mRNA_Ecto-sp13_S_contig62264.16952.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig62264.16952.1 vs. uniprot
Match: D8LGL6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGL6_ECTSI) HSP 1 Score: 115 bits (289), Expect = 5.750e-32 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query: 22 QLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLS 180
QLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLS
Sbjct: 30 QLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLS 82
BLAST of mRNA_Ecto-sp13_S_contig62264.16952.1 vs. uniprot
Match: A0A6U3R2X0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3R2X0_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.430e-16 Identity = 34/53 (64.15%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 1 RTACSSTQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGM 159
RT L E HEL+WDDGVA ET IDFDAPH+S SE FAWW GG FF G+
Sbjct: 49 RTLAPQGSLHEEHELVWDDGVAAETCIDFDAPHISSSEGFAWWIGGFLFFLGV 101
BLAST of mRNA_Ecto-sp13_S_contig62264.16952.1 vs. uniprot
Match: A0A7S2P129_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P129_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 7.890e-16 Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 1 RTACSSTQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGM 159
R +T+L E+HEL+WDDGVAPE TIDFD+ H+S E AWW GGL FF G+
Sbjct: 39 RNLAPTTKLVEDHELVWDDGVAPELTIDFDSQHISTGEGLAWWLGGLGFFTGL 91
BLAST of mRNA_Ecto-sp13_S_contig62264.16952.1 vs. uniprot
Match: A0A7S2C717_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C717_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.980e-15 Identity = 34/60 (56.67%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 1 RTACSSTQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLS 180
RT L E HELIWDDGVA ETT+DFDAPH+S E AWW GG FF G+ T++
Sbjct: 50 RTLVPEGPLHEEHELIWDDGVAAETTLDFDAPHISKWEGLAWWFGGFGFFFGVYTFATVT 109
BLAST of mRNA_Ecto-sp13_S_contig62264.16952.1 vs. uniprot
Match: K8YRF0_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRF0_NANGC) HSP 1 Score: 70.1 bits (170), Expect = 9.230e-14 Identity = 35/60 (58.33%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 1 RTACSSTQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLS 180
RTA L E HELIWDD VA E IDFDA + EAF WW GG FF G+LGLV L+
Sbjct: 50 RTAMPEGPLYEEHELIWDDRVAAEMCIDFDASFVPTREAFRWWLGGFGFFFGLLGLVALT 109
BLAST of mRNA_Ecto-sp13_S_contig62264.16952.1 vs. uniprot
Match: A0A835ZFI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI9_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 4.080e-13 Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 22 QLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLS 180
+L E EL+WDD VAPE +DFDAPH+S ++ WW GGL FFA + +V LS
Sbjct: 43 RLHEEQELMWDDSVAPELCLDFDAPHISRTQGLLWWLGGLGFFAAVFNIVKLS 95
BLAST of mRNA_Ecto-sp13_S_contig62264.16952.1 vs. uniprot
Match: A0A4D9D035_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D035_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 6.490e-13 Identity = 32/52 (61.54%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 25 LDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLS 180
L E HELIWDD VA E IDFDA + EAF WW GG FF G+LGLV L+
Sbjct: 6 LYEEHELIWDDRVAAEMCIDFDASFVPTREAFRWWLGGFGFFFGLLGLVALT 57
BLAST of mRNA_Ecto-sp13_S_contig62264.16952.1 vs. uniprot
Match: A0A7S1FZR7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZR7_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.350e-12 Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 1 RTACSSTQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLS 180
R +L E+HEL+WDDGVAPE TIDFD PH S + A W GG+ FF + +V L+
Sbjct: 53 RNLAPQEKLHESHELMWDDGVAPELTIDFDVPHYSGEKGLAMWLGGIAFFVTLYQVVKLT 112
BLAST of mRNA_Ecto-sp13_S_contig62264.16952.1 vs. uniprot
Match: A0A7S2XQC7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQC7_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 2.810e-12 Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 16 STQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGM 159
S +L ENH+ +WDDGVAPE +DFD H+S +E AWW GG FF G+
Sbjct: 79 SEKLVENHDCVWDDGVAPELALDFDCQHVSSTEGLAWWLGGFGFFIGV 126
BLAST of mRNA_Ecto-sp13_S_contig62264.16952.1 vs. uniprot
Match: A0A7R9ZHV7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZHV7_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 8.580e-12 Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 1 RTACSSTQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFF 150
R + +L EN++ +WDDGVAPET +DFD H+S E AWW GGL FF
Sbjct: 61 RIPAPTEKLVENNDAVWDDGVAPETALDFDCQHISSEEGLAWWLGGLGFF 110 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62264.16952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig62264.16952.1 >prot_Ecto-sp13_S_contig62264.16952.1 ID=prot_Ecto-sp13_S_contig62264.16952.1|Name=mRNA_Ecto-sp13_S_contig62264.16952.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp RTACSSTQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFback to top mRNA from alignment at Ecto-sp13_S_contig62264:3..182- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig62264.16952.1 ID=mRNA_Ecto-sp13_S_contig62264.16952.1|Name=mRNA_Ecto-sp13_S_contig62264.16952.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=180bp|location=Sequence derived from alignment at Ecto-sp13_S_contig62264:3..182- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig62264:3..182- >mRNA_Ecto-sp13_S_contig62264.16952.1 ID=mRNA_Ecto-sp13_S_contig62264.16952.1|Name=mRNA_Ecto-sp13_S_contig62264.16952.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=180bp|location=Sequence derived from alignment at Ecto-sp13_S_contig62264:3..182- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |