prot_Ecto-sp13_S_contig6217.16940.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6217.16940.1
Unique Nameprot_Ecto-sp13_S_contig6217.16940.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length55
Homology
BLAST of mRNA_Ecto-sp13_S_contig6217.16940.1 vs. uniprot
Match: D7G5G0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G0_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.180e-25
Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    1 MANMFKCLGAEDDTVAKGVLEGKVKCLVELLVSKLAANPSSKFFVGDAPTIADLQ 55
            +ANMFKC+GAEDDTVAKGVLEGKVK LVELLVSKLAANPSSKFFVG +PTIADLQ
Sbjct:   98 LANMFKCMGAEDDTVAKGVLEGKVKGLVELLVSKLAANPSSKFFVGTSPTIADLQ 152          
BLAST of mRNA_Ecto-sp13_S_contig6217.16940.1 vs. uniprot
Match: D7G537_ECTSI (Glutathione S-transferase n=4 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G537_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.690e-22
Identity = 45/55 (81.82%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    1 MANMFKCLGAEDDTVAKGVLEGKVKCLVELLVSKLAANPSSKFFVGDAPTIADLQ 55
            MANMFKC+G EDDTVAK VLEGK+K LV +LV+KLAANPSSKFFVG++PTIADLQ
Sbjct:   98 MANMFKCMGQEDDTVAKEVLEGKIKTLVGMLVAKLAANPSSKFFVGNSPTIADLQ 152          
BLAST of mRNA_Ecto-sp13_S_contig6217.16940.1 vs. uniprot
Match: A0A6H5JNS9_9PHAE (GST C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS9_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.220e-19
Identity = 41/55 (74.55%), Postives = 49/55 (89.09%), Query Frame = 0
Query:    1 MANMFKCLGAEDDTVAKGVLEGKVKCLVELLVSKLAANPSSKFFVGDAPTIADLQ 55
            + NMFKC+G  DDTVAKGVLEGK+K LVE+LV+KLA N SSKFFVG++PTIA+LQ
Sbjct:  140 LTNMFKCMGQTDDTVAKGVLEGKIKTLVEMLVAKLATNQSSKFFVGNSPTIANLQ 194          
BLAST of mRNA_Ecto-sp13_S_contig6217.16940.1 vs. uniprot
Match: D7G5G1_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G1_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 1.160e-18
Identity = 40/55 (72.73%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    1 MANMFKCLGAEDDTVAKGVLEGKVKCLVELLVSKLAANPSSKFFVGDAPTIADLQ 55
            MANMFKC+  +DDT+A G+LEGK+K LVE+L S+LAAN SSKFFVG  PTIADLQ
Sbjct:   98 MANMFKCVDQKDDTMANGLLEGKIKTLVEMLTSRLAANASSKFFVGHPPTIADLQ 152          
BLAST of mRNA_Ecto-sp13_S_contig6217.16940.1 vs. uniprot
Match: A0A6H5JE39_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE39_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 3.710e-17
Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    1 MANMFKCLGAEDDTVAKGVLEGKVKCLVELLVSKLAANPSSKFFVGDAPTIADLQ 55
            + NM KC G +DDTVAKGVL GK+K LV++LV+KLAANPSS FFVG++P IADLQ
Sbjct:  347 LTNMSKCTGQKDDTVAKGVLVGKIKTLVDMLVAKLAANPSSMFFVGNSPNIADLQ 401          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6217.16940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G5G0_ECTSI1.180e-2590.91Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
D7G537_ECTSI1.690e-2281.82Glutathione S-transferase n=4 Tax=Ectocarpus silic... [more]
A0A6H5JNS9_9PHAE1.220e-1974.55GST C-terminal domain-containing protein n=1 Tax=E... [more]
D7G5G1_ECTSI1.160e-1872.73Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
A0A6H5JE39_9PHAE3.710e-1770.91DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6217contigEcto-sp13_S_contig6217:6313..6966 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6217.16940.1mRNA_Ecto-sp13_S_contig6217.16940.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6217 6313..6968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6217.16940.1 ID=prot_Ecto-sp13_S_contig6217.16940.1|Name=mRNA_Ecto-sp13_S_contig6217.16940.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=55bp
MANMFKCLGAEDDTVAKGVLEGKVKCLVELLVSKLAANPSSKFFVGDAPT
IADLQ
back to top