prot_Ecto-sp13_S_contig620.16918.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig620.16918.1
Unique Nameprot_Ecto-sp13_S_contig620.16918.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length547
Homology
BLAST of mRNA_Ecto-sp13_S_contig620.16918.1 vs. uniprot
Match: A0A6H5JH78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH78_9PHAE)

HSP 1 Score: 689 bits (1779), Expect = 3.470e-244
Identity = 434/552 (78.62%), Postives = 444/552 (80.43%), Query Frame = 0
Query:    1 MTVDNSQFAPSDVIVLQATTAAVDTAPVLAASPLDSGKRAGRRSSDLAMSSDNKVCQQRQHEQQKQPAATEPRRQALPSGNNEEFKSGTVGEKQNATNPAAASTAPVKDNDAVXXXXXXXXXXXXXXPVVKQAPTRAEAAVEQAINSNPAAPAATSAAKWVRVGEKVCFSTIVAAVLIPSSHDLTVDTKRELWWQPTDYAEFRVNYATHMHNPSIELEEQEREETMGPAPVVPTTANADTPASTATVEGVLVVAASPAPAPLAARPVNPVEATAGASGRRHGNXXXXXXXXXXXXXXXXXXXPSQERGSKSYRQERRQ--WSPAGPNRSHQXXXXXXXKSPPTGPRRVSVPAGYPQQQQVSPHHASHMRQQYP----NVHPQQQPVMMMRGHPGYGNGHAAAAGLGRRDARHDRYLAPRGVNMNNAHXXXXXXXXXXXXXXXXXXLFVNGNPSGVNCPPQQHQQQQRMSSPAFRGVNANGPVVQAFLPHQAPGGLRGGVATAPATLAFPSRSGMTSPPHSAVAGGVVGNGNPSSQFSMWRSQLVFAPAMQMQ 546
            MTVDNSQFAPSDVIVLQA TAAVDTA  LAASPLDSGKRAGRR SDLAMSSDNK   QRQHEQQKQPA T+PRRQALP GNNEEFK G VG K+                   XXXXXXXXXX    P  KQAPTRAEAAVEQAIN+ PAAPAA SA KWVRVGEKVCFSTIVAAVLIPSSHDLTV TKRELWWQPTDYAEFRVNYATHMHNPSIELEEQER+ETMGPAPVVPTTANADTPASTATVEGVLVVAASPAPAPLAARPVNP+EATAGASGRRHGN                   PSQER SKSYRQER Q  WS AGPNR HQ       K+PP GPRRVS PAG+PQQ                    NVHPQQQPV+MM GHPGYGN HAAAAGLGRRDARHDRYLAPRGVNMN+AHXXXXXXXXXXXXXXXXXX  VNGNPSGVNCPPQQ  QQQRMS PAFRGVNANGPVVQAFLPHQAPGG+RGGV  APAT  FPSR GM SPPHSAVAGGVVGNGNPSSQFSMWRSQLVFAPAMQMQ
Sbjct:    1 MTVDNSQFAPSDVIVLQAATAAVDTARALAASPLDSGKRAGRRRSDLAMSSDNK---QRQHEQQKQPAPTQPRRQALPGGNNEEFKGGRVGGKEXXXXXXXXXXX---XXXXXXXXXXXXXXXTAVAPAAKQAPTRAEAAVEQAINNIPAAPAAASAPKWVRVGEKVCFSTIVAAVLIPSSHDLTVATKRELWWQPTDYAEFRVNYATHMHNPSIELEEQERQETMGPAPVVPTTANADTPASTATVEGVLVVAASPAPAPLAARPVNPLEATAGASGRRHGNGGGGNHKVGIDAGGGAAA-PSQERVSKSYRQERNQRPWSSAGPNRLHQHQH----KTPPAGPRRVSGPAGFPQQXXXXXXXXXXXXXXXXXXXXNVHPQQQPVVMMGGHPGYGNVHAAAAGLGRRDARHDRYLAPRGVNMNHAHXXXXXXXXXXXXXXXXXXX-VNGNPSGVNCPPQQ--QQQRMSRPAFRGVNANGPVVQAFLPHQAPGGVRGGVVLAPATTGFPSRGGMGSPPHSAVAGGVVGNGNPSSQFSMWRSQLVFAPAMQMQ 538          
BLAST of mRNA_Ecto-sp13_S_contig620.16918.1 vs. uniprot
Match: D7G8G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G4_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 6.850e-122
Identity = 315/547 (57.59%), Postives = 318/547 (58.14%), Query Frame = 0
Query:    1 MTVDNSQFAPSDVIVLQATTAAVDTAPVLAASPLDSGKRAGRRSSDLAMSSDNKVCQQRQHEQQKQPAATEPRRQALPSGNNEEFKSGTVGEKQNATNPAAASTAPVKDNDAVXXXXXXXXXXXXXXPVVKQAPTRAEAAVEQAINSNPAAPAATSAAKWVRVGEKVCFSTIVAAVLIPSSHDLTVDTKRELWWQPTDYAEFRVNYATHMHNPSIELEEQEREETMGPAPVVPTTANADTPASTATVEGVLVVAASPAPAPLAARPVNPVEATAGASGRRHGNXXXXXXXXXXXXXXXXXXXPSQERGSKSYRQERRQWSPAGPNRSHQXXXXXXXKSPPTGPRRVSVPAGYPQQQQVSPHHASHMRQQYPNVHPQQQPVMMMRGHPGYGNGHAAAAGLGRRDARHDRYLAPRGVNMNNAHXXXXXXXXXXXXXXXXXXLFVNGNPSGVNCPPQQHQQQQRMSSPAFRGVNANGPVVQAFLPHQAPGGLRGGVATAPATLAFPSRSGM-TSPPHSAVAGGVVGNGNPSSQFSMWRSQLVFAPAMQMQ 546
            MTVDNSQFAPSDVIVLQA TAAVDTAP LAASPL+SGKRA RRSSDLAMS                                                               XXXXXXXXXXXXXX                            SA KWVRVGEKVCFSTIVAAVLIPSSHDLTV TKRELWWQPTDYAEFRVNYATHMHNPSIELEE                                          LAARPVNP+EATAGASGRRH  XXXXXXXXXXXXXXXXX  PSQER SK YRQER                                                             QPVMMMRGHPGYGNGHAAAAGLGRRDARHDRYLAPRGVNMNNAHXXXXXXXXXXXXXXX        NPSGVNC         RMS PAFRGVNANGPVVQAFLPHQAPGG+RGGVA APAT AFPSR GM  SPPHSAVA GVVGNGNPSSQFSMWRSQLVFAPAMQMQ
Sbjct:    1 MTVDNSQFAPSDVIVLQAATAAVDTAPALAASPLESGKRAARRSSDLAMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPKWVRVGEKVCFSTIVAAVLIPSSHDLTVATKRELWWQPTDYAEFRVNYATHMHNPSIELEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAARPVNPLEATAGASGRRHXXXXXXXXXXXXXXXXXXXAAPSQERVSKPYRQER-------------------------------------------------------------QPVMMMRGHPGYGNGHAAAAGLGRRDARHDRYLAPRGVNMNNAHXXXXXXXXXXXXXXX---XXXXXNPSGVNCXXXXXXXX-RMSPPAFRGVNANGPVVQAFLPHQAPGGVRGGVAMAPATPAFPSRGGMMASPPHSAVAAGVVGNGNPSSQFSMWRSQLVFAPAMQMQ 479          
BLAST of mRNA_Ecto-sp13_S_contig620.16918.1 vs. uniprot
Match: D8LTF9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF9_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.090e-9
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 0
Query:  146 NSNPAAPAAT--SAAKWVRVGEKVCFSTIVAAVLIPSSHDLTVDTKRELWWQPTDYAEFRVNYATHMHNP 213
            ++ P A AA   +AA  VRVG +V F+T+VAA+LIPS+ DL    ++ELWWQ TDY +FR+N+   M +P
Sbjct:  109 SARPGASAAKRQAAAACVRVGSRVSFNTVVAAILIPSAKDLHAAARQELWWQETDYRDFRINFIQFMRSP 178          
BLAST of mRNA_Ecto-sp13_S_contig620.16918.1 vs. uniprot
Match: A0A6H5JK69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK69_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.430e-9
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 0
Query:  146 NSNPAAPAAT--SAAKWVRVGEKVCFSTIVAAVLIPSSHDLTVDTKRELWWQPTDYAEFRVNYATHMHNP 213
            ++ P A AA   +AA  VRVG +V F+T+VAA+LIPS+ DL    ++ELWWQ TDY +FR+N+   M  P
Sbjct:  105 SARPGASAAKRQAAAACVRVGSRVSFNTVVAAILIPSAKDLHAAARQELWWQETDYRDFRINFIQFMRTP 174          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig620.16918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JH78_9PHAE3.470e-24478.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8G4_ECTSI6.850e-12257.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LTF9_ECTSI1.090e-950.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK69_9PHAE1.430e-950.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig620contigEcto-sp13_S_contig620:4924..10231 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig620.16918.1mRNA_Ecto-sp13_S_contig620.16918.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig620 4924..11347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig620.16918.1 ID=prot_Ecto-sp13_S_contig620.16918.1|Name=mRNA_Ecto-sp13_S_contig620.16918.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=547bp
MTVDNSQFAPSDVIVLQATTAAVDTAPVLAASPLDSGKRAGRRSSDLAMS
SDNKVCQQRQHEQQKQPAATEPRRQALPSGNNEEFKSGTVGEKQNATNPA
AASTAPVKDNDAVAEEEEEEEEDAAAAPVVKQAPTRAEAAVEQAINSNPA
APAATSAAKWVRVGEKVCFSTIVAAVLIPSSHDLTVDTKRELWWQPTDYA
EFRVNYATHMHNPSIELEEQEREETMGPAPVVPTTANADTPASTATVEGV
LVVAASPAPAPLAARPVNPVEATAGASGRRHGNGGGGGNHKVGISGGGGA
AAPSQERGSKSYRQERRQWSPAGPNRSHQHQHQHQHKSPPTGPRRVSVPA
GYPQQQQVSPHHASHMRQQYPNVHPQQQPVMMMRGHPGYGNGHAAAAGLG
RRDARHDRYLAPRGVNMNNAHHHHNGAAAAAARHVQQQQLFVNGNPSGVN
CPPQQHQQQQRMSSPAFRGVNANGPVVQAFLPHQAPGGLRGGVATAPATL
AFPSRSGMTSPPHSAVAGGVVGNGNPSSQFSMWRSQLVFAPAMQMQ*
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