGAGACCC CGGAGATCGCGATCGAGCTGTCCCTACAGCCGTGGCGAACGTTCGGGGTG GACGGGGTGATCATGTTCTCGGACATCCTCACTCCCCTCCCTTCCATGGG GGTGGACTTCGACGTTGTCAAGGGCACCGGGCCGGTGATCTCGAACCCCA TCAGGACCAAGGCCGACGTGGAGGCGGTTAGGGTGATGGAGGACATCGAC GGGAAGCTGCCGTTCGTGGGGGAGACGCTCAAGGTGTGTGTAGGAATGTG TTTGGATCGTTTGAGGGAGAGGGTACGTGGATCCCCACCGCTAGAGATCC CCTTCATGCAGGCAGGGTACAGCAGTCTCCCGACTGTCTGCCTGTCGAGG ACGATCGATTGCTGGCAGCTTTGGATCATTTGTCCAGCCTCCGTTGTTGT CCACATACCATGACTTAGTGGCGCACTCGGCCGTTATCAAGATGCCGTAG TAAATGGTGCACCCAGTCAAAACACAAATATCGTAGTTGTACTGGTGCAG TCAGTCATTGTCCACACCCTATGACTTAATGGTGCATTCATTCGTTACCC TACCACCACGACTGCATGGTGCACTCATTCGTTACCCAACCACCACTTAA TGGTACACTCCTGCTGGTGTCCAACGGGCAGGCGCTTCGATCGGAGACAG AGGGCAAGTCGACCCTCATCGGATTCGTGGGGGCTCCGTGGACTCTGGCG GCCTACTCCATCGAGGGGGGCAGCAGCAAGCACGCACTCCACACCAAGAA GATGATGATGGAGGACCCGGCTTTGTTCCACTCGCTTATGACTAAGCTCG CAAACAGCATCGGCGACTACGCCTGTTACCAGGTGCGTATGCATGAGGTT TGCAAGTTGGTTAGGCTTTTCGCATGACTTGGGGCGAAGGAGTTGCCGTG AGCGCGGTCGCATGTTGGATGTGGCAACATGACGAGGAGTGTATCACAGC AGCACTTTCGCCGAGGGATAATATTTCCAGATCAAGCGTTGCTATCGTCA TTGTCATCGTCATCGTACGAGCGGGATGGGGCTATCCTGCCGACAAATTG TGTTTGGTACAGATAGTACTACAGAGCAGTATATGCGGCTACGATGTAAG AGCGGGTGTTGCCGAGGCAGCTGAAACTGTCTCAAATCTTGCCTTCTTCT TCCGCCCGTTTTTATGTATTTCGTGTAGTTTATTATGGCCTTGACAAGGC AATTCTGATTTTAATCCCCGTAGATGCGTGCAACTCACTTAATCTTTTTT CGTCGGGCAGGTGGAGAACGGAGCGCAGGTGATCCAGGTCTTTGAGTCCT GGGCGCACCAGATGATCCCGTCACAGTTCGAGACTTTCGCCAAGCCGTAC GCCAACCTCGCCATGTCTATTCTCAAGCAGCGACACCCGGATGTGCCCGT GATCTACTTCGCAAACGGCGGCAGCAGCTATCTCGAGAGCCAGCGAGACA CCCAGGTAGGACATAGGGATAGCTGTTGGAGAGGAACAATCCCGATGCCT GCAGGCAAACATGTTGCCACGTTGTCTCAAACGAACATCCCATTTTTTGT TTGTTTCTCTTGATTGAATCAAAATACAAGATCACAATTTGTCTACTTGG TCAACTTGGAGTGAGGTCTTGCTTAATGTAAGCGCTGCACCAGGTTGTAG ACACTTGGGGCACATGACATTTTTGGTACGAGGCAAGGCCGTGGGTATGG CGTGCACATGGTGATTTGACGTCTAGCCCTGTTCCTCACCACCTTCTTAC GCGTACCAGTACTTGTTCACTTGGACGACCGGTTTGGCGAGGTCCCTGCT TCAAGTTTTTATACTCTTTCCAAGTGCCGTCGCTCTACCAGGCTGACGTG ACGTCATCAGCAACGACCAGCCCGCGTTCCTTTACCATAGGTGGCAACGG ATGTCACACCCCCTGGAGGGATATTTTATTGAAAGCTCGATTTCTCCACA GCAGAAAGAGTTGCGGTGCCGAAAACGGCGGCGCTGGAGAGCCTTGTCGT CGAGGGCTTTCCGACAACGCATCGTTCGATGTGCAAGTTACGAGTAATCG AGCTTTCAAAATCGGTCCAGTCCAGTGGGTGCGGTATCTCGTGTCGCGTA CGGTACAAGACGCATGAGAGCGTGCAGCACATCGTCACTGAAAAAACTCA GAACTCGAAAACAAGACTAAACCAAAGCCAATTGATGAGAGCCCGACACC GGTGTGTCACCCTCACCCCCCCCCCCCCCCCCCCCCCCACCACCCACCCC CACCCCCGACACAACCACCAACACAACACAACCCAGCTCACCCCAGCGGC NNNNNNNNNNAAAAAAAACAAAACCCAAAAAAAAAACTAAACCAAAGCCA ATTGGGGAGAGCCCCACCCCCGGGGGTTCCCCCCCCCCCCCCCCCCCCCC CAAACAACAGGCGGATATGATCAGCCTTGACCAGTTCGTCAACATGCGGT CCGCCAGGGAGCGCCTTGGCGGCAGCGTCCCGGTGTCCGGCAATGTCGAT CCCCTCGTCCTCTTGGGCCCAACGAGCGGCATCAAGGAGGCCGTGAGGTC TTGCGTGAGAGATGCCGGGTCTAGCGGCCACATTCTCAACCTCGGGCATG GAGTGTTGCAGACAACCCCGGAGAGCTCGGTCGCGGCGTTGGTAGACTCG GCAAAGGAGGCCACTTACGCTTCGGTGTTGGATAGGGAGGAGGCGCCTAC GCCGGTAGCGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6256:680..3492+

>mRNA_Ecto-sp13_S_contig6256.16982.1 ID=mRNA_Ecto-sp13_S_contig6256.16982.1|Name=mRNA_Ecto-sp13_S_contig6256.16982.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1032bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6256:680..3492+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGCTGTGCCCCCCCGTCCTCATTATCGCAGGCCGGCCGATACATGAGCGC
GTTCCGCAAGTACTCCGACAAGTACCCCTTCCGGCACCGCTCGGAGACCC
CGGAGATCGCGATCGAGCTGTCCCTACAGCCGTGGCGAACGTTCGGGGTG
GACGGGGTGATCATGTTCTCGGACATCCTCACTCCCCTCCCTTCCATGGG
GGTGGACTTCGACGTTGTCAAGGGCACCGGGCCGGTGATCTCGAACCCCA
TCAGGACCAAGGCCGACGTGGAGGCGGTTAGGGTGATGGAGGACATCGAC
GGGAAGCTGCCGTTCGTGGGGGAGACGCTCAAGGCGCTTCGATCGGAGAC
AGAGGGCAAGTCGACCCTCATCGGATTCGTGGGGGCTCCGTGGACTCTGG
CGGCCTACTCCATCGAGGGGGGCAGCAGCAAGCACGCACTCCACACCAAG
AAGATGATGATGGAGGACCCGGCTTTGTTCCACTCGCTTATGACTAAGCT
CGCAAACAGCATCGGCGACTACGCCTGTTACCAGGTGGAGAACGGAGCGC
AGGTGATCCAGGTCTTTGAGTCCTGGGCGCACCAGATGATCCCGTCACAG
TTCGAGACTTTCGCCAAGCCGTACGCCAACCTCGCCATGTCTATTCTCAA
GCAGCGACACCCGGATGTGCCCGTGATCTACTTCGCAAACGGCGGCAGCA
GCTATCTCGAGAGCCAGCGAGACACCCAGGCGGATATGATCAGCCTTGAC
CAGTTCGTCAACATGCGGTCCGCCAGGGAGCGCCTTGGCGGCAGCGTCCC
GGTGTCCGGCAATGTCGATCCCCTCGTCCTCTTGGGCCCAACGAGCGGCA
TCAAGGAGGCCGTGAGGTCTTGCGTGAGAGATGCCGGGTCTAGCGGCCAC
ATTCTCAACCTCGGGCATGGAGTGTTGCAGACAACCCCGGAGAGCTCGGT
CGCGGCGTTGGTAGACTCGGCAAAGGAGGCCACTTACGCTTCGGTGTTGG
ATAGGGAGGAGGCGCCTACGCCGGTAGCGTGA
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