prot_Ecto-sp13_S_contig6202.16921.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6202.16921.1
Unique Nameprot_Ecto-sp13_S_contig6202.16921.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length566
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6202.16921.1 vs. uniprot
Match: D7FRQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ8_ECTSI)

HSP 1 Score: 651 bits (1680), Expect = 1.400e-228
Identity = 468/565 (82.83%), Postives = 474/565 (83.89%), Query Frame = 0 
Query:    1 MAASELSELRAELWRTRDDLERIKSRGTPPSADSSPRRHFDRRRHRASPSPTLAAATVREVRNKDRDHRRHRHSEQHKDDGLEGGRGVRGGSGXXIRXXXXXXXXXXXXXPGSGADYDDEAPRGLGGTAASGSSPDGRQLKFGSSDGGVGSASSEGENAAKGGSSEEVAAEETLCNLELEGAAFKNWTEEASSIAVRLIEEVKMLRWEKASWTERERAAGRASERAAAEARAQAAHLEERLGLAEADGRKAQEALARAQQDVERERARTKTERAKAEGLRTAAXXXXXXXXXXXXXXXXXXYDXXXXXXXXXXXXXXXXXXXXXXLVEMLRREKEGADALQRRLDAARAASAKHEKERKEWRSSKARLEELRRSWGKQLNKGGGGGLACASVEKKMRSMAKENAALRARVGEAERARDRADADSLGHREELRRLTEQRDNLLLGATRLGGRRGLAASSSAETLXXXXXXXXXXXXXDANDVGPGAEGELEAQLEEARSEAKLARVAAQQERLRREAAAREKEEAVRQLHRLMGAARRAVGRRDSRLKSSRMETEVVWNALTEAVR 565
            MAASELSELRAELWRTRDDLERIKSRGTPPSAD SPRRHFDRRRHRASPSPTLAA T  EVRNKDRD+RRHRHSEQHK DGLE G G RG SG  IR X XXXXXXXXXXPGSGADYDDEAPRGLGGTA+SGSS  GRQLKFGSS G VGSASSEGENAAKGGSSEEVAAEETLCNLELEGAAFKNWTEEASSIAVRLIEEVKMLRWEKASW ERERAA             QA HLEERLGLAEADGR+AQEALARAQQDVER           AEGLR A XXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXLVEMLRREKEGADALQRRLDAARAASA+HEKERKEWRSS                                  M KENAALRARVGEAERARDRADADSLGHREELRRLTEQRDNLLLGATRLGGRRGL ASS AETL      XXXXXXXDA DVGPGA+GELEAQLE+ARSEAKLARVAAQQERLRREAAAREKEEAVRQLHRLMGAARRAVGRRDSRLKSSRMETEVVWNALTEAVR
Sbjct:    1 MAASELSELRAELWRTRDDLERIKSRGTPPSADCSPRRHFDRRRHRASPSPTLAATTACEVRNKDRDYRRHRHSEQHKGDGLEAGGGARGDSGGGIRSXPXXXXXXXXXXPGSGADYDDEAPRGLGGTASSGSSHGGRQLKFGSSRGRVGSASSEGENAAKGGSSEEVAAEETLCNLELEGAAFKNWTEEASSIAVRLIEEVKMLRWEKASWAERERAAEXXXXXXXXXXXXQADHLEERLGLAEADGRRAQEALARAQQDVERXXXXXXXXXXXAEGLRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVEMLRREKEGADALQRRLDAARAASARHEKERKEWRSSXXXXXXXXXXXXXXXX----------XXXXXXXXMTKENAALRARVGEAERARDRADADSLGHREELRRLTEQRDNLLLGATRLGGRRGLVASSPAETLAELLAAXXXXXXXDATDVGPGADGELEAQLEQARSEAKLARVAAQQERLRREAAAREKEEAVRQLHRLMGAARRAVGRRDSRLKSSRMETEVVWNALTEAVR 555
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6202.16921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRQ8_ECTSI1.400e-22882.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
NoneNo IPR availableCOILSCoilCoilcoord: 220..275
NoneNo IPR availableCOILSCoilCoilcoord: 389..423
NoneNo IPR availableCOILSCoilCoilcoord: 486..534
NoneNo IPR availableCOILSCoilCoilcoord: 330..371
NoneNo IPR availableCOILSCoilCoilcoord: 292..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6202contigEcto-sp13_S_contig6202:2291..4672 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6202.16921.1mRNA_Ecto-sp13_S_contig6202.16921.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6202 2291..4672 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6202.16921.1 ID=prot_Ecto-sp13_S_contig6202.16921.1|Name=mRNA_Ecto-sp13_S_contig6202.16921.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=566bp
MAASELSELRAELWRTRDDLERIKSRGTPPSADSSPRRHFDRRRHRASPS
PTLAAATVREVRNKDRDHRRHRHSEQHKDDGLEGGRGVRGGSGGGIRSGP
TSPPTSGGSSPGSGADYDDEAPRGLGGTAASGSSPDGRQLKFGSSDGGVG
SASSEGENAAKGGSSEEVAAEETLCNLELEGAAFKNWTEEASSIAVRLIE
EVKMLRWEKASWTERERAAGRASERAAAEARAQAAHLEERLGLAEADGRK
AQEALARAQQDVERERARTKTERAKAEGLRTAAATAAAAASAAQQEKEKM
RYDQQRKEEARQQQERDAAAGGGGGLVEMLRREKEGADALQRRLDAARAA
SAKHEKERKEWRSSKARLEELRRSWGKQLNKGGGGGLACASVEKKMRSMA
KENAALRARVGEAERARDRADADSLGHREELRRLTEQRDNLLLGATRLGG
RRGLAASSSAETLAELLAAAAAGASADANDVGPGAEGELEAQLEEARSEA
KLARVAAQQERLRREAAAREKEEAVRQLHRLMGAARRAVGRRDSRLKSSR
METEVVWNALTEAVR*
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