prot_Ecto-sp13_S_contig622.16945.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig622.16945.1
Unique Nameprot_Ecto-sp13_S_contig622.16945.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length249
Homology
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BLAST of mRNA_Ecto-sp13_S_contig622.16945.1 vs. uniprot
Match: A0A6H5KKD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD6_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 4.270e-40
Identity = 128/172 (74.42%), Postives = 130/172 (75.58%), Query Frame = 0 
Query:   66 DRRATPAGGSNGVAPASYPAAAVPTAPTA-VASGGGEEASGIAVAATDRGAVNSLPHSHHAAXXXXXXXXXVGQDPAPASQPTPQQQWAAVLHLPPSALSTPAPPLPXXXXXTAPASEDVPXXXXXXXXXADSQPQAPTQXXXXXXXXWWVQQXXXXLQLQLQRHMIYQQSL 236
            DR      GSNGVAPASYPAAAV TA  A VA GGGEEA+GIAV A DR A +SLP S  AA XXXXXXX V   PAPASQPTPQQQWAAVLHLPPSALSTPAPPLP     TAP  EDVPXXXXXXXXX  SQ  A   XXXX    WWVQQ XXXLQLQLQRHMIYQQSL
Sbjct: 3327 DRXXXXXXGSNGVAPASYPAAAVSTATAASVAYGGGEEATGIAVTAADRTAADSLPLSQDAAAXXXXXXXRV---PAPASQPTPQQQWAAVLHLPPSALSTPAPPLPPVAPATAPVPEDVPXXXXXXXXXXXSQXXAXXXXXXXAQQSWWVQQHXXXLQLQLQRHMIYQQSL 3495
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig622.16945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKD6_9PHAE4.270e-4074.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig622contigEcto-sp13_S_contig622:1195..2370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig622.16945.1mRNA_Ecto-sp13_S_contig622.16945.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig622 1193..2370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig622.16945.1 ID=prot_Ecto-sp13_S_contig622.16945.1|Name=mRNA_Ecto-sp13_S_contig622.16945.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=249bp
PTTASHPSPTPVAPSTVAAAAAAAAAAATGRPTGSAAGSSGASSWPASSP
PVPAGAAGGEQRRSADRRATPAGGSNGVAPASYPAAAVPTAPTAVASGGG
EEASGIAVAATDRGAVNSLPHSHHAAAATAEAAAAVGQDPAPASQPTPQQ
QWAAVLHLPPSALSTPAPPLPPAAPATAPASEDVPPPPPPRPQRADSQPQ
APTQQQQTAQQSWWVQQHQQQLQLQLQRHMIYQQSLQQHALAQQQQQQQ
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