prot_Ecto-sp13_S_contig6226.16951.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6226.16951.1
Unique Nameprot_Ecto-sp13_S_contig6226.16951.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length159
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6226.16951.1 vs. uniprot
Match: D8LSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ7_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 5.250e-87
Identity = 138/158 (87.34%), Postives = 138/158 (87.34%), Query Frame = 0 
Query:    1 MKELAPEDYQMNGPKLLSKGDTASAPNGARPNGSSSASSPSVTTRRRRPQQISSYSWEDYGEEVRLTFRQSEWEWAKVDAEEIEIEWGSRRFRMSIDSREYGLHTIDLQRLSGDVVGVRARKLKTRLVVALVKGGRRGSYSHRPAWSKLQAALEKPSD 158
            MKELAPEDYQMNGPKLLSKGDT SAPNGARPNGS              PQQISSYSWEDYGEEVRLTFRQSEWEWAKVD EEIEIEWGSRRFRMSIDSREYGLHTIDLQRLSG V GV ARKLKTRLVVALVKGGRRGSYSH PAWSKLQAALEKPSD
Sbjct:  113 MKELAPEDYQMNGPKLLSKGDTTSAPNGARPNGSXXXXXXXXXXXXXXPQQISSYSWEDYGEEVRLTFRQSEWEWAKVDVEEIEIEWGSRRFRMSIDSREYGLHTIDLQRLSGVVAGVTARKLKTRLVVALVKGGRRGSYSHSPAWSKLQAALEKPSD 270
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6226.16951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSJ7_ECTSI5.250e-8787.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 49..155
e-value: 1.4E-5
score: 27.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6226contigEcto-sp13_S_contig6226:5577..7618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6226.16951.1mRNA_Ecto-sp13_S_contig6226.16951.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6226 4942..8438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6226.16951.1 ID=prot_Ecto-sp13_S_contig6226.16951.1|Name=mRNA_Ecto-sp13_S_contig6226.16951.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=159bp
MKELAPEDYQMNGPKLLSKGDTASAPNGARPNGSSSASSPSVTTRRRRPQ
QISSYSWEDYGEEVRLTFRQSEWEWAKVDAEEIEIEWGSRRFRMSIDSRE
YGLHTIDLQRLSGDVVGVRARKLKTRLVVALVKGGRRGSYSHRPAWSKLQ
AALEKPSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone