mRNA_Ecto-sp13_S_contig6197.16911.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6197.16911.1
Unique NamemRNA_Ecto-sp13_S_contig6197.16911.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6197.16911.1 vs. uniprot
Match: D7FY32_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY32_ECTSI)

HSP 1 Score: 645 bits (1663), Expect = 9.880e-229
Identity = 307/309 (99.35%), Postives = 308/309 (99.68%), Query Frame = 1 
Query:    1 VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGQLAIYDLERNDVAAWSASAHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCLAAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF 927
            VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNG+LAIYDLERNDVAAWSASAHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCL AGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF
Sbjct:   48 VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGKLAIYDLERNDVAAWSASAHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCLTAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF 356
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BLAST of mRNA_Ecto-sp13_S_contig6197.16911.1 vs. uniprot
Match: A0A812T2R2_SYMMI (Wdr92 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812T2R2_SYMMI)

HSP 1 Score: 483 bits (1243), Expect = 5.280e-165
Identity = 225/309 (72.82%), Postives = 261/309 (84.47%), Query Frame = 1 
Query:    1 VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGQLAIYDLERNDVAAWSASAHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCLAAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF 927
            VYELNKG L+LV +     GIKC TFGASS+E+RHLA GD+ G+LAIYDLER D   +S  AH SIINA+DG GG +   GAPE+VTGGRDGCVR+WDPR+ +PV+ LEP +G+ ARDCWTVAFGN+++DE+RC+AAGYDNGD+KLFDLR   +R+ETNV NGVT L+FDR DIEMNK+VVTTLESKFR +DMRTQHP  GF  L+EKAHK+TVW  RHLPQNRD+FMTGGGNGGFNLYKYHYP SR  N K++IPMGVVG  ELLNSRV+SSQPIVS DWSPD+EGLC LSCLDQTVRV+IVTKL K+
Sbjct:   48 VYELNKGDLELVLDSTKPQGIKCGTFGASSIEERHLATGDHAGKLAIYDLERVDAPVFSQQAHTSIINAIDGCGGMDIGNGAPEIVTGGRDGCVRLWDPRVPDPVLALEPSDGQPARDCWTVAFGNSFSDEERCIAAGYDNGDIKLFDLRANAIRYETNVANGVTCLEFDRKDIEMNKMVVTTLESKFRLFDMRTQHPTGGFTCLTEKAHKATVWCVRHLPQNRDIFMTGGGNGGFNLYKYHYPPSRVANAKDDIPMGVVGTTELLNSRVLSSQPIVSLDWSPDKEGLCVLSCLDQTVRVFIVTKLNKY 356
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BLAST of mRNA_Ecto-sp13_S_contig6197.16911.1 vs. uniprot
Match: A0A835ZGH6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGH6_9STRA)

HSP 1 Score: 482 bits (1240), Expect = 1.500e-164
Identity = 217/309 (70.23%), Postives = 259/309 (83.82%), Query Frame = 1 
Query:    1 VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGQLAIYDLERNDVAAWSASAHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCLAAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF 927
            VYE+++G LKLV E++  AGIKC TFGASSLEDRH+ACGDY G+++IYDLERND   +S  AH S++NA+DG GGPE  YGAPELV+ GRDGCVRVWDPR+ +PV+ LEP EG  ARDCW VAFGN+Y DE+R + AGYDNGDVK+FDLR   + WETNV NGVT ++FDR DIEMNKL VTTLESKFR +D+RTQHP  GF+ L+E+AHKST+WLA+HLPQNRDLFMT GGNGGFNLYKY YP++R    K+  PMGV G VELLNSRVIS+QPIVSFDWSPD+ GLCCL+ LDQ++R++IVTKL K+
Sbjct:   48 VYEMDRGALKLVDEQQKSAGIKCSTFGASSLEDRHVACGDYEGKVSIYDLERNDKPVFSVQAHSSLVNAIDGTGGPELGYGAPELVSAGRDGCVRVWDPRVQQPVLSLEPEEGTAARDCWCVAFGNSYNDEERMVCAGYDNGDVKMFDLRANAVMWETNVANGVTSVEFDRRDIEMNKLAVTTLESKFRIFDLRTQHPTDGFSCLTERAHKSTIWLAKHLPQNRDLFMTAGGNGGFNLYKYRYPNNRVTQHKDGHPMGVAGSVELLNSRVISTQPIVSFDWSPDKAGLCCLASLDQSLRIFIVTKLDKY 356
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BLAST of mRNA_Ecto-sp13_S_contig6197.16911.1 vs. uniprot
Match: A0A067CTL7_SAPPC (WD repeat-containing protein 92 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CTL7_SAPPC)

HSP 1 Score: 478 bits (1231), Expect = 3.460e-163
Identity = 222/309 (71.84%), Postives = 257/309 (83.17%), Query Frame = 1 
Query:    1 VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGQLAIYDLERNDVAAWSASAHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCLAAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF 927
            +Y LN+G+LK + E E   GIKC TFGASSLE+RHLACGD+ G +++ DLER  V  +SA AHKSIIN ++G GG    YGAPE+VTGGRDGCVRVWD R++ PVV LEP +GE  RDCWTVAFGN+Y D++RC+ AGYDNGDVK+FDLRT +MRWETNV+NGV G+ FDR DIEMNKL+VTTLESKFR YD+RT HP  GF+++SEKAHKSTVW  R LPQNRDLFMTGGGNGGFNLYKYHYPSSRT  D + I MGV G VELLNSRV+S+QPIVS DWSPDREGLC L+CLDQTVRVYIV+K  K+
Sbjct:   48 IYGLNQGELKTIAEIEKPHGIKCGTFGASSLEERHLACGDFAGVMSVLDLERPSVPVYSAQAHKSIINCIEGCGGLNIGYGAPEIVTGGRDGCVRVWDIRVANPVVSLEPDQGEAVRDCWTVAFGNSYNDDERCIVAGYDNGDVKMFDLRTNSMRWETNVQNGVVGVQFDRKDIEMNKLLVTTLESKFRIYDLRTFHPTKGFSYMSEKAHKSTVWQGRFLPQNRDLFMTGGGNGGFNLYKYHYPSSRTTTDPDGILMGVGGTVELLNSRVLSTQPIVSMDWSPDREGLCVLTCLDQTVRVYIVSKTNKY 356
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BLAST of mRNA_Ecto-sp13_S_contig6197.16911.1 vs. uniprot
Match: A0A7S2V3E6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3E6_9STRA)

HSP 1 Score: 469 bits (1207), Expect = 1.480e-159
Identity = 216/309 (69.90%), Postives = 257/309 (83.17%), Query Frame = 1 
Query:    1 VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGQLAIYDLERNDVAAWSASAHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCLAAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF 927
            V+E+N+G L LV E E   GIKC TFGAS LEDR +A GDY G L I+D+ERND+  +S  AH +IINA+DG+GG +  YGAPE+VTGGRDGCVRVWDPR+ EPV+ LEP EG+  RDCW VAFG+ ++DEDRC+AAGYDNGDVKLFDLRT ++RWE NV NGVT L+FDR D+EMNKLVVTTLES+ R +DMRTQH E GFA L+EKAHK+TVW++RHLPQNRD+F+TGGGNGG N+YKYHYP SR   DK N P+GVVG VELLNSRVIS+QP+V+ +WSPDREGL  L CLDQT+RV+IVTKL K+
Sbjct:   48 VFEMNRGDLNLVAEYEKPNGIKCGTFGASPLEDRSIAVGDYAGVLNIWDVERNDLPIYSVQAHTTIINAIDGVGGVDVGYGAPEIVTGGRDGCVRVWDPRVQEPVLSLEPEEGQQVRDCWAVAFGDCHSDEDRCIAAGYDNGDVKLFDLRTNSLRWEGNVNNGVTCLEFDRKDVEMNKLVVTTLESRIRLFDMRTQHAEEGFACLAEKAHKATVWISRHLPQNRDIFLTGGGNGGLNVYKYHYPKSRVSTDKNNAPIGVVGSVELLNSRVISTQPVVAANWSPDREGLLTLVCLDQTLRVFIVTKLHKY 356
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BLAST of mRNA_Ecto-sp13_S_contig6197.16911.1 vs. uniprot
Match: H3G9P3_PHYRM (Uncharacterized protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3G9P3_PHYRM)

HSP 1 Score: 463 bits (1191), Expect = 3.910e-157
Identity = 214/309 (69.26%), Postives = 251/309 (81.23%), Query Frame = 1 
Query:    1 VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGQLAIYDLERNDVAAWSASAHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCLAAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF 927
            VY LN+G+LK +   E   GIKC TFGAS+LEDRHLA GDY G ++++DLER DV  +SA AHKSI+NA+DG GG     GAPE+VTGGRDGC+RVWD R+ EPVV L P+E +TARDCWTV+FGN+Y D +RC+  GYDNGD+K+FDLRT ++RWETN +NGV  + FDR DIEMNKL+VTTLESKFR YD+RT HPE GFA ++EKAHKST+W  R LPQNRDLFMTGGGNGGFNLYKYHYP SRT  D +    GV G VELLNSRV+S+QPIVS DWS DREGLC L+CLDQTVRVYIVTK+ K+
Sbjct:   48 VYGLNQGQLKTLAVHEKQHGIKCGTFGASALEDRHLATGDYGGVMSVWDLERADVPVYSAQAHKSIVNAIDGCGGQNIGSGAPEIVTGGRDGCIRVWDVRVPEPVVTLAPKEQDTARDCWTVSFGNSYNDVERCVVGGYDNGDIKMFDLRTNSLRWETNCQNGVVNVQFDRKDIEMNKLLVTTLESKFRVYDLRTFHPEQGFACMTEKAHKSTIWQGRFLPQNRDLFMTGGGNGGFNLYKYHYPLSRTAKDADGRLYGVCGTVELLNSRVLSTQPIVSMDWSTDREGLCALACLDQTVRVYIVTKMNKY 356
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6197.16911.1 vs. uniprot
Match: A0A485LLG9_9STRA (Aste57867_22922 protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485LLG9_9STRA)

HSP 1 Score: 461 bits (1185), Expect = 5.180e-156
Identity = 218/323 (67.49%), Postives = 254/323 (78.64%), Query Frame = 1 
Query:    1 VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGQLAIYDLERNDVAAWSASAHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFG--------------NAYTDEDRCLAAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF 927
            VY L +G+LK ++E E   GIKC TFGASSL++R LA GD+ G +++YD E+ ++  +SA AHKSIIN +DG GG    YGAPELVTGGRDGCVRVWD R++ PVV LEP + E  RDCW+VAFG              N++ DE+RC+AAGYDNGDVKLFDLRT TMRWETNV+NGV G+ FDR DIEMNKL+V TLESKFR YDMRT HP  G+A++SEKAHKSTVW  R LPQNRDLFMTGGGNGGFNLYKYHYPSSRT  D + + MGV G VELLNSRV+S+QPIVS DWS DREGLC LSCLDQT+RVYIV+K  K+
Sbjct:   48 VYGLQQGELKSIYELEKQHGIKCGTFGASSLDERQLAVGDFAGVMSVYDFEKPEIPVYSAQAHKSIINCIDGCGGLNIGYGAPELVTGGRDGCVRVWDTRVANPVVSLEPEQDEAVRDCWSVAFGAPSREPRCLIPAVGNSFNDEERCVAAGYDNGDVKLFDLRTNTMRWETNVQNGVVGVQFDRKDIEMNKLLVATLESKFRIYDMRTFHPSKGYAYMSEKAHKSTVWQGRFLPQNRDLFMTGGGNGGFNLYKYHYPSSRTTQDADGVMMGVGGTVELLNSRVLSTQPIVSMDWSADREGLCVLSCLDQTIRVYIVSKTHKY 370
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6197.16911.1 vs. uniprot
Match: A0A7S3K1G1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1G1_9STRA)

HSP 1 Score: 456 bits (1172), Expect = 3.020e-154
Identity = 219/310 (70.65%), Postives = 251/310 (80.97%), Query Frame = 1 
Query:    1 VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGQLAIYDLERNDVAAWSAS-AHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCLAAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF 927
            VYEL  G++ L  ER+   GIKC TFGASS   R +A GDY+G LAI+DLER D  ++S S AHKSIIN +DG GG     GAPELVTG RDGCVRVWDPR++E V+ LEP EG+  RDCWTVAFGN++ DE RC+ AGYDNGD+KLFDLRT TMRWETN  NGVT + FDR DIEMNKLVVTTLES+FR +DMRTQH E GF H++EKAHK+TVWLARHLPQNRDL+MTGGGNGGFNLY YHYP  R K  K++ P+GV G VELLNSRVIS+QPIV+FDWSPDREGL  L+CLDQT+RVYI TKL K+
Sbjct:   49 VYELKDGQMSLAEERQKAFGIKCGTFGASSFTQRSIATGDYDGGLAIWDLERLDTPSYSISKAHKSIINGIDGAGGLGVGGGAPELVTGSRDGCVRVWDPRVNEAVISLEPVEGQPTRDCWTVAFGNSFGDE-RCVCAGYDNGDIKLFDLRTNTMRWETNANNGVTCVQFDRPDIEMNKLVVTTLESRFRVFDMRTQHAEDGFVHVTEKAHKATVWLARHLPQNRDLWMTGGGNGGFNLYTYHYPKKRFKTHKDDTPVGVPGDVELLNSRVISTQPIVAFDWSPDREGLAVLACLDQTLRVYICTKLEKY 357
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6197.16911.1 vs. uniprot
Match: A0A5D6XK33_9STRA (Uncharacterized protein n=2 Tax=Pythium TaxID=4797 RepID=A0A5D6XK33_9STRA)

HSP 1 Score: 454 bits (1167), Expect = 1.660e-153
Identity = 208/309 (67.31%), Postives = 252/309 (81.55%), Query Frame = 1 
Query:    1 VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGQLAIYDLERNDVAAWSASAHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCLAAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF 927
            ++ LN+G+L+ V E E   GIKC TFGA+SLEDRHLA GDY G ++++DLE+ +V  ++A AHK+I+NA+DG GG    +GAPE+VTGGRDG +RVWD R+ +PVV L P+E ++ARDCWTV FGNAY DE+RC+  GYDNGD+K+FDLRT ++RWETN +NGV    FDR DIEMNKL+VTTLESKFR YD+RT HPE+GFA +SEKAHKST+W  R LPQNRDLFMTGGGNGGFNLYKYHYP SRT  D +   +GV G VELLNSRV+S+QPIVS DWSPDREGLC L+ LDQTVRVYIV+K  K+
Sbjct:   48 IFALNQGELRTVAEIEKPQGIKCGTFGAASLEDRHLATGDYGGVMSVWDLEKTEVPVYAAQAHKAIVNAIDGCGGQNIGHGAPEIVTGGRDGFIRVWDIRVPDPVVTLAPKESDSARDCWTVCFGNAYNDEERCVVGGYDNGDIKMFDLRTGSLRWETNCQNGVVNAQFDRKDIEMNKLLVTTLESKFRLYDLRTFHPESGFACMSEKAHKSTIWQGRFLPQNRDLFMTGGGNGGFNLYKYHYPVSRTAKDADGRLLGVCGTVELLNSRVLSTQPIVSMDWSPDREGLCVLASLDQTVRVYIVSKTHKY 356
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6197.16911.1 vs. uniprot
Match: F0Y563_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y563_AURAN)

HSP 1 Score: 451 bits (1161), Expect = 1.340e-152
Identity = 216/310 (69.68%), Postives = 249/310 (80.32%), Query Frame = 1 
Query:    1 VYELNKGKLKLVHERETDAGIKCCTFGASSLEDRHLACGDYNGQLAIYDLERNDVAAWSA-SAHKSIINAVDGLGGPESTYGAPELVTGGRDGCVRVWDPRISEPVVKLEPREGETARDCWTVAFGNAYTDEDRCLAAGYDNGDVKLFDLRTQTMRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFAHLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKENIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIVTKLGKF 927
            +YEL  GK+++V E+  D G+KC TFGASSL +R LA GDY G L ++DLER D   +S   AHK+IIN +DG+GG     GAPELVTG RDGCVRVWDPR+ EPVV LEP EG+  RDCW  AFGN+  DE R +AAGYDNGDVKLFDLRT  MRWETN  NGVT ++FDR DIEMNKLVVTTLES+FR +D+RTQH + GFAH +EKAHK+TVWLARHLPQNRD+FMTGGGNGGFNLY YHYP  RT   K+N P+GV G VELLNSRVIS+QPIVSFDWSPD+EGL  LSCLDQT+RVYI TKL ++
Sbjct:   48 IYELKGGKMEVVAEKTHDCGLKCGTFGASSLGERSLATGDYKGGLHVFDLERLDAPTFSVPGAHKAIINGIDGVGGLGIGGGAPELVTGSRDGCVRVWDPRVREPVVSLEPVEGQPVRDCWCAAFGNSVGDE-RVVAAGYDNGDVKLFDLRTNAMRWETNASNGVTCVEFDRKDIEMNKLVVTTLESRFRVFDLRTQHADDGFAHCTEKAHKATVWLARHLPQNRDVFMTGGGNGGFNLYAYHYPKKRTATHKDNAPVGVPGTVELLNSRVISTQPIVSFDWSPDKEGLAVLSCLDQTLRVYICTKLDRY 356
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6197.16911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY32_ECTSI9.880e-22999.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A812T2R2_SYMMI5.280e-16572.82Wdr92 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A835ZGH6_9STRA1.500e-16470.23WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A067CTL7_SAPPC3.460e-16371.84WD repeat-containing protein 92 n=4 Tax=Saprolegni... [more]
A0A7S2V3E6_9STRA1.480e-15969.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
H3G9P3_PHYRM3.910e-15769.26Uncharacterized protein n=24 Tax=Peronosporaceae T... [more]
A0A485LLG9_9STRA5.180e-15667.49Aste57867_22922 protein n=5 Tax=Aphanomyces TaxID=... [more]
A0A7S3K1G1_9STRA3.020e-15470.65Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A5D6XK33_9STRA1.660e-15367.31Uncharacterized protein n=2 Tax=Pythium TaxID=4797... [more]
F0Y563_AURAN1.340e-15269.68Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6197contigEcto-sp13_S_contig6197:493..4682 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score331.6
Seed ortholog evalue1.9e-88
Seed eggNOG ortholog2880.D7FY32
Preferred nameWDR92
Model size1777
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005955,GO:0006355,GO:0006357,GO:0007154,GO:0007165,GO:0008150,GO:0008287,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0019722,GO:0019904,GO:0019932,GO:0023052,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032182,GO:0032991,GO:0033173,GO:0035556,GO:0043130,GO:0044424,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0048016,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0080090,GO:0097720,GO:1902494,GO:1902680,GO:1903293,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons6
EggNOG free text desc.ubiquitin binding
EggNOG OGs28J7X@1,2QRKB@2759
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-27_006920.1
Cds size471
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6197.16911.1prot_Ecto-sp13_S_contig6197.16911.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6197 2569..3835 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463862.905396-UTR-Ecto-sp13_S_contig6197:492..6001681463862.905396-UTR-Ecto-sp13_S_contig6197:492..600Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6197 493..600 +
1681463862.9189808-UTR-Ecto-sp13_S_contig6197:1116..12631681463862.9189808-UTR-Ecto-sp13_S_contig6197:1116..1263Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6197 1117..1263 +
1681463862.9296277-UTR-Ecto-sp13_S_contig6197:1955..20421681463862.9296277-UTR-Ecto-sp13_S_contig6197:1955..2042Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6197 1956..2042 +
1681463862.9443562-UTR-Ecto-sp13_S_contig6197:2451..25681681463862.9443562-UTR-Ecto-sp13_S_contig6197:2451..2568Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6197 2452..2568 +
1681463862.9969332-UTR-Ecto-sp13_S_contig6197:3835..46821681463862.9969332-UTR-Ecto-sp13_S_contig6197:3835..4682Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6197 3836..4682 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463862.9610949-CDS-Ecto-sp13_S_contig6197:2568..26431681463862.9610949-CDS-Ecto-sp13_S_contig6197:2568..2643Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6197 2569..2643 +
1681463862.9770467-CDS-Ecto-sp13_S_contig6197:3135..33571681463862.9770467-CDS-Ecto-sp13_S_contig6197:3135..3357Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6197 3136..3357 +
1681463862.9875138-CDS-Ecto-sp13_S_contig6197:3661..38351681463862.9875138-CDS-Ecto-sp13_S_contig6197:3661..3835Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6197 3662..3835 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6197.16911.1

>prot_Ecto-sp13_S_contig6197.16911.1 ID=prot_Ecto-sp13_S_contig6197.16911.1|Name=mRNA_Ecto-sp13_S_contig6197.16911.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp
MRWETNVKNGVTGLDFDRNDIEMNKLVVTTLESKFRTYDMRTQHPEAGFA
HLSEKAHKSTVWLARHLPQNRDLFMTGGGNGGFNLYKYHYPSSRTKNDKE
NIPMGVVGKVELLNSRVISSQPIVSFDWSPDREGLCCLSCLDQTVRVYIV
TKLGKF*
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mRNA from alignment at Ecto-sp13_S_contig6197:493..4682+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6197.16911.1 ID=mRNA_Ecto-sp13_S_contig6197.16911.1|Name=mRNA_Ecto-sp13_S_contig6197.16911.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4190bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6197:493..4682+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGTACGAGCTCAACAAGGGCAAACTCAAGCTTGTTCATGAAAGGGAGAC
GGACGCAGGCATCAAGTGCTGTACTTTCGGAGCGTCGTCGCTAGAGGACC
GACATTTGGTGAGATTCTTGTTACCCCCGTTGAGACCCTCTCTGCCTACC
TGTGGCAGAAAGGTTCACTTTGTGTAGTTAGTCTCGTCCCAATCTGAGGA
GGCAGACTGAGAACTGCGATGAATTTGAGCATGCTGCTGCTGACTCGCGT
TCAGTTGGGAGCTTGTGATTGCTTATAGTCCGTCCGATTCTCTACCTCAA
TGCAGCCCATCATTGCCGTCGCCACGGAAACTGCCTGTGATTCCGTCTCA
AGTCCGAGCACACAGTTTGCCTAGAACCCAAGCACTGGCTGTGGCGAGTT
GCTACGTAGCTTAGCCCTCCCGCTGAGTCAGCCCCTGGTGCCGGAGCATC
GCGATTGACTGGTGGAGGGCGTTAAGAGGAACTACGAGGGTGCGCAGAGA
CCTGAGTATGTACACCCCGATCGGTGGATGCGACTTACGAAAGTCTTTGG
CGAAATAATTCTACCCTCATCCTCACCCCTGGCCCCCACCCTTGCCTTGG
GGCTCGATCTATCGTCTATCTCAGGCTTGCGGGGACTACAACGGCCAGCT
TGCCATCTACGATTTAGAGAGAAACGACGTCGCGGCCTGGTCTGCAAGCG
CTCACAAGTCCATCATCAACGCCGTGGATGGGTTGGGGGGGCCTGAGTCT
ACATACGGGGCCCCCGAGCTGGTGAGCGAGCGAACATTGGCAGGATCTCG
AGAAAACGCCGAACCGCCTAAATCTTGTTACATCGGAGGAGCTGTGAAGG
AAGTCGCAAAGTGTTTCTGAATAACCAGCCTTGGCTTGCCTAGTCACATA
ACTATTTCTTTCGGACGACTCGCTAAACACGGGCCGGGGCTTGCTTTTCC
TTGTGCAGGACCACATACGTCTGTGTGCATTGCAGCACAAAGCCTTGGTG
ATTCCATCGAGTTTTTTGCTGCCTCCACATTTTCCCGCAGTAAGAGTAAG
AGTCAGCGTTCGATAGCGTTATGGCGCAACCGACGGCTGGTTCGGGAGGC
GAATCTCCTCATACCACACAGTCAAAGACACATACTCCGACGAATCTCCA
GGAATACATGCTAGGGCCAGGCGTGCCGCCAAGACCGAGAGCGAGGCTTG
CAGTACTCGTGTCCCACCAACGAGAGGCCTCAATTCAACCCCATCGTCAG
CCAGCTCCCTCGGGTCATGCGAAACCGTATCATGTTGCTTTTTTTCCGCA
TCGTGCTACTGGTGCCCGCTTGTGGTCGTCATGGAGGGGACCAATAGCCG
CCACCCACCCTCCACTTATCTGAGTACAAGCCCGCAAACTACTGCAAGAC
CAGCACGTTCTCGTGGACAAATGACATATTTCATTGACACTGAAATTGTG
TCATGTTTCTTAGGTAACCGGAGGAAGAGATGGGTGTGTCCGCGTGTGGG
ACCCTAGGATCAGCGAGCCAGTGGTGAAGCTGGAGCCAAGAGAGGGAGAG
GTGAGAGAAACAAATCGCCCTCTAGCTGTGCTGTGCTGTTGCATCGTGTT
CTGCTCGTATTCACCACCAAACGAAGCGAGGTGTTTGGGTTAGTCTATAG
GCTGGAGTTTTGTTGCGTGCAGAGGTCCTCCCGACTTTTGCCCTCAGGGG
TTCAACAGCACAGCACAGCTGTTGCAGTACCCCAATTTATTCTTGCAAAC
TTGAAGAAAATGTTGGCGATGCCGCGCCAAACACTGCACACAACGTGTGT
CACCCATTTGCAAGGGTTATCACTATCGCGCATGTCTCGGGATATTAATG
GAACATGCCGATCGATCCAAGCTCAACGCCCATTCGTATCTAAATGCCAA
CCCGCCGCGTCCTTCGTTAATAAATCAATCAACAAACATACCCTTTTTCT
CTCGATCAGACCGCACGGGATTGTTGGACCGTTGCATTCGGAAATGCCTA
CACGGACGAAGACCGCTGCTTGGCCGCTGGGTACGACAACGGCGACGTCA
AGCTTTTCGACCTCAGGACGCAGACTATGCGGTGGGAGACTAACGTTAAG
AACGGGGTTACCGGCCTGGACTTCGACCGCAACGACATCGAGATGAACAA
GGTCGGTTGCGATGCGTGTTGCGCGTAATCGCTTTGCTGCCACGAAACTT
GGTAGACAAATGGTATGGTTCGCTGCATCGATTTACCACACTGGCTTGTA
GCAGCCTACCCACGGTATTGAATCCGGACGGTATGGGACTTGACACTATG
CAGCCCCGACGACTCGAGAACCATGAGCTGTACCGCACGGTATTTTGCGC
GGGTAGTGGGGTAAGCATTCCGCGTCTGGGGGTGATGTGGATTACTCATT
CGCCACGACGAAAAATACTTGCAAGACCCTTCCATCACGAACTTTGCATC
TGGTGTACCCTATATCGGTGTCCTTCCGAGCCTTGTCCGGCATCAGCGCG
ACCTTCGCATCAGTATAGCTTCCCTCTATGTAACGTTTCCTGCTTTGTCG
GCCCGCTTGAAAGCCGATTTTCCAACGCCAACAATGCCTACTCACACCCT
GAAGCGGCGAACAATGCCTCATTACTGCTTATCGCACGCCCAGCTGGTCG
TAACGACGCTCGAGTCCAAGTTCCGCACGTACGACATGCGGACGCAGCAC
CCGGAGGCTGGGTTTGCACACCTCAGCGAGAAGGCGCACAAGTCCACGGT
GTGGCTCGCGAGGCATCTCCCTCAGAACAGAGACCTGTTCATGACCGGGG
GAGGCAACGGCGGGTTCAACCTGTACAAGTACCACTACCCGAGCTCGCGT
ACGAAGAATGACAAGGTAGGTTTACGGTTCGGGTTCGGTGACCCTACGTG
GTGCTTCGTTTACCACATGGGCCGAGTTGTTGTTGATTTTCGTCACATAA
AGGCGCATGCACAACATACCACACAATAATTTAACAAGTAAACGGCCGAG
ATCGATCTTGTAAAACTCTCGAATCACAACGTACAATATACCGCGATTGT
TGCTGTTGGTGATGTACACGACACACGCGACTCATGATGCACCTTTTCCT
TTCTCCTCCATGTTTTCATGTTTTCGAAACACGACCATGCGAACGAAACA
CAAACACGAAAACTTGCAGGAGAACATCCCGATGGGCGTGGTTGGCAAGG
TAGAGCTCCTCAACTCGAGGGTCATCTCCTCGCAGCCCATCGTCAGCTTC
GACTGGAGCCCGGACCGCGAGGGGCTGTGCTGCCTCAGCTGTCTCGACCA
GACCGTACGCGTGTACATCGTCACCAAGCTCGGAAAATTCTGAGCAAAAG
TGTTCGAACGTGTACCACATGTACATGGTCCGCAGTCGAGCACCAGTTTG
CAAAGCCTGCCTCGACATGTAGTGCCGGCTCCGTAGTTTGTTTTTTGGCG
CAAACCCCACAACAGCTGGTGTTTGAAATGTTGTCCGCGGTGTGCGAGCA
ACTCTATCAGACGTTTTCGGTTCGTGATGGGCGTTGGTTCTCACCGCTTG
AAGCTCGTTTGTGTGGATTGAGAGTTGGCAGTGAAGTGACAGCAAGTATT
TCGGAGGTGGTAGGCCTACGTGTGTGCATGTATTCGGAATGTTGCTGCCA
GCGCGTTGAAGCTCTGTGAAAACTAGAGAGTGGGCATCGTGTACATGTGC
ATACATACTGGATTGTGTTTGTCTACGTTCAATCGCGTCTGTCAAAAGAA
CAGAATAAACAATGGAACACAGTCGATCTCAATGACGTGCGTGCATGCGA
AAACGCATGCTACGATTTACATGTACCGCACAAGAGCAAGTTTCCTCATC
GGCTTGTTGTACGGTTTACGCGCACCGCAAGGGTCAAGGCAATGTGCATG
GCCAATGATGGCCTTCAGAGAGTAGACAAGCGGAGCGCAAGTAGAGCATT
TTTGGTCTCTACTGCCGCCCTGCATACTGGTATACGTGTGCTGACCTGAG
ACAAGAAAATGGCATGGCGCAGATTAGACGCGGGCTTTAGATTCCGCTTC
TTCTGTGCTTGTTGCAACGGCGCTAGCCGTGTGTAGTGTGTAGGGTGTTG
GTCCGGCCAAGGCTCAGAAATTTTTCCAAGAAAGTCACCTCGACCAATCT
CTCTCAAGGGCATGTATTCCCTCCCTTTTGCGTTTATGCC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6197:493..4682+

>mRNA_Ecto-sp13_S_contig6197.16911.1 ID=mRNA_Ecto-sp13_S_contig6197.16911.1|Name=mRNA_Ecto-sp13_S_contig6197.16911.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6197:493..4682+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGGTGGGAGACTAACGTTAAGAACGGGGTTACCGGCCTGGACTTCGA
CCGCAACGACATCGAGATGAACAAGCTGGTCGTAACGACGCTCGAGTCCA
AGTTCCGCACGTACGACATGCGGACGCAGCACCCGGAGGCTGGGTTTGCA
CACCTCAGCGAGAAGGCGCACAAGTCCACGGTGTGGCTCGCGAGGCATCT
CCCTCAGAACAGAGACCTGTTCATGACCGGGGGAGGCAACGGCGGGTTCA
ACCTGTACAAGTACCACTACCCGAGCTCGCGTACGAAGAATGACAAGGAG
AACATCCCGATGGGCGTGGTTGGCAAGGTAGAGCTCCTCAACTCGAGGGT
CATCTCCTCGCAGCCCATCGTCAGCTTCGACTGGAGCCCGGACCGCGAGG
GGCTGTGCTGCCTCAGCTGTCTCGACCAGACCGTACGCGTGTACATCGTC
ACCAAGCTCGGAAAATTCTGA
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