mRNA_Ecto-sp13_S_contig6207.16928.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6207.16928.1 vs. uniprot
Match: A0A6H5JS37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS37_9PHAE) HSP 1 Score: 1102 bits (2849), Expect = 0.000e+0 Identity = 542/582 (93.13%), Postives = 556/582 (95.53%), Query Frame = 3
Query: 135 MLEDGGGHRRPTRSSAPQPYRCDGDHAEALCSKLDDDYAIPTVTGAHRTEQGEVTGGGDTASAGMRREAFPSGARQEDVRLSVPPHYIWWACKGTRRSSPGDEGDAGDTAWVDCDGYYAFGRQEVNPTCRSEPDEKGSDWFGLLSANTPENSEFIQPGRVEGLPHPRNLELLEADRGQSFEEVSSSSSGGVPAAQGAAXXXXXXXXXXGAANQLVNAPADSECDELWRTWPAMQESAIANGTVVVFDLVSRVGNAFMDLRNVIQVARWLELGLVVNWKGFQGFRDAFDTGELKWDIDTEPFRRKAKEISRGVNPSGFHLFRFYDGFMVLCDHQLTMLASKMGIAIQHPDAMVLQLKKVFPVKIRYWISGGLQNGLPASQPCTWNMFVKRSPSMMRSLEVYNPWRAEGSSMSRFQKYIAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFAATEEAKGTCPAAFSADEGDVPLFISSNSMSMARNCSAAAAGRKMLPGLVDVGVPVGDAHTTFSAHPKIAALKAFADFLYILDAEVVVRTASSFSGTAVEMKGMNCFEAKVSVEMPISGLYVCVPAGC 1880
MLEDG GHRRPTR SAPQPYRCDGDHAEALCSK+D DY+IPTVTGAHRTEQG VTGGGDTASAG REAFPS RQEDVRLSVPP YIWWACKGTRRSSPGD GD GD AWVDCDGYYAFGR+EVNPTCRSEPDEKGSDWFGLLSAN PEN EFI PGRVEGLP+PRNLELLEADRGQSFEEVSSSSSGGVPAAQG AXXXXXXXXXX NQLV+APADSECDELWRTWPAMQESAIANGTVVVFDLVSRVGNAFMDLRN+IQVARWLELGLV+NWKGFQGFRDAFDTGELKWDIDTEPFRR+AKEISRGVNPSGFHLFRFYDGFMVLCDHQLTMLASK+GIAIQHPDAM+LQLKKVFPVKIRYWISGGLQNGLPASQPCTWNMFV+RS +MMR LE YNPWR EGSSMSRFQKYIAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFAATEEAKG CPAAF+ADEGDVPLFISSNSMSMARNCSA AAGRKMLPGLVDVGVPVGDAHTTFSAHPKIAALKAF DFL+ILDAEVVVRTASSFSGTAVEMKGMNCFEAKVSVEMPISGLYVCVPAGC
Sbjct: 1 MLEDGPGHRRPTRPSAPQPYRCDGDHAEALCSKIDSDYSIPTVTGAHRTEQGGVTGGGDTASAGTLREAFPSETRQEDVRLSVPPQYIWWACKGTRRSSPGDVGDVGDAAWVDCDGYYAFGRREVNPTCRSEPDEKGSDWFGLLSANNPENPEFIPPGRVEGLPNPRNLELLEADRGQSFEEVSSSSSGGVPAAQGTAXXXXXXXXXXXXXNQLVHAPADSECDELWRTWPAMQESAIANGTVVVFDLVSRVGNAFMDLRNIIQVARWLELGLVINWKGFQGFRDAFDTGELKWDIDTEPFRRRAKEISRGVNPSGFHLFRFYDGFMVLCDHQLTMLASKVGIAIQHPDAMMLQLKKVFPVKIRYWISGGLQNGLPASQPCTWNMFVRRSAAMMRRLEAYNPWRVEGSSMSRFQKYIAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFAATEEAKGACPAAFNADEGDVPLFISSNSMSMARNCSAEAAGRKMLPGLVDVGVPVGDAHTTFSAHPKIAALKAFVDFLFILDAEVVVRTASSFSGTAVEMKGMNCFEAKVSVEMPISGLYVCVPAGC 582
BLAST of mRNA_Ecto-sp13_S_contig6207.16928.1 vs. uniprot
Match: D8LBV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV4_ECTSI) HSP 1 Score: 902 bits (2332), Expect = 0.000e+0 Identity = 447/492 (90.85%), Postives = 459/492 (93.29%), Query Frame = 3
Query: 135 MLEDGGGHRRPTRSSAPQPYRCDGDHAEALCSKLDDDYAIPTVTGAHRTEQGEVTGGGDTASAGMRREAFPSGARQEDVRLSVPPHYIWWACKGTRRSSPGDEGDAGDTAWVDCDGYYAFGRQEVNPTCRSEPDEKGSDWFGLLSANTPENSEFIQPGRVEGLPHPRNLELLEADRGQSFEEVSSSSSGGVPAAQGAAXXXXXXXXXXGAANQLVNAPADSECDELWRTWPAMQESAIANGTVVVFDLVSRVGNAFMDLRNVIQVARWLELGLVVNWKGFQGFRDAFDTGELKWDIDTEPFRRKAKEISRGVNPSGFHLFRFYDGFMVLCDHQLTMLASKMGIAIQHPDAMVLQLKKVFPVKIRYWISGGLQNGLPASQPCTWNMFVKRSPSMMRSLEVYNPWRAEGSSMSRFQKYIAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFAATEEAKGTCPAAFSADEGDVPLFISSNSMSMARN-CS 1607
MLEDG GHRRPTR SAPQPYRCDGDHAEALCSKL DD +IPTVTGAHRTE G VTG GDTASAG RE FPSG RQEDVRLSVPP +IWWACKGTRRSS GD GD GD AWVDCDGYYAFGRQEVNPTCRSEPDEKGS+WFGLLSAN PEN EFIQ GRVEGLP+PRNLELLEADRGQSFEEVSSSSSGGVP AQGAAXXXXXXXXXX NQLV+APADSECDELWRTWPAMQESAIANGTVVVFDLVSRVGNAFMDLRN+IQVARWLELGLVVNWKGFQGFRDAFDTGELKWDIDTEPFRR+AK ISRGVNPSGFHLF FYDGFMVLCDHQLTMLASKMGIAIQHPDAMVLQLKKVFPVKIRYWISG LQNGLPASQPCTWNMFVKRS SMMRSLEVYNPWR EGSSMSRFQKY+AFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYF ATEEAKG CPAAF+ADEGDVPLFISSNS+ + R+ CS
Sbjct: 1 MLEDGEGHRRPTRPSAPQPYRCDGDHAEALCSKLHDDCSIPTVTGAHRTEHGGVTGCGDTASAGTLREVFPSGTRQEDVRLSVPPQHIWWACKGTRRSSAGDVGDVGDAAWVDCDGYYAFGRQEVNPTCRSEPDEKGSEWFGLLSANNPENPEFIQSGRVEGLPNPRNLELLEADRGQSFEEVSSSSSGGVPVAQGAAXXXXXXXXXXXXXNQLVHAPADSECDELWRTWPAMQESAIANGTVVVFDLVSRVGNAFMDLRNIIQVARWLELGLVVNWKGFQGFRDAFDTGELKWDIDTEPFRRRAKAISRGVNPSGFHLFWFYDGFMVLCDHQLTMLASKMGIAIQHPDAMVLQLKKVFPVKIRYWISGRLQNGLPASQPCTWNMFVKRSASMMRSLEVYNPWRVEGSSMSRFQKYVAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFTATEEAKGVCPAAFNADEGDVPLFISSNSIVLLRHSCS 492
BLAST of mRNA_Ecto-sp13_S_contig6207.16928.1 vs. uniprot
Match: A0A6H5JA60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA60_9PHAE) HSP 1 Score: 329 bits (843), Expect = 2.570e-98 Identity = 206/596 (34.56%), Postives = 301/596 (50.50%), Query Frame = 3
Query: 111 TARHPICRMLEDGGGHRRPTRSSAPQPYRC-DGDHAEALCSKLDDDYAIPTVTGAHRTEQGEVTGGGDTASAGMRREAFPSGARQEDVRLSVPPHYIWWACKGTRRSSPGDEGDAGDTAWVDCDGYYAFGRQEVNPTCRSEPDEKGSDWFGLLSANTPENSEFIQPGRVEGLPHPRNLELLEADRGQSFEEVSSSSSGGVPAAQGAAXXXXXXXXXXGAANQLVNAPADSECDELWRTWPAMQESAIANGTVVVFDLVSRVGNAFMDLRNVIQVARWLELGLVVNWKGFQGFRDAFDTGELKWDIDTEPFRRKAKEISRGVNPSGFHLFRFYDGFMVLCDHQLTMLASKMGIAIQHPDAMVLQLKKVFPVKIRYWISGGLQNGLPAS-----QPCTWNMFVKRSPSMMRSLEVYNPWRAEGSSMSRFQKYIAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFAATEEAKGTCPAAFSADEGDVPLFISSNSMSMARNCSAAAAGRKMLPGLVDVGVPVGDAHTTFSAHPKIAALKAFADFLYILDAEVVVRTASSFSGTAVEMKGMNCFEAKVSVEMPISGLYVCVPAGC 1880
T HP C +LE G RP + P Y C G++ +CS D + RT + +++ +R E D S WWA +G R + D D W+DC+GYYAFG E D S + A E + + +V+ L + L + + +E + + ++ V+ D +C LW +WPA+QE+AIANGTV+VFD+ VGN F+ L N+I+ AR LE+ L + W F GFR AFDT +KWD+D +KA+E++ G + +F DG +VL QL LA + GI PD + ++ VK R+ L + S + C WNM ++RSPSM+ SLE +NPW G R + Y+A+ +RT++GE+ SF+P +HTYI + ST V + +AT+ A+ CP F D +P++ISSNS SMARNC+A AA + G VD+G+ DAHTTFS +P AL AF D+LY++D+ V+++T SSFS T +K + C E + E+P+ L VC+P C
Sbjct: 19 TGIHPFCWILE---GVDRPQTARLPAWYGCRGGENDTVVCSSADRLHE-------QRTSLSDEDWVPRSSTNNLRHET--------DRTTSS----TWWAFEGQRETRGNDSNGVKDPGWIDCNGYYAFG---------GEADSDKSYRGNMRRALEDEEASSTEL-QVKPLAKKNDSTELGSSVDVALQEETEKGN-----------------------DRFVHTTGD-DCHPLWTSWPAVQEAAIANGTVLVFDIFPSVGNLFITLGNLIKTARLLEVALFLKWDKFPGFRAAFDTASIKWDLDPTTVVQKAEELTLGAEVDRLYPLKFSDGNLVLSSQQLEALAIQTGI----PDTSLAEM--AVAVKERWSSLRRLSQAIAGSAVVPPETCAWNMLLRRSPSMIASLEAHNPWTPSGFG-PRPKDYVAWHVRTSDGESEHSFNPDVHTYILHGQSSTTVVPIFLSATDAAEKMCPKMFHEDAPKMPVYISSNSKSMARNCTALAAEHDVTAGFVDLGIDDLDAHTTFSKNPNATALNAFIDYLYLMDSSVIIQTGSSFSSTVARVKSLKCREVEHPPELPVKRLNVCLPHDC 551
BLAST of mRNA_Ecto-sp13_S_contig6207.16928.1 vs. uniprot
Match: A0A6H5L1Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z7_9PHAE) HSP 1 Score: 311 bits (798), Expect = 3.900e-94 Identity = 165/375 (44.00%), Postives = 230/375 (61.33%), Query Frame = 3
Query: 792 DSECDELWRTWPAMQESAIANGTVVVFDLVSRVGNAFMDLRNVIQVARWLELGLVVNWKGFQGFRDAFDTGELKWDIDTEPFRRKAKEISRGVNPSGFHLFRFYDGFMVLCDHQLTMLASKMGIAIQHPDAMVLQLKKVFPVKIRYWISGGL--------QNGLPASQPCTWNMFVKRSPSMMRSLEVYNPWRAEGSSMSRFQKYIAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFAATEEAKGTCPAAFSADEGDVPLFISSNSMSMARNCSAAAAG----RKMLPGLVDVGVPVGDAHTTFSAHPKIAALKAFADFLYILDAEVVVRTASSFSGTAVEMKGMNCFEAKVSVEMPISGLYVCVPAGC 1880
D +CD W +WP++QE+A+A GTVVVF++ VGN F+ L N+I+ AR LE+ L++NW+ F+GFR+AFD +KWD+D ++A S+G + F F DG MVL QL +A K+G+ D M L++ + KI GGL QN + PC WNM ++RSP+MM SLE +NPW + R +KY+A+ IRT+ GET GSF P +HTYIF+ ST V + +AT+ A+ CP F D P++ISSNS +MARNC+ AA K+ PG VD+G+ DAHTTFS +PK AL AF D+LY++D+ ++V+T SSFS T +KGM+C +P+ L VC+PA C
Sbjct: 5 DDDCDSTWSSWPSVQEAAVARGTVVVFNVFPSVGNMFVILHNIIKTARLLEVALLLNWQRFEGFREAFDPASIKWDLDQPTLVQQAAPRSQGAEAERLYPFTFPDGQMVLSHWQLETIARKVGLPGTSVDEMAAALEEGYS-KI-----GGLGRLSRETVQNERFSVLPCAWNMLLRRSPAMMASLEAHNPWMTHEFN-PRPKKYVAWHIRTSHGETNGSFTPHVHTYIFHRQSSTSVLPIFLSATDAAERMCPRFFDQDVPITPVYISSNSKTMARNCTVLAATLAAEHKVGPGFVDLGIDDVDAHTTFSKNPKATALNAFIDYLYLMDSSIIVQTGSSFSFTVASIKGMSCHGVAKPEGLPVKNLNVCLPADC 372
BLAST of mRNA_Ecto-sp13_S_contig6207.16928.1 vs. uniprot
Match: A0A6H5KDJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ4_9PHAE) HSP 1 Score: 250 bits (638), Expect = 4.950e-72 Identity = 128/316 (40.51%), Postives = 193/316 (61.08%), Query Frame = 3
Query: 939 LELGLVVNWKGFQGFRDAFDTGELKWDIDTEPFRRKAKEISRGVNPSGFHLFRFYDGFMVLCDHQLTMLASKMGIAIQHPDAMVLQLKKVFPVKIRYWISGGLQNGLPASQPCTWNMFVKRSPSMMRSLEVYNPWRAEGSSMSRFQKYIAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFAATEEAKGTCPAAFSADEGDVPLFISSNSMSMARNCSAAAAGRKMLPGLVDVGVPVGDAHTTFSAHPKIAALKAFADFLYILDAEVVVRTASSFSGTAVEMKGMNCFEAKVSVEMPI--SGLYVCVPAGC 1880
LE+ L++N F FR AF+ +KWD+DTEPF+ + EIS+GV+ H +F DGF+++ DHQL ++++ G+ + +K F + R++++ L + PC WNM ++RSP+MM S+E + PW G S Y A+ IRT+EGET SF + YIFNN+ S +C + + E ++ CP+ FS + D P++ISSNS S ARNCSA A + + VD+G+ DAHT FS +P + AF DFLY++DA+++VRTASSFSG +++K C +A + ++P+ L+VCVPA C
Sbjct: 2 LEVALIINLDQFPAFRVAFEPEVIKWDLDTEPFKLRGGEISKGVDAEDRHALQFLDGFLIVSDHQLEVMSASFGVGSGTHSGIKAGFRKAFKNRWRHYLATA---NLDLAPPCAWNMVLRRSPTMMNSMEAHTPWVTAGDSPRAHAHYHAWHIRTSEGETERSFSKQ--RYIFNNVASQSICPMFVSTREASEEACPSRFSGN--DSPVYISSNSKSTARNCSAEARKKDIETAFVDLGINAQDAHTAFSKNPD-TVVNAFIDFLYLMDADIIVRTASSFSGAIIDIKSYRCMDAYLG-KLPVFRMHLFVCVPADC 308
BLAST of mRNA_Ecto-sp13_S_contig6207.16928.1 vs. uniprot
Match: A0A6H5JUR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUR5_9PHAE) HSP 1 Score: 182 bits (463), Expect = 6.800e-49 Identity = 90/212 (42.45%), Postives = 132/212 (62.26%), Query Frame = 3
Query: 1245 LQNGLPASQPCTWNMFVKRSPSMMRSLEVYNPWRAEGSSMSRFQKYIAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFAATEEAKGTCPAAFSADEGDVPLFISSNSMSMARNCSAAAAGRKMLPGLVDVGVPVGDAHTTFSAHPKIAALKAFADFLYILDAEVVVRTASSFSGTAVEMKGMNCFEAKVSVEMPISGLYVCVPAGC 1880
++N + Q C WNM ++RS S+M SL+ NPW G SR +Y+A+ IRT+ GET SF P +H YIFN S V + +AT A+ CP + + +P++ISSNS +M+RNC+A AA K+ G VD+G+ DAHT +SA+P AL AF D+LY++D+ ++V+T SSF+ T +KG +C A + P+ LY+C+P C
Sbjct: 9 VRNSPDSLQACAWNMLLRRSHSIMASLDANNPWTPAGFG-SRPAEYVAWHIRTSNGETKESFSPDVHQYIFNGQTSAAVFPLFLSATSFAEKACPKLYHDNIPIMPVYISSNSKTMSRNCTALAAENKIQSGFVDLGIADSDAHTGYSANPDATALNAFIDYLYLMDSSIIVQTGSSFAFTVASIKGTSCRGAPKTKGAPVRSLYICLPNDC 219
BLAST of mRNA_Ecto-sp13_S_contig6207.16928.1 vs. uniprot
Match: D7G5J4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J4_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 2.710e-18 Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 3
Query: 1200 KKVFPVKIRYWISGGLQNGLPASQPCTWNMFVKRSPSMMRSLEVYNPWRAEGSSMSRFQKYIAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFAATEEAKGTCPAAFSADEGDVPLFISSN 1580
+K F + R++ + L + PC WNM ++RSP+MM S+E + PW G S Y A+ IRT+EGET SF + YIFNN+ S +C + + E ++ CP+ FS D P++ISSN
Sbjct: 20 RKAFKNRWRHYFA---MANLDLAPPCAWNMVLRRSPTMMNSMEAHTPWVTVGDSPRTRAHYHAWHIRTSEGETERSFSKQ--RYIFNNVASESICPMFVSTREASEEACPSRFSGK--DSPVYISSN 139 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6207.16928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6207.16928.1 >prot_Ecto-sp13_S_contig6207.16928.1 ID=prot_Ecto-sp13_S_contig6207.16928.1|Name=mRNA_Ecto-sp13_S_contig6207.16928.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=618bp MPPLPRLTFPSCALLGVVLLTTQQCANTARHPICRMLEDGGGHRRPTRSSback to top mRNA from alignment at Ecto-sp13_S_contig6207:1959..7361+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6207.16928.1 ID=mRNA_Ecto-sp13_S_contig6207.16928.1|Name=mRNA_Ecto-sp13_S_contig6207.16928.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5403bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6207:1959..7361+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6207:1959..7361+ >mRNA_Ecto-sp13_S_contig6207.16928.1 ID=mRNA_Ecto-sp13_S_contig6207.16928.1|Name=mRNA_Ecto-sp13_S_contig6207.16928.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1854bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6207:1959..7361+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |