mRNA_Ecto-sp13_S_contig62.16917.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig62.16917.1
Unique NamemRNA_Ecto-sp13_S_contig62.16917.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig62.16917.1 vs. uniprot
Match: D8LEF3_ECTSI (Putative hUPF2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF3_ECTSI)

HSP 1 Score: 986 bits (2550), Expect = 0.000e+0
Identity = 829/959 (86.44%), Postives = 831/959 (86.65%), Query Frame = 1 
Query:    1 MSSSGGGEGRSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKPASSTPSTTEATAXXXXXXXXXXXXXXXXXXXXXXAAAGERDDGLVPGAGLLALQALAPAQKKSKADPKTPTAVPAPQXXXXXXPKDRAGXXXXXXXXXRSTGRGVKAAGGRDTGGKTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPSGKGTGARQLSEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXKAXXXXXAAEEQRARREAEXXXXXXXXXXXXXXXXXXXXXXXEVKRKAEEKKXXXXXXXXXXXXXXXXXXXXAERKAXXERKAAEXXXXXAAXXXXXXXXXXXXXXXXXXXXXXAQLEAVSQLDLLQKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAIFLSAPSGEE-REEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESEXXXXXXXXXXXXXXXXXXXXXXEGEGGKEEAEAEXXXDKTLVEEMKRLEVVAEEGEXXXXXXXXXXXXXXXXXXXXXXG-EGGEYMSRNSRLMLMLEDELPNCHNQERVDEFAKKFCYVNSKSARKKLVAALFNVPRQALDLLPMYARLVAILDQAMKTIAPLLIEELRSHFR 2871
            MSSSGGGEGRSR  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    TSKPASSTPSTTEAT XXXXXXXXXXXXXXXXXXXX   AAG+RDDGLVPG+GLLALQALAPAQKKSKADPKTPTA   PQXXXXXX K RAG    XXXXX    RG K AGGRDTGGKTAAT             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RKPSGKGTGARQLSEEEE                     XXXXXX  XXXXXAAEEQRARREAEXXXXXXXXXXXXXXXXXXXXXXXEVKRKAE   XXXXXXXXXXXXXXXXXXXXAERKAXX      XXXXX  XXXXXXXXXXXXXXXXXXXX  AQLEAVSQLDLLQKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAA FLSAP GEE REEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARR DHQTVTAAPPPLRE DVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESE                      EGE         XX DKTLVEEMKRLEVVAEEGE             XXXXXXXXX  EGGEYMSRNSRLMLMLEDELPNCHNQERVDEFAKKFCYVNSKSARKKLVAALFNVPRQA DLLPMYARLVAILDQAMKTIAPLLIEELRSHFR
Sbjct:    1 MSSSGGGEGRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNRTSKPASSTPSTTEATXXXXXXXXXXXXXXXXXXXXXA-TAAGKRDDGLVPGSGLLALQALAPAQKKSKADPKTPTAAAVPQXXXXXXXKGRAGGSASXXXXXXXXXRGAKGAGGRDTGGKTAATTATQQERSGKALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RKPSGKGTGARQLSEEEEGERSREAAKQLAAQKEARKRAXXXXXXXXXXXXXAAEEQRARREAEXXXXXXXXXXXXXXXXXXXXXXXEVKRKAEXXXXXXXXXXXXXXXXXXXXXXXAERKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEAQLEAVSQLDLLQKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAPFLSAPGGEEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRPDHQTVTAAPPPLREADVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESEREEERRLQKERSAGDA------EGEXXXXXXXXXXXDDKTLVEEMKRLEVVAEEGEEEGAGTDDEEEEGXXXXXXXXXXXEGGEYMSRNSRLMLMLEDELPNCHNQERVDEFAKKFCYVNSKSARKKLVAALFNVPRQARDLLPMYARLVAILDQAMKTIAPLLIEELRSHFR 951
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BLAST of mRNA_Ecto-sp13_S_contig62.16917.1 vs. uniprot
Match: A0A835YRH9_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH9_9STRA)

HSP 1 Score: 371 bits (952), Expect = 1.380e-107
Identity = 240/556 (43.17%), Postives = 314/556 (56.47%), Query Frame = 1 
Query: 1270 QKEERARRELREKHTPEALKASRDAHEANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAIFLSAPSGEEREEKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESEXXXXXXXXXXXXXXXXXXXXXXEGEGGKE----------------------EAEAEXXXDKTLVEEMKRLEVVAEEGEXXXXXXXXXXXXXXXXXXXXXXGEGGEYMSRNSRLMLMLEDELPNCHNQERVDEFAKKFCYVNSKSARKKLVAALFNVPRQALDLLPMYARLVAILDQAMKTIAPLLIEELRSHFR 2871
            Q+++  RR LR ++TP A+ ASR +H ANK KLKSDLKKT+ FT KV+ L+E QR+ +TKD+ETLNL+ YVSE+VDAVAE +LK +DVSVAVHLCC+MHQRYA F EDLIPKL A F   P+ +   +K+ LR++RSNLRLLTELH  GVFDGS+ ++ ++R L G                  R  H TV AAP  LR  DV+L+  F + AG+++ G++ R++  +     +    ER  VV A+ +     ++ GV   L  HL   H+ L +LE++MEKDRL  G+LTEEKERNLE S   Y  LL NV +L+ +L+ DMP LPE + EEE  GG+ LW  GVG  G G  GP+++ E                        E  +E                      +A A    D  L  E+++L V                             E G            L +ELP C N+ER D FA KFC+ NSKSAR+KLV ALF  PRQ+LDLLP YARLVA LDQ ++ IAP L ++L+  FR
Sbjct:    8 QRKDEERRALRARNTPGAVAASRASHNANKSKLKSDLKKTSTFTSKVRTLTEAQRATITKDIETLNLSHYVSEIVDAVAEAKLKTSDVSVAVHLCCMMHQRYAGFTEDLIPKLLAPFREDPAED---DKDALRKRRSNLRLLTELHLCGVFDGSQWLLNVLRRLAGERRXXXXXXXXXXXXXXHRSAHATVEAAPADLRPNDVSLVVAFAKHAGQELAGIVPRRSGRLAVF--QRSSQERLRVVSAEGQALFLGVLQGVLRRLRGHLVTAHKALQKLERRMEKDRLLCGSLTEEKERNLELSAGAYNKLLSNVVALSDALDEDMPDLPEDKEEEE-LGGVELWSSGVG-LGEGDLGPWDDLETKSFYEDLADLLTAVPPSQLGLTEEQWQELRAQQDARESRQRSGDGXXXXXDAAAGAEEDADLAAELQKLSVQ----------------------------ESGXXXXXXXXXXX-LREELPACFNRERTDAFAIKFCHHNSKSARRKLVRALFEAPRQSLDLLPQYARLVATLDQVLRDIAPALTDDLQGEFR 527
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BLAST of mRNA_Ecto-sp13_S_contig62.16917.1 vs. uniprot
Match: C3YPG4_BRAFL (Uncharacterized protein (Fragment) n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YPG4_BRAFL)

HSP 1 Score: 207 bits (526), Expect = 3.150e-51
Identity = 158/522 (30.27%), Postives = 247/522 (47.32%), Query Frame = 1 
Query: 1363 KLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAIFLSAPSGEEREEKELLRRKRSNLRLLTELHASGVF---DGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESEXXXXXXXXXXXXXXXXXXXXXXEGE--GGKEEAEAEXXXDKTLVEEMKRLEVVA-------------EEGEXXXXXXXXXXXXXXXXXXXXXXGEGGEYMSRNSRLMLMLEDELPNCHNQERVDEFAKKFCY-VNSKSARKKLVAALFNVPRQALDLLPMYARLVAILDQAMKTIAPLLIEELRSHFR 2871
            KL S LKK TAF KK+K ++E QR +LTK+  +LNL +Y+ E V++  E +LK +DV+ AVHLC   HQRYAEF   L+      F +    +E ++KE   + R ++RL+ EL  +GVF   +G  L+   +++L      DG ++                          ++T+L+ F R  GED  G++ RK   +      +  L +  V   +++G+ R L+   F +L  HL++ H+ L        +   T G L+EE++++ E+++  Y+ LL N ++LA  L+ DMP LPE + +EE  G + ++    GGDG        E E                      + E    ++EAEAE    +  VE ++ +EVV               + E                      G  G   S    L+     +LPNC N+E +D    +FC  +N+K+ R+KLV ALF V R  +DLLP Y+RLVA L      +A  L+  L+  F+
Sbjct:   11 KLDSSLKKNTAFVKKLKTITEQQRESLTKEFNSLNLTKYIGEAVNSFVEAKLKMSDVNCAVHLCSKFHQRYAEFTPQLLQAWNKSFQARRDDKEEKKKEKGDKLRVDIRLVAELTVAGVFTDKEGLPLVASQLKALI-----DGDKE-----------------------AHNNLTILSSFCRHCGEDYAGLVPRKNRSLADKYNVI--LPKSEVFPCEIQGKCRQLLKDYFTSLVKHLQKDHKALQNQAWNNRRTLQTKGELSEERQKSFEDAQAAYQKLLMNASTLADLLDEDMPDLPEDDFKEEEEGNVDIFLAIKGGDGEIGENTLWEDEETRSFYENLPNLKEFLPAILFKDSEKKSNEQEAEAEVDTPEDTVEALEEVEVVXXXXXXXXXXXXXXSQAEMSVEDIEKEILGSVEDVDDDAEGASG---SSTKMLLEGFLQQLPNCVNREFIDNAGLEFCMNMNNKTNRRKLVRALFTVHRTRIDLLPFYSRLVATLQPCTPDVADDLVAMLKGDFK 499
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BLAST of mRNA_Ecto-sp13_S_contig62.16917.1 vs. uniprot
Match: A0A6P4ZV22_BRABE (regulator of nonsense transcripts 2-like n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZV22_BRABE)

HSP 1 Score: 202 bits (515), Expect = 1.150e-49
Identity = 180/528 (34.09%), Postives = 268/528 (50.76%), Query Frame = 1 
Query: 1363 KLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAIFLSAPSGEEREEKELLRRKRSNLRLLTELHASGVF---DGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSGGISLWEGGVGGDGT-GYTGPFEESEXXXXXXXXXXXXXXXXXXXXXXEGEGGKE-EAEAEXXXD--KTLVEEMKRLEVVAEEGEXXXXXXXXXXXXXXXXXXXXXX---------------GEGGEYMSRNSRLMLM--LEDELPNCHNQERVDEFAKKFCY-VNSKSARKKLVAALFNVPRQALDLLPMYARLVAILDQAMKTIAPLLIEELRSHFR 2871
            KL S LKK TAF KK+K ++E QR +LTK+  +LNL +Y+ E V++  E +LK +DVS AVHLC L HQRYAEF   L+      F +    +E ++KE   + R +LR + EL  +GVF   +G  L+   +++L      DG ++                          ++T+L+ F R  GED  G++ RK   +      +  L +  V  ++++G+ R L+   F +L  HL++ H+ L        +   T G L+E+++++ E+++  Y+ LL N ++LA  L+ DMP LPE + +EE  G + ++    GG+G  G    +E+ E                        +  KE EAEA+   D  + L EEM  LE+ AE  E  XXXXXXXXXXXXXX                      E  E  S +S  ML+     +LPNC N+E +D    +FC  +N+K+ R+KLV ALF V R  +DLLP Y+RLVA L      +A  L+  L+  FR
Sbjct:  290 KLDSSLKKNTAFVKKLKTITEQQRESLTKEFNSLNLTKYIGEAVNSFVEAKLKMSDVSCAVHLCSLFHQRYAEFTPQLLQTWNKSFQARRDDKEEKKKEKGDKLRVDLRQVAELTVAGVFTDKEGLPLVASQLKALI-----DGDKE-----------------------VHNNLTVLSSFCRHCGEDYAGLVPRKNRSLADKYNVI--LPKSEVFPSEIQGKCRQLLKDYFTSLVKHLQKDHKALQNQAWNNRRTLQTKGELSEDRQKSFEDAQAAYQKLLMNASTLADLLDEDMPDLPEDDFKEEEEGNVDIFLAIKGGEGEIGENTLWEDEETRSFYENLPNLKEFLPAILFKDSEKKSKEQEAEADTPEDTVEALEEEMSNLEL-AEAVEVAXXXXXXXXXXXXXXAQAEMSVEDIEKEILGTVEDVDEDTEGASGSSTKMLLEGFLQQLPNCVNREFIDNAGLEFCMNMNNKTNRRKLVRALFTVHRTRIDLLPFYSRLVATLQPCTPDVADDLVAMLKGDFR 786
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BLAST of mRNA_Ecto-sp13_S_contig62.16917.1 vs. uniprot
Match: A0A4W5NMR8_9TELE (UPF2 regulator of nonsense mediated mRNA decay n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5NMR8_9TELE)

HSP 1 Score: 199 bits (507), Expect = 9.030e-49
Identity = 163/517 (31.53%), Postives = 250/517 (48.36%), Query Frame = 1 
Query: 1363 KLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAIFLSAPSGEEREEKELLRRKRSNLRLLTELHASGVF---DGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREP--VVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLP-EHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESEXXXXXXXXXXXXXXXXXXXXXXEGEGGKEEAEAEXXXDKTLVEEMKRLEV----VAEEGEXXXXXXXXXXXXXXXXXXXXXXGEGGEYMSRNSRLMLMLE---DELPNCHNQERVDEFAKKFCY-VNSKSARKKLVAALFNVPRQALDLLPMYARLVAILDQAMKTIAPLLIEELRSHFR 2871
            +L S LKK TAF KK++ L+E QR AL+ D  +LNL++Y+ E V +V E +LK +DVS AVHLC L HQRYAEFA  L+      F       + E+   + + R++LR + EL   G+F   +G  LI   ++S+ G                    D +T          T V+++  F +  G+D+ G++ RK    +K A E   L   P  +++ + +   ++L+   F +L  HL++ H +L  +E++  +   + G L+E++ +  EE    Y+ LL N  SLA  L+ +MP+LP +   +EE   GI ++  G  G+     G   E E                      + E GK++ EA    D     E   LE+    +A++                         +  E  S  S L L+++    +LPNC N++ +D+ A  FC  +N+KS R+KLV ALF VPRQ LDLLP Y+RLVA L   M  +A  L   L+  FR
Sbjct:  164 RLDSSLKKNTAFVKKLRTLTEQQREALSNDFGSLNLSKYIGEAVGSVVEAKLKISDVSCAVHLCSLFHQRYAEFAPLLLQAWKRHF----EARKEEKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIYEQLKSIIGT-------------------DRET---------HTHVSVVISFCKHCGDDIAGLVPRK----VKAAREKFGLAFPPSEIINTEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQSLADFLDENMPELPLDKTVQEEHGPGIDIFTPGKPGE-YDLEGGIWEDEDARNFYENMVDLKAFVPAILFKDNEKGKDKEEAAEAKDAAATTEELELELEALDIADDPLELDGPDEAENEAELAKKLLDEQEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKSNRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVADDLCSILKGDFR 643
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BLAST of mRNA_Ecto-sp13_S_contig62.16917.1 vs. uniprot
Match: UPI001130AF8C (regulator of nonsense transcripts 2-like isoform X6 n=1 Tax=Oncorhynchus nerka TaxID=8023 RepID=UPI001130AF8C)

HSP 1 Score: 198 bits (503), Expect = 2.880e-48
Identity = 162/517 (31.33%), Postives = 249/517 (48.16%), Query Frame = 1 
Query: 1363 KLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAIFLSAPSGEEREEKELLRRKRSNLRLLTELHASGVF---DGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREP--VVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLP-EHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESEXXXXXXXXXXXXXXXXXXXXXXEGEGGKEEAEAEXXXDKTLVEEMKRLEV----VAEEGEXXXXXXXXXXXXXXXXXXXXXXGEGGEYMSRNSRLMLMLE---DELPNCHNQERVDEFAKKFCY-VNSKSARKKLVAALFNVPRQALDLLPMYARLVAILDQAMKTIAPLLIEELRSHFR 2871
            +L S LKK TAF KK++ L+E QR AL+ D  +LNL++Y+ E V +V E +LK +DV  AVHLC L HQRYAEFA  L+      F       + E+   + + R++LR + EL   G+F   +G  LI   ++S+ G                    D +T          T V+++  F +  G+D+ G++ RK    +K A E   L   P  +++ + +   ++L+   F +L  HL++ H +L  +E++  +   + G L+E++ +  EE    Y+ LL N  SLA  L+ +MP+LP +   +EE   GI ++  G  G+     G   E E                      + E GK++ EA    D     E   LE+    +A++                         +  E  S  S L L+++    +LPNC N++ +D+ A  FC  +N+KS R+KLV ALF VPRQ LDLLP Y+RLVA L   M  +A  L   L+  FR
Sbjct:  164 RLDSSLKKNTAFVKKLRTLTEQQREALSNDFGSLNLSKYIGEAVGSVVEAKLKISDVGCAVHLCSLFHQRYAEFAPLLLQAWKRHF----EARKEEKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIYEQLKSIIGT-------------------DRET---------HTHVSVVISFCKHCGDDIAGLVPRK----VKAAREKFGLAFPPSEIINTEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQSLADFLDENMPELPLDKTVQEEHGPGIDIFTPGKPGE-YDLEGGIWEDEDARNFYENMVDLKAFVPAILFKDNEKGKDKEEAAEAKDAAATTEELELELEALDIADDPLELDGPDEAENEAELAKKLLDEQEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKSNRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVADDLCSILKGDFR 643
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BLAST of mRNA_Ecto-sp13_S_contig62.16917.1 vs. uniprot
Match: UPI001878107F (regulator of nonsense transcripts 2 isoform X6 n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=UPI001878107F)

HSP 1 Score: 198 bits (503), Expect = 2.880e-48
Identity = 162/517 (31.33%), Postives = 249/517 (48.16%), Query Frame = 1 
Query: 1363 KLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAIFLSAPSGEEREEKELLRRKRSNLRLLTELHASGVF---DGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREP--VVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLP-EHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESEXXXXXXXXXXXXXXXXXXXXXXEGEGGKEEAEAEXXXDKTLVEEMKRLEV----VAEEGEXXXXXXXXXXXXXXXXXXXXXXGEGGEYMSRNSRLMLMLE---DELPNCHNQERVDEFAKKFCY-VNSKSARKKLVAALFNVPRQALDLLPMYARLVAILDQAMKTIAPLLIEELRSHFR 2871
            +L S LKK TAF KK++ L+E QR AL+ D  +LNL++Y+ E V +V E +LK +DV  AVHLC L HQRYAEFA  L+      F       + E+   + + R++LR + EL   G+F   +G  LI   ++S+ G                    D +T          T V+++  F +  G+D+ G++ RK    +K A E   L   P  +++ + +   ++L+   F +L  HL++ H +L  +E++  +   + G L+E++ +  EE    Y+ LL N  SLA  L+ +MP+LP +   +EE   GI ++  G  G+     G   E E                      + E GK++ EA    D     E   LE+    +A++                         +  E  S  S L L+++    +LPNC N++ +D+ A  FC  +N+KS R+KLV ALF VPRQ LDLLP Y+RLVA L   M  +A  L   L+  FR
Sbjct:  164 RLDSSLKKNTAFVKKLRTLTEQQREALSNDFGSLNLSKYIGEAVGSVVEAKLKISDVGCAVHLCSLFHQRYAEFAPLLLQAWKRHF----EARKEEKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIYEQLKSIIGT-------------------DRET---------HTHVSVVISFCKHCGDDIAGLVPRK----VKAAQEKFGLAFPPSEIINTEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQSLADFLDENMPELPLDKTVQEEHGPGIDIFTPGKPGE-YDLEGGIWEDEDARNFYENMVDLKAFVPAILFKDNEKGKDKEEAAEAKDAAATTEELELELESLDIADDPLELDGPDEAENEAELAKKLLDEQEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKSNRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVADDLCSILKGDFR 643
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BLAST of mRNA_Ecto-sp13_S_contig62.16917.1 vs. uniprot
Match: UPI001C3D3F3A (regulator of nonsense transcripts 2-like isoform X6 n=1 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=UPI001C3D3F3A)

HSP 1 Score: 198 bits (503), Expect = 3.030e-48
Identity = 162/517 (31.33%), Postives = 249/517 (48.16%), Query Frame = 1 
Query: 1363 KLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAIFLSAPSGEEREEKELLRRKRSNLRLLTELHASGVF---DGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREP--VVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLP-EHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESEXXXXXXXXXXXXXXXXXXXXXXEGEGGKEEAEAEXXXDKTLVEEMKRLEV----VAEEGEXXXXXXXXXXXXXXXXXXXXXXGEGGEYMSRNSRLMLMLE---DELPNCHNQERVDEFAKKFCY-VNSKSARKKLVAALFNVPRQALDLLPMYARLVAILDQAMKTIAPLLIEELRSHFR 2871
            +L S LKK TAF KK++ L+E QR AL+ D  +LNL++Y+ E V +V E +LK +DV  AVHLC L HQRYAEFA  L+      F       + E+   + + R++LR + EL   G+F   +G  LI   ++S+ G                    D +T          T V+++  F +  G+D+ G++ RK    +K A E   L   P  +++ + +   ++L+   F +L  HL++ H +L  +E++  +   + G L+E++ +  EE    Y+ LL N  SLA  L+ +MP+LP +   +EE   GI ++  G  G+     G   E E                      + E GK++ EA    D     E   LE+    +A++                         +  E  S  S L L+++    +LPNC N++ +D+ A  FC  +N+KS R+KLV ALF VPRQ LDLLP Y+RLVA L   M  +A  L   L+  FR
Sbjct:  164 RLDSSLKKNTAFVKKLRTLTEQQREALSNDFGSLNLSKYIGEAVGSVVEAKLKISDVGCAVHLCSLFHQRYAEFAPLLLQAWKRHF----EARKEEKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIYEQLKSIIGT-------------------DRET---------HTHVSVVISFCKHCGDDIAGLVPRK----VKAAREKFGLAFPPSEIINTEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQSLADFLDENMPELPLDKTVQEEHGPGIDIFTPGKPGE-YDLEGGIWEDEDARNFYENMVDLKAFVPAILFKDNEKGKDKEEAAEAKDAAATTEELELELEALDIADDPLELDGPDEAENEAELAKKLLDEQEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKSNRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVADDLCSILKGDFR 643
[Close]
BLAST of mRNA_Ecto-sp13_S_contig62.16917.1 vs. uniprot
Match: A0A4W5MTL3_9TELE (UPF2 regulator of nonsense mediated mRNA decay n=2 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5MTL3_9TELE)

HSP 1 Score: 197 bits (500), Expect = 4.070e-48
Identity = 162/517 (31.33%), Postives = 249/517 (48.16%), Query Frame = 1 
Query: 1363 KLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAIFLSAPSGEEREEKELLRRKRSNLRLLTELHASGVF---DGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREP--VVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLP-EHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESEXXXXXXXXXXXXXXXXXXXXXXEGEGGKEEAEAEXXXDKTLVEEMKRLEV----VAEEGEXXXXXXXXXXXXXXXXXXXXXXGEGGEYMSRNSRLMLMLE---DELPNCHNQERVDEFAKKFCY-VNSKSARKKLVAALFNVPRQALDLLPMYARLVAILDQAMKTIAPLLIEELRSHFR 2871
            +L S LKK TAF KK++ L+E QR AL+ D  +LNL++Y+ E V +V E +LK +DV  AVHLC L HQRYAEFA  L+      F       + E+   + + R++LR + EL   G+F   +G  LI   ++S+ G                    D +T          T V+++  F +  G+D+ G++ RK    +K A E   L   P  +++ + +   ++L+   F +L  HL++ H +L  +E++  +   + G L+E++ +  EE    Y+ LL N  SLA  L+ +MP+LP +   +EE   GI ++  G  G+     G   E E                      + E GK++ EA    D     E   LE+    +A++                         +  E  S  S L L+++    +LPNC N++ +D+ A  FC  +N+KS R+KLV ALF VPRQ LDLLP Y+RLVA L   M  +A  L   L+  FR
Sbjct:  164 RLDSSLKKNTAFVKKLRTLTEQQRDALSNDFGSLNLSKYIGEAVGSVVEAKLKISDVGCAVHLCSLFHQRYAEFAPLLLQAWKRHF----EARKEEKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIYEQLKSIIGT-------------------DRET---------HTHVSVVISFCKHCGDDIAGLVPRK----VKAAREKFGLTFPPSEIINTEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQHEEFATSYQKLLANTQSLADFLDENMPELPLDKTVQEEHGPGIDIFTPGKPGE-YDLEGGIWEDEDARNFYENMVDLKAFVPAILFKDNEKGKDKEEAAEAKDVAATTEELELELEALDIADDPLELDGSDEAENEAELAKKLLDEQEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKSNRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVADDLCSILKGDFR 643
[Close]
BLAST of mRNA_Ecto-sp13_S_contig62.16917.1 vs. uniprot
Match: UPI00147751D2 (regulator of nonsense transcripts 2 isoform X6 n=1 Tax=Esox lucius TaxID=8010 RepID=UPI00147751D2)

HSP 1 Score: 197 bits (500), Expect = 7.110e-48
Identity = 161/519 (31.02%), Postives = 250/519 (48.17%), Query Frame = 1 
Query: 1363 KLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDAVAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAIFLSAPSGEEREEKELLRRKRSNLRLLTELHASGVF---DGSRLIVRIVRSLCGLEGKDGKRQRPGPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTAGMLKLAGEMGKLEREP--VVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRLEKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQLPEHEAEEEGSG-GISLWEGGVGGDGTGYTGPFEESEXXXXXXXXXXXXXXXXXXXXXXEGEGGKEEAEAEXXXDKTLVEEMKRLEV------VAEEGEXXXXXXXXXXXXXXXXXXXXXXGEGGEYMSRNSRLMLMLE---DELPNCHNQERVDEFAKKFCY-VNSKSARKKLVAALFNVPRQALDLLPMYARLVAILDQAMKTIAPLLIEELRSHFR 2871
            +L S LKK TAF KK++ L+E QR AL+ D  +LNL++Y+ E V +V E +LK +DV  AVHLC L HQRYAEFA  L+      F       + E+   + + R++LR + EL   G+F   +G  LI   ++S+ G                    D +T          T V+++  F +  G+D+ G++ R+    +K A E   L   P  +++ + +   ++L+   F +L  HL++ H +L  +E++  +   + G L+E++ +  EE    Y+ LL N  SLA  L+ +MP+LP+ +  +E  G GI ++  G  G+     G   E E                      + E GKE+ EA     K      + LE+      +A++                         +  E  S  S L L+++    +LPNC N++ +D+ A  FC  +N+KS R+KLV ALF VPRQ LDLLP Y+RLVA L   M  +A  L   L+  FR
Sbjct:  166 RLDSSLKKNTAFVKKLRTLTEQQRDALSNDFSSLNLSKYIGEAVGSVVEAKLKISDVGCAVHLCSLFHQRYAEFAPLLLQAWKRHF----EARKEEKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIYEQLKSIIGT-------------------DRET---------HTHVSVVISFCKHCGDDIAGLVPRR----VKAAREKFGLTFPPSEIINTEKQQPFQNLLREYFTSLTKHLKKDHRELQNIERQNRRILHSKGELSEDRHKQYEEFATSYQKLLANTQSLADLLDENMPELPQDKTVQEEHGPGIDIFTPGKPGE-YDLEGGIWEDEDARNFYENMVDLKAFVPAILFKDNEKGKEKEEAAAKEAKDAAATTEELELELEALDIADDPLEMDGPDEAENEAELAKKLLDEQEQEDEEASTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMDFCMNMNTKSNRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVAEDLCSILKGDFR 647
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig62.16917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEF3_ECTSI0.000e+086.44Putative hUPF2 n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
A0A835YRH9_9STRA1.380e-10743.17Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
C3YPG4_BRAFL3.150e-5130.27Uncharacterized protein (Fragment) n=2 Tax=Branchi... [more]
A0A6P4ZV22_BRABE1.150e-4934.09regulator of nonsense transcripts 2-like n=2 Tax=B... [more]
A0A4W5NMR8_9TELE9.030e-4931.53UPF2 regulator of nonsense mediated mRNA decay n=1... [more]
UPI001130AF8C2.880e-4831.33regulator of nonsense transcripts 2-like isoform X... [more]
UPI001878107F2.880e-4831.33regulator of nonsense transcripts 2 isoform X6 n=1... [more]
UPI001C3D3F3A3.030e-4831.33regulator of nonsense transcripts 2-like isoform X... [more]
A0A4W5MTL3_9TELE4.070e-4831.33UPF2 regulator of nonsense mediated mRNA decay n=2... [more]
UPI00147751D27.110e-4831.02regulator of nonsense transcripts 2 isoform X6 n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig62contigEcto-sp13_S_contig62:34191..45106 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score992.6
Seed ortholog evalue1.2e-286
Seed eggNOG ortholog2880.D8LEF3
Preferred nameUPF2
Model size2871
KEGG koko:K14327
KEGG Pathwayko03013,ko03015,map03013,map03015
KEGG ModuleM00430
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000288,GO:0000291,GO:0000956,GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005844,GO:0006139,GO:0006259,GO:0006310,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0007267,GO:0007268,GO:0007274,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009314,GO:0009416,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009628,GO:0009648,GO:0009719,GO:0009725,GO:0009751,GO:0009753,GO:0009755,GO:0009863,GO:0009867,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0014070,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019899,GO:0023052,GO:0031503,GO:0031974,GO:0031981,GO:0032870,GO:0032991,GO:0033036,GO:0034427,GO:0034613,GO:0034641,GO:0034655,GO:0035145,GO:0035690,GO:0035770,GO:0036464,GO:0042162,GO:0042221,GO:0042493,GO:0042742,GO:0042886,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043928,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046483,GO:0046677,GO:0046700,GO:0046907,GO:0048519,GO:0048571,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070478,GO:0070727,GO:0070887,GO:0071166,GO:0071229,GO:0071236,GO:0071310,GO:0071395,GO:0071407,GO:0071426,GO:0071427,GO:0071446,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0090304,GO:0097159,GO:0098542,GO:0098916,GO:0099536,GO:0099537,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901700,GO:1901701,GO:1990904
Exons15
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
EggNOG OGsKOG2051@1,KOG2051@2759
Cds size2871
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463863.4669049-CDS-Ecto-sp13_S_contig62:34190..349911681463863.4669049-CDS-Ecto-sp13_S_contig62:34190..34991Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 34191..34991 +
1681463863.4799693-CDS-Ecto-sp13_S_contig62:35416..355841681463863.4799693-CDS-Ecto-sp13_S_contig62:35416..35584Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 35417..35584 +
1681463863.4900224-CDS-Ecto-sp13_S_contig62:36176..364041681463863.4900224-CDS-Ecto-sp13_S_contig62:36176..36404Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 36177..36404 +
1681463863.5024652-CDS-Ecto-sp13_S_contig62:37199..372911681463863.5024652-CDS-Ecto-sp13_S_contig62:37199..37291Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 37200..37291 +
1681463863.5147245-CDS-Ecto-sp13_S_contig62:37625..379071681463863.5147245-CDS-Ecto-sp13_S_contig62:37625..37907Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 37626..37907 +
1681463863.527046-CDS-Ecto-sp13_S_contig62:38464..385661681463863.527046-CDS-Ecto-sp13_S_contig62:38464..38566Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 38465..38566 +
1681463863.5427046-CDS-Ecto-sp13_S_contig62:39050..391641681463863.5427046-CDS-Ecto-sp13_S_contig62:39050..39164Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 39051..39164 +
1681463863.563974-CDS-Ecto-sp13_S_contig62:39436..395631681463863.563974-CDS-Ecto-sp13_S_contig62:39436..39563Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 39437..39563 +
1681463863.5819068-CDS-Ecto-sp13_S_contig62:39961..400741681463863.5819068-CDS-Ecto-sp13_S_contig62:39961..40074Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 39962..40074 +
1681463863.5936007-CDS-Ecto-sp13_S_contig62:40544..407511681463863.5936007-CDS-Ecto-sp13_S_contig62:40544..40751Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 40545..40751 +
1681463863.610281-CDS-Ecto-sp13_S_contig62:41505..416281681463863.610281-CDS-Ecto-sp13_S_contig62:41505..41628Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 41506..41628 +
1681463863.6246347-CDS-Ecto-sp13_S_contig62:42258..424511681463863.6246347-CDS-Ecto-sp13_S_contig62:42258..42451Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 42259..42451 +
1681463863.6377802-CDS-Ecto-sp13_S_contig62:43351..434921681463863.6377802-CDS-Ecto-sp13_S_contig62:43351..43492Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 43352..43492 +
1681463863.6591606-CDS-Ecto-sp13_S_contig62:44149..442751681463863.6591606-CDS-Ecto-sp13_S_contig62:44149..44275Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 44150..44275 +
1681463863.6718636-CDS-Ecto-sp13_S_contig62:45052..451061681463863.6718636-CDS-Ecto-sp13_S_contig62:45052..45106Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig62 45053..45106 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig62.16917.1prot_Ecto-sp13_S_contig62.16917.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig62 34191..45106 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig62.16917.1

>prot_Ecto-sp13_S_contig62.16917.1 ID=prot_Ecto-sp13_S_contig62.16917.1|Name=mRNA_Ecto-sp13_S_contig62.16917.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=957bp
MSSSGGGEGRSRGGGKGRGGGGGRGGGGGEGASAAGSSSSRGRGSKSSRG
SRSNRTSKPASSTPSTTEATAAAATARPPPPPPPQSGTATADAAAAGERD
DGLVPGAGLLALQALAPAQKKSKADPKTPTAVPAPQPSAAPTPKDRAGGS
ASGGGGSRSTGRGVKAAGGRDTGGKTAATTATQQERSGKALGGANSTAAG
RERAAAASTTTSGRRNFAAAAAAAAKGTLSSSARGGKPEKDGATSGGRGG
GGRKPSGKGTGARQLSEEEERERSREAAKQLAAQKEARKKAEEERRRKAE
EDRKAAEEQRARREAEEKERKLKAEAEARRKDIEDKKAAEVKRKAEEKKR
KAEEARRKAADEARKAKEEAERKAREERKAAERAEREAAKAAEEERRQKE
EEQERVRREFEAQLEAVSQLDLLQKEERARRELREKHTPEALKASRDAHE
ANKPKLKSDLKKTTAFTKKVKALSEDQRSALTKDVETLNLNRYVSEVVDA
VAENRLKNADVSVAVHLCCLMHQRYAEFAEDLIPKLAAIFLSAPSGEERE
EKELLRRKRSNLRLLTELHASGVFDGSRLIVRIVRSLCGLEGKDGKRQRP
GPGDAARRRDHQTVTAAPPPLRETDVTLLAGFVRAAGEDMVGVLQRKTAG
MLKLAGEMGKLEREPVVDADVKGRLRSLVDGVFDALCSHLERGHEQLGRL
EKKMEKDRLTNGTLTEEKERNLEESRKGYEALLGNVTSLASSLNRDMPQL
PEHEAEEEGSGGISLWEGGVGGDGTGYTGPFEESEREEERRLQKERSAAD
AGDAGDAEGEGGKEEAEAEEEEDKTLVEEMKRLEVVAEEGEEEGAGTDDE
EEEGEEEEEEEEEGEGGEYMSRNSRLMLMLEDELPNCHNQERVDEFAKKF
CYVNSKSARKKLVAALFNVPRQALDLLPMYARLVAILDQAMKTIAPLLIE
ELRSHFR
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mRNA from alignment at Ecto-sp13_S_contig62:34191..45106+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig62.16917.1 ID=mRNA_Ecto-sp13_S_contig62.16917.1|Name=mRNA_Ecto-sp13_S_contig62.16917.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10916bp|location=Sequence derived from alignment at Ecto-sp13_S_contig62:34191..45106+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCTCATCGGGTGGAGGAGAAGGCAGAAGCCGAGGAGGGGGGAAAGG
AAGAGGCGGAGGAGGAGGACGAGGAGGAGGAGGAGGAGAAGGCGCCAGCG
CCGCCGGGAGTAGCAGCAGCCGAGGGCGAGGTAGCAAATCATCTCGGGGC
AGCCGAAGCAACCGAACCTCGAAGCCCGCATCTTCGACTCCCTCAACGAC
TGAAGCGACGGCTGCGGCCGCCACCGCTCGGCCGCCACCGCCGCCACCAC
CACAGTCGGGAACGGCCACCGCGGACGCCGCCGCCGCCGGCGAGCGAGAT
GACGGCCTTGTGCCCGGCGCGGGCCTCCTGGCTCTCCAAGCCCTGGCCCC
AGCGCAGAAAAAGTCCAAAGCAGACCCGAAAACGCCCACGGCGGTGCCGG
CGCCACAACCAAGCGCGGCGCCAACCCCCAAAGATCGAGCGGGTGGCAGT
GCCAGCGGGGGCGGAGGCAGTCGCAGTACCGGTCGCGGGGTAAAGGCCGC
AGGCGGGCGGGACACCGGCGGCAAGACAGCAGCGACGACGGCGACGCAGC
AAGAGAGGTCGGGCAAGGCTCTCGGTGGTGCTAATAGCACGGCCGCCGGC
CGCGAGAGGGCGGCGGCGGCGTCAACGACGACGAGTGGCCGGCGAAATTT
CGCGGCAGCCGCGGCGGCCGCGGCCAAGGGGACGTTGTCGTCAAGCGCGC
GCGGGGGCAAGCCGGAGAAAGATGGGGCTACCAGCGGTGGTCGAGGAGGG
GGCGGGAGGAAACCCTCCGGCAAGGGCACCGGCGCACGGCAGCTCTCCGA
GGTGATGACGATCGATACATAGCGGTGACGGAGGCGTGTGCTCGCCTTCG
TGTGCACTGTGGACCTCTGATCCAATCGAGGGGTTTTGTTTGGGCTCTGA
GGAGCCCTCTTTGTTATTCTCCTTACCTCATATGTGAGGGCGTTGGTTGA
CACACGACACGGTTCTTCATTTGTTCAGGACTGACCTCGACGAGGCATCC
ATCGTCGACGTCGTTATGGAAGGAGAGGCCCACCCGGCCAACCTTGCGAC
TTGACACTCTTCACGGCTGCTATCGCGTAGTCTCGTGGTATGTTTCAAAC
ACTCACGTGGCTATGCGGACGCGCTGAAAGATATTCCCACTACTGTACCT
GCCTTGCAGCTGATAACAGGCTTCCCACGCTCGTCTCTAAACCACCCCCA
CCGCTTACCCTGCCTTGGAAATGAAGGAGGAAGAGCGAGAGAGGTCGCGA
GAGGCGGCGAAGCAGCTTGCCGCTCAGAAGGAGGCACGAAAGAAGGCCGA
GGAAGAGCGCCGGCGGAAGGCGGAGGAAGACCGGAAGGCGGCCGAAGAGC
AGCGCGCTCGGCGGGAGGCCGAGGAGAAAGAGCGGAAACTCAAGGTGACG
ATGTTGTGTGCATGTGTAGCGATCCACTCTCGAACTCGCGGTGCCCCCAC
ACGTCGTCGACAAGGCCGCCTTCGCCTATTTAGCTGGTATGTGCAAGTGT
ATCCGTCACTTTGCTGCATCGGGTTGTGCGTAGATTGCAGGGAACGATTA
GATAAACACCTGGGGATCGGTGCAGGTGAAGAGTGGTTCCAGTCCATCGG
CTTGTCCGCGAAGCCGATGCTTTGGACAACAAGCAGAGCCAGTGCCAGCG
GGAAACGATCGCTCGCCATTCAAGCCCCAATCCGCCCCCCAAACGGCTGG
CGAGGGGACCCCGCCGGAGGCAAATCAGTCGGGTGTGTTGGCTTCGTTGC
GCATCGAAACCGGCCTTAACTACAACCGCAAACGTCATGTTGCGAATGTA
TGGTGGCGATGAACCACTTTTGAAGCGTTGGTTGCGACATTCTTCATGCA
CGCAACAAGAACATGAATATCCTCTGTTGTACGGTAGCATATTTTTACTG
TCGACATCCCCCGCCAGCTAGGCCGCGGACAGCACCCCCCCCCCCCTCAA
CCTAACCCTAATACGATACGTCGTTTTTCAACCCAGGCCGAGGCCGAGGC
GCGCAGGAAAGACATCGAGGACAAGAAAGCCGCGGAGGTCAAGCGGAAGG
CGGAGGAGAAGAAGAGGAAGGCGGAAGAGGCGCGGCGGAAGGCCGCGGAC
GAGGCCCGGAAGGCTAAGGAGGAGGCCGAACGGAAGGCTAGGGAAGAGCG
AAAGGCGGCCGAGAGGGCGGAGAGGGAGGCCGCAAAGGCGGCGGAGGAGG
AGCGGCGGCAGAAGGTCAGGAAGGCGTTTTTCAGATTGCGGAGGGTGCTT
TTAGATTAATCAGCGGTGACATGAAAGAGGGAGGGGGTGCAAGGTAGCAC
TGTGGTTTGTTACGAGTGGCCGGGGTTTGCCGTGGGCCTCAACGGCTGTC
GTGGACAGGGTAGAGGACGAGGGGGTATTGGTAAGGGGGAATCAAGGGGG
GGTCGCGGATGTTTCTGCGCGCCGCAACACGCGGCTCGTTGTGTGAGTTC
ATTTTGACCGTCCGTGTGCCGTGAGGGTATAGTGGTGTCAACCATGGTAA
GGTCAACGCGCTGAACACGATGGGGCTTCTTGATTTTGTCGATCGTTTTG
TTTTCGAATTGGAAACTGAAACAAACATGCAGCAGTGGTCACGTGGACAA
GACCCAACGGTACAGCAGTTAGTTTGGGTGGTGAGAACACCAGCAACGAT
ACCTAGGTAATTCCTACTCAATTGCTCCCAGCTCAAACGAATGAAACTTC
TTCTGTGTTGGAAGGATATACCCGATGGACCAAGATTTTGCCGAGTGTTC
TGAACTTCCTGCGATTACAAGTGTTCAACACATGGCCATAAAATGTCATC
ACTTTGGTCGTTTGTCGAACCTTAATCGTGGTGACACCTCGTTGTTGTTG
GTTGCCACACCCGTTCGAACGCGAGTGGATACATCAGCCTGTCCGATCGT
CGCTGCAAGCCACTTCATAGTCCTCGCCCTCGTCAGACGGAAGGGCGGGC
TTGCTGAGTTGTCCTTCGCCGGTTCGTTTGTGTATGTATTGTGTTGACTC
AACCACCAGGAGGAGGAACAGGAGCGCGTGAGGCGGGAGTTCGAGGCCCA
GCTGGAGGCGGTGTCCCAGCTAGACTTGCTGCAGAAGGAGGAACGAGCCA
GGTGAGGCGATAGCTTGGTGATACATACCTTCCCGCGGTATGGTGGCAAA
TACTGCAGTCCTGTTTTTTTTTTTTTGAGCCTGTAACGCGGTGTCGCCGC
GGTCATGCCGCCGAAGAGTCGCAACCGTCCGGATGGTGGCGAACCGCGAT
ACTGTGCGTCGTGACGAAAAGAGCGGCGTGATGCAATGGGTCTCTACAGC
TGCACCCCCCCCACACCCCGCCTGCCATTTCCGCCGCATCCTCAAAGAGG
CTGGTGATTTTCTCGCCCCTCGGATTCTACTCTGTCGCAAACCCCCCCTC
CCTCGCCGTTCGGTAAAAAACCCGGACGCTCACAGACGGGAGCTGCGGGA
GAAGCACACGCCGGAGGCGCTGAAGGCGTCGAGGGACGCCCACGAGGCCA
ACAAGCCCAAGCTTAAGTCCGACCTCAAGAAGACCACCGCCTTCACGAAG
AAGGTCAAGGCCCTGTCAGAGGACCAGAGGTCTGCTCTTACCAAGGACGT
GGAGACGCTCAACCTTAACCGTTACGTGAGCGAGGTGGTCGACGCCGTGG
CGGAGAACAGGCTCAAGAACGCCGACGTTTCGGTGGCGGTGCACCTGTGC
TGCCTCATGCACCAGAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTT
TTGATTAGTAACATCGACCGCGCTAAACGGTTGGCCAATGAAAAGACGTC
AGTCTCAGTGCGGGTGAAAACCAGCAACACTTGTAAATTCCATGCGTGCG
TGTGTGTGTGTGTTTTGGGATTGGCGTCATGGACCGCGCTGACCACTGAA
AATAAGTCAGTCTTTGTGGCGTGCACACATGCTGCCTCATGCACCAGACG
TGTGTATGTGTATGTGTGTGTGTGTTTGGCATCGACCGCGCTACTTTAGC
CAATGAAAAGCCATCAGGCTTCCAGTAGCAGGATAGGGTGCAGGCTTGGG
GGGCATGGTGCACTACTGGTCAAGATGTCAGCAGTGTTGCACCTTGCTTG
CCTCGGTTGAACCAGACGTTCCAAGGCGTTGCACGACAGTCGGACAGGCA
TGTTTCTGTCGCTCTTTACGCCCTTCCTACGCGTCAGGCGTACCTTGTGC
AGCTTGGACCCTCTTTTCCTTGACCCCGTGCGCGCCCCTCATGCCCCTCG
TGCTCCTGCGTGTGTTTCTCGAAGGTACGCCGAGTTTGCTGAGGACCTGA
TCCCGAAGCTGGCGGCTATCTTTCTGTCGGCCCCGAGCGGGGAAGAGCGG
GAAGAGAAAGAGCTCCTTCGGCGAAAGTGCGCACGTTTTTGTAGGGGGAG
AGATTGGTGTTCTGCATTTTTTGTAGCAGAGAATCGACGAGGAACCAGGA
AAAAGTAGCTGGGGCCCCGACATGTTGCAGTGTTGTCTTGAGTGCATCCA
GTACCGCCATGCGATGTACATGTATTCGGGAGAGCGCGGAACATGCGGAC
GTCCCCTTTGGCGGAACTGGCGGCCTGGAGGCATGTATGCACTCATAGCT
GCGAACCCTGAACCGGCTTGTTCGTTCGGTCTGATCGTCTGTTCGCACCA
GCGCCATCCCTATGATCTAGCCACTCACTTTTCAGGCCTTGTGTTTTCTC
GCACGTACAAGCATGTCGGAATTATTCCGTTGGTGTTGTCGATGGTGCTG
TGCTGCTATTGCCGCCGCCGCTGCTGCTTTTGCCGCTGTTGCTGCTTATG
CTATCGCTACCGCTTTATCCGTCCCCATGACACACATGTGGTCCCACGTC
CCCGAGGCAGGAGGTCGAACCTACGGCTGTTGACGGAGTTGCACGCTTCG
GGCGTTTTCGACGGAAGCCGCCTCATCGTAAGGATCGTCCGCTCTCTGTG
CGGCCTGGAGGGCAAGGACGGAAAGTGAGTACCAGCAGCACAGCAATGCG
ATCTTCCTTCGCAAACACACCCCGCTCACCCCGCTTTCGTCTTGTTGCAA
CCTCATCATGAAGTGCAGTACCAGTCAGAGCACACCCTTCCCCCGTTTTG
TACAGCGAGTGCCTCCTCCTACGCCGTCCATACCCCCTGTGATGGACAGC
TTGGCATGATTCTATAGGCGTCGTATAGCACACACCCCTTACCAATGCCA
GCGACAACATCAACGATAACAAGGACGTTGTTCCTTTTTTTTTCAGGCGG
CAGCGGCCAGGTCCGGGTGATGCTGCCAGGCGGCGCGACCACCAGACCGT
CACCGCGGCGCCGCCCCCCTTGCGGGAGACTGATGTCACCCTCCTCGCTG
GCTTTGTCCGGGCGGCCGGAGAGGTAACAGTGTAGTGTACTTGGAAGCAT
GATACAGTGTTTTTGAAATATTCTCGAGGGAAGCGGGGTCATGCTCTACC
TAGCGGTTTTTTTTCAGGGTGGCTGGAGAGGTGGGTGGTTAAAACATTCG
CGGGTGGGGGAGGAGGCGCAGGGTTTTAATGATAATCATGGCGTTTCGGC
TGAGGGTGGCAGAGTGGTGGGTAATCGAAGCATTTTTAAGGGGATAAAGG
GGTAAAGAGGCGGGGGGGTTCAGGTTGTACGTGTCGTTTTTGTTGAGGGT
GGCTGGTCCGGCAACGTCGTTCTCGTATCGCTTGTCTGCGTTCAGGGGGT
CTACTGTCGTCTCGGGTTTGACTGACCGGTACCAAACTTGTTCTGTGATT
GTTTGCGCTGTTGGTGATAAGGACATGGTCGGAGTTTTGCAGCGCAAGAC
GGCCGGCATGCTAAAGCTGGCGGGGGAGATGGGCAAGCTTGAACGGGAAC
CGGTGGTCGATGCGGACGTCAAGGGGCGCCTAAGGTTTTTTAACCGCTTC
ATTATCACCGCTGTTAATACCATTGCCATGGGTTGCATACGTGAGACATC
ACACCCCTTGGGATCGATTTTCAGGGCTCATTGCTTTGCAGCAGTATCAG
TGACGGTGCCGATAGTGGCGGCGTTGGAACCGTCTTGTCGAGTGCTTTGC
GAAAATGCGTAATTTGACTGTGGCATCCTCTTCGTCATGGAGTTATCGAG
CTTTGAAAAATTGATCCATGCGGTATGATGTCCTACGCAGCCAACGGCAT
AAGGCTGCTGATCTGAATTTACTTTTTATGGCATTGTCGTGACTGCTACT
GTTACGTTGTTGCTTTTGCCCCTTTCCCTACGCACTTGGCGCGGGTATGT
TGGAAATCCTACGGTTCGTGTGTTGCTCACGAGCCCACCCCCCTCCCGTA
CACTCTTACTCCCCTCCTCCCCGTCTCTGAAACGCCTCTTTGCTGGAAAC
TCAGGTCCCTCGTGGACGGAGTTTTCGACGCGCTTTGCTCTCACCTGGAG
CGGGGTCACGAGCAGCTTGGGCGCTTGGAAAAGAAGATGGAGAAGGACCG
CCTGACGAACGGCACCCTGACGGAGGAGAAGGAGAGAAACTTGGAGGAGA
GTCGGAAGGGCTACGAGGCGTTGCTGGGAAACGTTACCTCCCTGGCGTCT
TCTCTCAACAGGTACTGTTCGTTTGGTGTCTGTCTTTTTTTTTTTTTACC
CTTTCGATCGGCCTTACAAATGCCGGCGTTGTGGTGTAGTGGGGGCGGAG
TGGGCGTCTACTTGCTGTTGGTGTTAGCAGTTTGCAGGGGACTTGAGTGT
CGCGGTGTGGGGTTCCGTGTATACCTGGCCCGAATATGCGACACGGTACA
TACTGGTCACAGCTGACGGTGGTTGATTTACTTGCGGACGATCACCAGCA
TGTAGCGGTGGTATTTGGGTTGTACCGAATAGGTGTAGGGGTAGGGGTGT
AGGTCGAAGTCGCAAGACCGTGAGTTGGGGCACATGTGTCTTCAGCCAGA
GCAACGCCTGCCGAGTTAACCCCGACGAACCACGTTTACCGAAACCCCCA
AGGTTGCGGCGAAAAAAACACAGAAGCCGGGGCTCGGTCGAAAACCCTTC
CATGCTGGTATAGACGTAGTTTTTGTCAGGTTGATGGAGGCTTCGGTCGA
ACGGTATGAGAACGTCGCGGCAGCGGCATCGGGTATGCTTTTACTATCGG
TGCGGACAGCGAGTGGAGTTCATCTCGGGGAGAATGATACGCTACGCGAG
AGGGTGTTCCTAGCATGTTTGGAGGCGTGTGTCCGTTTCGTCCTCTTCCC
GTGTGGTGGTGCTCACGGCAGTCTAGACTCGGTCCCTGTACACCGTGGCC
ACAACCCGGCGCCACGAGGAAGACTTGGGCGTTTTTTTTCTCGTTGTTGT
TATATTCGTCTCCAGGGACATGCCGCAATTACCCGAGCACGAAGCGGAGG
AGGAGGGTTCCGGAGGCATCAGCCTGTGGGAGGGCGGCGTGGGCGGAGAC
GGCACGGGCTACACCGGGCCGTTCGAGGAGTCGGAGAGGTGAGGGGGGGT
ACGCGCGCGCGCGCCCCGGGGGGGAAGGTGCCTGTGTTGCCTGCCTCACT
TTGTTGGGTGGTCTTGTTTAGTCTCCCCGTGGTGTTGAGCTGTGCTGTGT
GAGTCAAATAAATGTTCACGGGTCGGAGATGTGAGGGAGTATGCACGCGC
ACGCGCCAGGGGGGGGGGCGGGGGGACTCTTGTGCGCCCCTCCTGTGTTG
CGTGCATTACTTTGCTGGAGAGCCTTGTTTAGTCCCCTTGGTGCTGAGCT
TGTGAATCAACTGTCCTCGAGCTTGTGATACAGTAGATAGTATCGTAGTT
TTGGAGCTTGTCGTTACGTATTTCCATGGCATTCGAGCTCATCATACCGC
ACAACCATGGTCGTCGAGCTTGTCATACCATTTACCCAGGCCTTCCAGCT
TGCCACGTCGTGTAACCATGGCGTTCTCACCATGCCCAGTCTCTCATCGT
CCCTTCCTGCGCAGCACGTACTGCCACGAGTAAATCGCGCCACCCGGCTT
TCGCCCCCTCCACCCCACCCGCTACACCCAGGTCCTTCTACGAAGATCTC
CCGGATCTTCTCAGTACCGTGCCCCCGAACCTTTTGGGCCTGACGGAGGA
GCAGGCGGAGCAGCTCAGGGAGGAGGAGAGGAGGCTGCAGAAGGAGAGGA
GCGCCGCCGACGCCGGTGATGCCGGTGATGCCGAAGGTGAGGGAGGAAAA
GAAGAAGCGGAGGCGGAAGAGGAGGAGGACAAGACGCTCGTCGAGGAGAT
GAAGCGGCTTGAGGTGGTGGCGGAGGAGGGAGAGGAAGAGGGGGCGGGTA
CCGATGATGAGGTGAGAAAGCACTCTTGTTTACTCCCCCCGGCCGCTCGA
GAATACGTTGTCAATGGTCCAACAGCAAACGCATGTAAAACATGAGTACG
CCCCCCACAGGGGGGGATAGCTGTACTGGGGCATAGGAAGTGGGTTGAAA
CGGTGGGAAGAGATATTGACAGGATAGATGGTATAGGGAAATCGTTTTCG
AGCCACCTTTGACAAAGTAGGAAGAAACGAATGGCTACCGGTGATCGGTC
CCGTGGGAACAATGCTCCGTCCCCTCGAGGACGCGTGGTCAATGGTCCAA
CAGCTAAAACATTATTAAAAAAATGAGTACGCCGCCCCTTGCCCCCCCCT
GGGGGGGTCCGTAGGATGGTATATCTTTGCCCCCTCGGCGGGCGGGAGCA
CACTGCGAAGCCCCATCTTTTGGGGACCCCTCGTACCGGAGGCAACAGCA
CGAGGCCGTGCGAACAGAGCACTCTGCTTCGGGAATGCCTCTTATTGTTG
ATTGGCTCATCGGGGCTGTAGGTCTCTAGCTCTTCTCACTAGCGGTCAAA
AGAGCTCTGTTAGTGTCCTCCATACTCAGCTATTTTGCTGGGTTAAATGC
ACTCGCGGCATGCTTGCAACGTGGATTCGAAGCAGTGTATACCCACAGAC
TTTTACTCTCACGCGAGGATGGTTACAACATGTAGCTGTTCAGCGTGCTT
CCGACAGTGTTGCTGTGTCTTGCGGTGTTTTTTCGTTTTTTCCGCGTTCG
TTGAAACTTGTGTTTCTTCACGGCAGCAACATTGGTCTCAGCATCTCCCC
GCACCTTAGATTGTATCGTTTGGCGGCATTCTCCGGGTAGACCTTCGAAG
CGTCTCGCTGTCTACGCGCTGGCAACCGTGGCTGATGTAACCATGGTTGT
GGCTTCTGCAGGAAGAAGAAGGGGAAGAGGAGGAGGAGGAGGAGGAGGAG
GGAGAAGGCGGCGAGTACATGAGCCGCAACTCGCGGCTGATGCTCATGCT
GGAAGACGAGCTGCCGAACTGCCACAACCAGGAGAGGGTGGACGAGTTTG
CGGTGAGACAAGACGAGACAAGAGATAGACAAGGCACCCGTGATGTTTTT
TTCGCGCGGTTTTGGTTGGAACGGATTGGATCAAGATTGGGATTGGTTGA
TTTCAGCTTCGAGAACCGTTGTGCTTGGATTGGTTTGGATTTGGTTTGGT
TGGTTCCAAGACAGGCATTTTTTTGTGAGGTCGACATTGACGTTGACATC
GTGAGATAGCTTTTTCTTCTACCGCATGGCACGTGTTTTTGTTGGAGGTC
GTGGGTGTGGTGACCGTGGTATGGCTGGTGTGTGCTGTAATAGTCGCTGC
CTATGCGCCCTCGTTTTTTCTCGTCCTGACACTCTGTTATCTGGTTTCTT
CCCGTAGAGTCGGTGCGAATGGGGATTTACTGTGATTTACTGTGACTTGC
TTGACATTATTTCACGAGCTTACGATTTTCTCCACACACTGCTTCAAATT
GACTGCGACAACACTCACCATCCGATCCAATCTTTAGGTGCATGTATCTA
CACTGATTCGTTGTACGGCATTGCCGATGTGCTTCTATGGTATTGAGTCG
TCGTACAATATAGGGAGTACGATACATCCCATGCCTTTTATTTTTTTTAA
TGGCTCGGTCGCCCGTCCGCCTCCTGTTTCCGTCCGACCGGCCTCTCGTG
GGCGAGCAGAAGAAGTTCTGCTACGTCAACAGCAAGTCGGCGAGAAAGAA
GCTAGTGGCGGCGCTGTTCAACGTGCCAAGACAGGCACTAGACCTGTTGC
CCATGTACGCTAGGCTGGTTGCCATCCTCGACCAGGTGTGTCGGGGAGGA
GCGGGATCAGAAAACAAAAAAATGACAAAAAAAACAAGAAAGTCCCTGTG
TCGGACCTCCTGTTTCAGATGAAACTCGATTTGGGCGGGGGTGTAGTTTC
CTTGGACATGCTGGCGACTGGTACACCCCAACCTTCCTGCCGTGTGACCC
CGGCTCGTGCTTCAAATATTGACCGAATAGATGGGGGCGAAACACAAAAA
TGTACTCTGAGCATGGGTGAATATCGTAGCCATGGGATGGCAAACACCAT
TACTTGCGTCCTTTGTCTCGCCGTCGGTTTACCACGTCAATGGTGTTTCT
ATTACCCACACGGCAGTATGATGCATACACTACAGAGTGTAGCAACTACA
CTATTCTTTTTTTCTGTTTGAAACGGTTTTCGGCATCATTCCTACAGAAA
GTGAGGCCTTTCTCCGCGTTGTGCGCAATGAAGAGAACGTACAGCTTCTG
GTGTTTTTTTTTAGTTCGGGGCGTTGGCATTCGAAAATTGTCGCCATTGG
GAAGGCAGTAGAACGAAACCTGGTACTGTTGGTATTTTTCATTTTTTGAA
GTACATGTTTCTTTCTCACTCGAAAATGCTTCCTGTTTCGACAACAATTG
AGGACGATATTACGGGGCACTCCCGAAGACTGCATTTATCGTCGGATCCA
GGGATGTACAAGTAGCTTGAGGGCTTAACCTTAACCTTTGGTGTAAGCCA
CCCTGCTTGCAACAAACAATGCTCCCTCCCCTTTTTTTTCTGCGCGCCCT
CTCGCTCCGCAGGCTATGAAGACAATCGCGCCCCTTCTCATCGAAGAGCT
GAGGAGCCACTTCAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig62:34191..45106+

>mRNA_Ecto-sp13_S_contig62.16917.1 ID=mRNA_Ecto-sp13_S_contig62.16917.1|Name=mRNA_Ecto-sp13_S_contig62.16917.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2871bp|location=Sequence derived from alignment at Ecto-sp13_S_contig62:34191..45106+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCTCATCGGGTGGAGGAGAAGGCAGAAGCCGAGGAGGGGGGAAAGG
AAGAGGCGGAGGAGGAGGACGAGGAGGAGGAGGAGGAGAAGGCGCCAGCG
CCGCCGGGAGTAGCAGCAGCCGAGGGCGAGGTAGCAAATCATCTCGGGGC
AGCCGAAGCAACCGAACCTCGAAGCCCGCATCTTCGACTCCCTCAACGAC
TGAAGCGACGGCTGCGGCCGCCACCGCTCGGCCGCCACCGCCGCCACCAC
CACAGTCGGGAACGGCCACCGCGGACGCCGCCGCCGCCGGCGAGCGAGAT
GACGGCCTTGTGCCCGGCGCGGGCCTCCTGGCTCTCCAAGCCCTGGCCCC
AGCGCAGAAAAAGTCCAAAGCAGACCCGAAAACGCCCACGGCGGTGCCGG
CGCCACAACCAAGCGCGGCGCCAACCCCCAAAGATCGAGCGGGTGGCAGT
GCCAGCGGGGGCGGAGGCAGTCGCAGTACCGGTCGCGGGGTAAAGGCCGC
AGGCGGGCGGGACACCGGCGGCAAGACAGCAGCGACGACGGCGACGCAGC
AAGAGAGGTCGGGCAAGGCTCTCGGTGGTGCTAATAGCACGGCCGCCGGC
CGCGAGAGGGCGGCGGCGGCGTCAACGACGACGAGTGGCCGGCGAAATTT
CGCGGCAGCCGCGGCGGCCGCGGCCAAGGGGACGTTGTCGTCAAGCGCGC
GCGGGGGCAAGCCGGAGAAAGATGGGGCTACCAGCGGTGGTCGAGGAGGG
GGCGGGAGGAAACCCTCCGGCAAGGGCACCGGCGCACGGCAGCTCTCCGA
GGAGGAAGAGCGAGAGAGGTCGCGAGAGGCGGCGAAGCAGCTTGCCGCTC
AGAAGGAGGCACGAAAGAAGGCCGAGGAAGAGCGCCGGCGGAAGGCGGAG
GAAGACCGGAAGGCGGCCGAAGAGCAGCGCGCTCGGCGGGAGGCCGAGGA
GAAAGAGCGGAAACTCAAGGCCGAGGCCGAGGCGCGCAGGAAAGACATCG
AGGACAAGAAAGCCGCGGAGGTCAAGCGGAAGGCGGAGGAGAAGAAGAGG
AAGGCGGAAGAGGCGCGGCGGAAGGCCGCGGACGAGGCCCGGAAGGCTAA
GGAGGAGGCCGAACGGAAGGCTAGGGAAGAGCGAAAGGCGGCCGAGAGGG
CGGAGAGGGAGGCCGCAAAGGCGGCGGAGGAGGAGCGGCGGCAGAAGGAG
GAGGAACAGGAGCGCGTGAGGCGGGAGTTCGAGGCCCAGCTGGAGGCGGT
GTCCCAGCTAGACTTGCTGCAGAAGGAGGAACGAGCCAGACGGGAGCTGC
GGGAGAAGCACACGCCGGAGGCGCTGAAGGCGTCGAGGGACGCCCACGAG
GCCAACAAGCCCAAGCTTAAGTCCGACCTCAAGAAGACCACCGCCTTCAC
GAAGAAGGTCAAGGCCCTGTCAGAGGACCAGAGGTCTGCTCTTACCAAGG
ACGTGGAGACGCTCAACCTTAACCGTTACGTGAGCGAGGTGGTCGACGCC
GTGGCGGAGAACAGGCTCAAGAACGCCGACGTTTCGGTGGCGGTGCACCT
GTGCTGCCTCATGCACCAGAGGTACGCCGAGTTTGCTGAGGACCTGATCC
CGAAGCTGGCGGCTATCTTTCTGTCGGCCCCGAGCGGGGAAGAGCGGGAA
GAGAAAGAGCTCCTTCGGCGAAAGAGGTCGAACCTACGGCTGTTGACGGA
GTTGCACGCTTCGGGCGTTTTCGACGGAAGCCGCCTCATCGTAAGGATCG
TCCGCTCTCTGTGCGGCCTGGAGGGCAAGGACGGAAAGCGGCAGCGGCCA
GGTCCGGGTGATGCTGCCAGGCGGCGCGACCACCAGACCGTCACCGCGGC
GCCGCCCCCCTTGCGGGAGACTGATGTCACCCTCCTCGCTGGCTTTGTCC
GGGCGGCCGGAGAGGACATGGTCGGAGTTTTGCAGCGCAAGACGGCCGGC
ATGCTAAAGCTGGCGGGGGAGATGGGCAAGCTTGAACGGGAACCGGTGGT
CGATGCGGACGTCAAGGGGCGCCTAAGGTCCCTCGTGGACGGAGTTTTCG
ACGCGCTTTGCTCTCACCTGGAGCGGGGTCACGAGCAGCTTGGGCGCTTG
GAAAAGAAGATGGAGAAGGACCGCCTGACGAACGGCACCCTGACGGAGGA
GAAGGAGAGAAACTTGGAGGAGAGTCGGAAGGGCTACGAGGCGTTGCTGG
GAAACGTTACCTCCCTGGCGTCTTCTCTCAACAGGGACATGCCGCAATTA
CCCGAGCACGAAGCGGAGGAGGAGGGTTCCGGAGGCATCAGCCTGTGGGA
GGGCGGCGTGGGCGGAGACGGCACGGGCTACACCGGGCCGTTCGAGGAGT
CGGAGAGGGAGGAGGAGAGGAGGCTGCAGAAGGAGAGGAGCGCCGCCGAC
GCCGGTGATGCCGGTGATGCCGAAGGTGAGGGAGGAAAAGAAGAAGCGGA
GGCGGAAGAGGAGGAGGACAAGACGCTCGTCGAGGAGATGAAGCGGCTTG
AGGTGGTGGCGGAGGAGGGAGAGGAAGAGGGGGCGGGTACCGATGATGAG
GAAGAAGAAGGGGAAGAGGAGGAGGAGGAGGAGGAGGAGGGAGAAGGCGG
CGAGTACATGAGCCGCAACTCGCGGCTGATGCTCATGCTGGAAGACGAGC
TGCCGAACTGCCACAACCAGGAGAGGGTGGACGAGTTTGCGAAGAAGTTC
TGCTACGTCAACAGCAAGTCGGCGAGAAAGAAGCTAGTGGCGGCGCTGTT
CAACGTGCCAAGACAGGCACTAGACCTGTTGCCCATGTACGCTAGGCTGG
TTGCCATCCTCGACCAGGCTATGAAGACAATCGCGCCCCTTCTCATCGAA
GAGCTGAGGAGCCACTTCAGG
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