mRNA_Ecto-sp13_S_contig6197.16912.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6197.16912.1 vs. uniprot
Match: D7FY31_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY31_ECTSI) HSP 1 Score: 304 bits (778), Expect = 4.070e-96 Identity = 146/150 (97.33%), Postives = 150/150 (100.00%), Query Frame = 1
Query: 1 SWSELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPRDFSLEELRPFDGTSDIPEGHAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSEEDMTVLQDWASKMEKKYPVVGTIANSAP 450
SWSELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPR+FSLEELRPFDGTSDIPEG+AAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLS+EDMTVLQDWASKMEKKYPV+GTIANSAP
Sbjct: 124 SWSELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPREFSLEELRPFDGTSDIPEGYAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSKEDMTVLQDWASKMEKKYPVIGTIANSAP 273
BLAST of mRNA_Ecto-sp13_S_contig6197.16912.1 vs. uniprot
Match: A0A7S2G6E6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G6E6_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.680e-36 Identity = 72/145 (49.66%), Postives = 103/145 (71.03%), Query Frame = 1
Query: 7 SELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPRDFSLEELRPFDGTSDIPEGHAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSEEDMTVLQDWASKMEKK--YPVVGTI 435
S + +E + L+ WV K+K YPVVG++VTP A+ ++EEL F GT ++PEGH PP+YVGV KVYD+S+GG +MY G +Y+LFAG+D S ALAKMSF PE +++ ++S LS+++ +++DWA K E K YPVVG +
Sbjct: 133 STCSSLEIDQLEDWVNKFKYIKCYPVVGRLVTP-ARRGPITVEELANFKGTQEVPEGHCDPPLYVGVNKKVYDVSFGGFDMYKEGATYHLFAGKDVSRALAKMSFKPEDVNSREVSDLSDQEQKIMEDWAQKFEHKKLYPVVGDL 276
BLAST of mRNA_Ecto-sp13_S_contig6197.16912.1 vs. uniprot
Match: A0A836C9I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I0_9STRA) HSP 1 Score: 143 bits (361), Expect = 5.110e-35 Identity = 75/147 (51.02%), Postives = 103/147 (70.07%), Query Frame = 1
Query: 1 SWSELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPA-QPRD-FSLEELRPFDGTSDIPEGHAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSEEDMTVLQDWASKMEKK-YPVVGT 432
+W EL+ E ++LDGW+++++++ YP+VG+VVT P P ++ E+L G IP+G AA P+ V V GKV+D+SYGGA YG G YNLF GRDAS ALAKMSF E+LDNP ++ LS ++ V+ DWA++ EKK Y VVGT
Sbjct: 136 TWEELSHGERDTLDGWIQQFRDYKGYPMVGRVVTAPLPDPLPVYTKEQLAAGTGEGPIPDGAAAAPMLVAVAGKVFDVSYGGAPHYGKGCPYNLFVGRDASRALAKMSFDAENLDNPSIADLSLAEVGVMNDWAARFEKKGYRVVGT 282
BLAST of mRNA_Ecto-sp13_S_contig6197.16912.1 vs. uniprot
Match: A0A482STY5_9ARCH (Cytochrome b5 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STY5_9ARCH) HSP 1 Score: 144 bits (364), Expect = 1.300e-34 Identity = 74/147 (50.34%), Postives = 96/147 (65.31%), Query Frame = 1
Query: 7 SELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPRDFSL--EELRPFDGTSDIPEGHAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSEEDMTVLQDWASKME--KKYPVVGTI 435
S +N E ++LD WV K+K + +YP+VG++ TPP D +L EL F GT IPEG P+YV + G V+D+SYGG EMYGP Y+ FAG+D S ALAKMSF L+N DMS L E ++ +L DW K+ KKYPVVGT+
Sbjct: 223 SRINPFEKDALDDWVHKFKYYKQYPIVGRLSTPPT---DLTLTRSELAQFTGTGSIPEGKVHAPVYVVLNGTVFDVSYGGYEMYGPEGPYSNFAGKDISRALAKMSFDKNDLENTDMSDLDERELKILADWEKKLRETKKYPVVGTL 366
BLAST of mRNA_Ecto-sp13_S_contig6197.16912.1 vs. uniprot
Match: A0A7S3Y4U5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4U5_HETAK) HSP 1 Score: 139 bits (351), Expect = 1.160e-33 Identity = 68/141 (48.23%), Postives = 96/141 (68.09%), Query Frame = 1
Query: 13 LNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPRDFSLEELRPFDGTSDIPEGHAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSEEDMTVLQDWAS--KMEKKYPVVG 429
+V E +SLDGW +K + +YP+VG+VV PP +PR S EEL+ G PEG+A PI + V+G VYD+S+GG Y G +Y+LFAG+DAS ALAKMSF E +++ ++ LSE+++ VL DW + K KKYP++G
Sbjct: 138 FSVSEIDSLDGWYTTFKEYKQYPIVGRVVEPP-KPRKISREELQEMRGKQTCPEGYATAPICISVKGNVYDVSFGGVTFYMEGAAYHLFAGKDASRALAKMSFKDEDVNSTELKDLSEKELKVLDDWENTFKNRKKYPIIG 277
BLAST of mRNA_Ecto-sp13_S_contig6197.16912.1 vs. uniprot
Match: A0A7S1XXM8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXM8_9STRA) HSP 1 Score: 138 bits (347), Expect = 3.180e-33 Identity = 67/145 (46.21%), Postives = 98/145 (67.59%), Query Frame = 1
Query: 10 ELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPRDFSLEELRPFDGTSDIPEGHAAPPIYVGVRGKVYDMSYGG-AEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSEEDMTVLQDWASKMEKKYPVVGTIAN 441
+LN E E LDGW EK+K+ +EYPV G+VVTPP + + F+ +LR + GT +PEG+AA P+Y+ VR ++YD+S+G EMY PG Y AGRD + AL KMS E + + D+S +++ +L DWA+K ++YP VGT+ +
Sbjct: 129 DLNYGEREQLDGWYEKFKHVNEYPVRGRVVTPPGE-KLFTEAQLRAYTGTQAVPEGYAAAPLYIAVRRRIYDVSFGNLTEMYLPGGPYAKLAGRDGNRALGKMSLKEEDMFSRDISDFTDDQNQILDDWAAKFAQRYPCVGTLKD 272
BLAST of mRNA_Ecto-sp13_S_contig6197.16912.1 vs. uniprot
Match: A0A7R9UEU7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEU7_9STRA) HSP 1 Score: 138 bits (347), Expect = 6.730e-33 Identity = 70/145 (48.28%), Postives = 94/145 (64.83%), Query Frame = 1
Query: 10 ELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPRDFSLEELRPFDGTSDIPEGHAAPPIYVGVRGKVYDMSYGG-AEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSEEDMTVLQDWASKMEKKYPVVGTIAN 441
+L+ E E L+ W + YPVVG+VVTPPA P+ FS EELR + GT ++PEG+AA P+Y+ VRGK+YD+S+G EMY PG Y AGRD + AL KMS E + + DMS + E+ L DWA K E +YP+VG + +
Sbjct: 160 DLSYGEREQLENWYALFMYQKCYPVVGRVVTPPA-PKQFSEEELRKYTGTQEVPEGYAAAPLYIAVRGKIYDVSFGNLTEMYLPGGPYAKLAGRDGNRALGKMSLKEEDMFSRDMSDFTPEEHKTLDDWAKKFESRYPLVGELKD 303
BLAST of mRNA_Ecto-sp13_S_contig6197.16912.1 vs. uniprot
Match: A0A7S2R951_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R951_9STRA) HSP 1 Score: 131 bits (330), Expect = 9.670e-31 Identity = 64/146 (43.84%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 13 LNVMENESLDGWVEKYKNFSEYPVVGKVVTP---PAQPRDFSLEELRPFDGTSDIPEGHAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSEEDMTVLQDWASKMEKK--YPVVGTI 435
L+ E E LD W+ K++++ YP++G +V P + + E++ FDG ++P+G+A PIYVGV KVYD S+GG YG G SY FAG+DAS ALAKMSF P+ +N + L+E ++ ++ DWA E+K YP+VG I
Sbjct: 138 LDFGEKEELDNWLAKFEHYRSYPIMGNLVPDCDLPQSDKVLTKEDIAKFDGKGEVPDGYATAPIYVGVGEKVYDASFGGVTFYGKGCSYERFAGKDASRALAKMSFDPKDTENTAVDDLNENEIKIMNDWAKTYEEKKGYPIVGVI 283
BLAST of mRNA_Ecto-sp13_S_contig6197.16912.1 vs. uniprot
Match: W7TR10_9STRA (Heme steroid binding domain-containing n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR10_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.370e-30 Identity = 69/153 (45.10%), Postives = 93/153 (60.78%), Query Frame = 1
Query: 10 ELNVMENESLDGWVEKYKNFSEYPVVGKVVTPPAQPRDFSLEELRPFDG-------TSDIPEGHAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSEEDMTVLQDWASKM--EKKYPVVGTIAN 441
+L + ESL GWVEKYK + YPVVG++VTPP+ +L E+ + G IPEG AAPPIYV V GKV+DMS+GG YGPG Y+ AG+D S LAKMSF ++ ++S L++ L++W K +KYPVVG + +
Sbjct: 131 DLTYTQKESLHGWVEKYKYYKCYPVVGRLVTPPSG-LSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLID 282
BLAST of mRNA_Ecto-sp13_S_contig6197.16912.1 vs. uniprot
Match: A0A7S1Y1A2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y1A2_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.580e-29 Identity = 68/149 (45.64%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 7 SELNVMENESLDGWVEKYKNFSEYPVVGK-VVTPPAQPRDFSLEELRPFDGTS-DIPEGHAAPPIYVGVRGKVYDMSYGGAEMYGPGKSYNLFAGRDASVALAKMSFAPEHLDNPDMSTLSEEDMTVLQDWASKME--KKYPVVGTIAN 441
S+LN E L+ W+EK+ + YPV+GK VVT P + +S E+L P++GT D+P+G+A PIYVG KV+D+S+GG YGPG Y+ FAG+DAS ALA MSF + + ++S L E+ VL+DW E K+YP+VG +
Sbjct: 130 SKLNHGEKFELENWIEKFTYYRNYPVMGKLVVTLPDATKVWSREQLAPYNGTQKDLPDGYATAPIYVGAGNKVFDVSFGGVTFYGPGCGYHRFAGKDASRALALMSFDEADILSNEVSDLPEDKKKVLKDWIKTFEERKRYPIVGQLGK 278 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6197.16912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6197.16912.1 >prot_Ecto-sp13_S_contig6197.16912.1 ID=prot_Ecto-sp13_S_contig6197.16912.1|Name=mRNA_Ecto-sp13_S_contig6197.16912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=144bp MENESLDGWVEKYKNFSEYPVVGKVVTPPAQPRDFSLEELRPFDGTSDIPback to top mRNA from alignment at Ecto-sp13_S_contig6197:4758..8313- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6197.16912.1 ID=mRNA_Ecto-sp13_S_contig6197.16912.1|Name=mRNA_Ecto-sp13_S_contig6197.16912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3556bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6197:4758..8313- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6197:4758..8313- >mRNA_Ecto-sp13_S_contig6197.16912.1 ID=mRNA_Ecto-sp13_S_contig6197.16912.1|Name=mRNA_Ecto-sp13_S_contig6197.16912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=432bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6197:4758..8313- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |