mRNA_Ecto-sp13_S_contig6193.16906.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6193.16906.1 vs. uniprot
Match: A0A6H5KHD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD4_9PHAE) HSP 1 Score: 340 bits (872), Expect = 2.480e-105 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1
Query: 22 GGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQA 540
GGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQA
Sbjct: 1003 GGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQA 1175
BLAST of mRNA_Ecto-sp13_S_contig6193.16906.1 vs. uniprot
Match: D7FJC4_ECTSI (DNA repair helicase rad5,16, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC4_ECTSI) HSP 1 Score: 290 bits (743), Expect = 8.190e-91 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
Query: 19 AGGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSK 453
AGGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSK
Sbjct: 625 AGGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSK 769
BLAST of mRNA_Ecto-sp13_S_contig6193.16906.1 vs. uniprot
Match: A0A8K1CQ45_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ45_PYTOL) HSP 1 Score: 214 bits (546), Expect = 2.460e-61 Identity = 105/171 (61.40%), Postives = 130/171 (76.02%), Query Frame = 1
Query: 28 LLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQA 540
LLG W RVILDEAHSI+N T RAC L+A RW +TGTPIQNSL D+ +LL FLR+EPWS WW++VI++P++ GD +AL RLK +L PILLRRTK + D+ G+ IVELPPK +EI +LQ + EEREFY+A+ RS+ EF GYV++G M SYIAI LLLRLRQA
Sbjct: 558 LLGTEWDRVILDEAHSIKNRATTYFRACAALQAVHRWCLTGTPIQNSLSDLFSLLCFLRYEPWSRVAWWKRVIANPFEQGDDQALVRLKVILTPILLRRTKHSRDAHGKNIVELPPKHIEIAKLQFTEEEREFYQAVYDRSRAEFNGYVSSGAGMSSYIAIFALLLRLRQA 728
BLAST of mRNA_Ecto-sp13_S_contig6193.16906.1 vs. uniprot
Match: A0A662Y6B2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6B2_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.060e-59 Identity = 107/185 (57.84%), Postives = 139/185 (75.14%), Query Frame = 1
Query: 7 YPVLA------GGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGD-AEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQA 540
Y VLA G LL W+RVILDEAHSI+N T +AC L A RW +TGTPIQNSL+D+ +LL FL+++PWS WW++VI+ PY+DGD A+AL RLK +LAP+LLRRTK + D +GR IV+LPPK V++VRL+ SA+ER FY+A+ +S+ EF G+VA+G+ M SY+AI LLLRLRQA
Sbjct: 528 YGVLAAEADKGGLLLATDWTRVILDEAHSIKNRLTGYFKACSTLRATHRWCLTGTPIQNSLEDLFSLLCFLQYQPWSRVAWWKRVIAKPYEDGDDADALGRLKLILAPVLLRRTKHSRDKQGRRIVQLPPKRVDLVRLEFSADERAFYQAVFDKSRAEFNGFVASGSAMSSYVAIFALLLRLRQA 712
BLAST of mRNA_Ecto-sp13_S_contig6193.16906.1 vs. uniprot
Match: A0A5A8D5B7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D5B7_CAFRO) HSP 1 Score: 207 bits (526), Expect = 2.580e-59 Identity = 98/169 (57.99%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 34 GVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQA 540
G RW RV+LDEAH+I+NT+T+ SR+CL +EA RWA+TGTP+QNSL D+ +L+ F+RH+PW + WWR+VI+ P++ GD AL L+ +L P+LLRRTK D GRPIV LPPK+ E+V L LS ER FY+A+ RSK FEG+ AAGTV+ Y IL+LL+RLRQA
Sbjct: 226 GARWRRVVLDEAHAIKNTSTDTSRSCLAIEAVHRWALTGTPVQNSLKDLHSLVRFMRHQPWDEPAWWRRVIAQPFEAGDPRALPTLQALLRPLLLRRTKGMRDVDGRPIVVLPPKSEELVWLALSESERAFYDAIYSRSKATFEGFEAAGTVLNQYAVILSLLVRLRQA 394
BLAST of mRNA_Ecto-sp13_S_contig6193.16906.1 vs. uniprot
Match: A0A5A8CW93_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CW93_CAFRO) HSP 1 Score: 207 bits (526), Expect = 3.700e-59 Identity = 98/169 (57.99%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 34 GVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQA 540
G RW RV+LDEAH+I+NT+T+ SR+CL +EA RWA+TGTP+QNSL D+ +L+ F+RH+PW + WWR+VI+ P++ GD AL L+ +L P+LLRRTK D GRPIV LPPK+ E+V L LS ER FY+A+ RSK FEG+ AAGTV+ Y IL+LL+RLRQA
Sbjct: 57 GARWRRVVLDEAHAIKNTSTDTSRSCLAIEAVHRWALTGTPVQNSLKDLHSLVRFMRHQPWDEPAWWRRVIAQPFEAGDPRALPTLQALLRPLLLRRTKGMRDVDGRPIVVLPPKSEELVWLALSESERAFYDAIYSRSKATFEGFEAAGTVLNQYAVILSLLVRLRQA 225
BLAST of mRNA_Ecto-sp13_S_contig6193.16906.1 vs. uniprot
Match: A0A5A8CAC5_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CAC5_CAFRO) HSP 1 Score: 207 bits (526), Expect = 1.220e-58 Identity = 98/169 (57.99%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 34 GVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQA 540
G RW RV+LDEAH+I+NT+T+ SR+CL +EA RWA+TGTP+QNSL D+ +L+ F+RH+PW + WWR+VI+ P++ GD AL L+ +L P+LLRRTK D GRPIV LPPK+ E+V L LS ER FY+A+ RSK FEG+ AAGTV+ Y IL+LL+RLRQA
Sbjct: 260 GARWRRVVLDEAHAIKNTSTDTSRSCLAIEAVHRWALTGTPVQNSLKDLHSLVRFMRHQPWDEPAWWRRVIAQPFEAGDPRALPTLQALLRPLLLRRTKGMRDVDGRPIVVLPPKSEELVWLALSESERAFYDAIYSRSKATFEGFEAAGTVLNQYAVILSLLVRLRQA 428
BLAST of mRNA_Ecto-sp13_S_contig6193.16906.1 vs. uniprot
Match: A0A662XF88_9STRA (RanBP-type and C3HC4-type zinc finger-containing protein 1 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XF88_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.130e-57 Identity = 102/185 (55.14%), Postives = 137/185 (74.05%), Query Frame = 1
Query: 7 YPVLA------GGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGD-AEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQA 540
Y VLA G LL W+RVILDEAHSI+N T +AC L A RW +TGTPIQNSL+D+ +LL FL+++PWS WW++V++ PY+DGD A AL RLK +L P+LLRRTK + D +G+ +V+LPPK V++V+L+ SA+ER FY+A+ +S+ EF G+VA+G+ M SY+AI LLLRLRQA
Sbjct: 501 YGVLAAESDKGGLLLTTDWTRVILDEAHSIKNRLTGHFKACSTLRATHRWCLTGTPIQNSLEDLFSLLCFLQYQPWSRVAWWKRVVAKPYEDGDDANALGRLKLILTPVLLRRTKHSRDKQGKRVVQLPPKRVDLVKLEFSADERAFYQAVFDKSRAEFNGFVASGSAMSSYVAIFALLLRLRQA 685
BLAST of mRNA_Ecto-sp13_S_contig6193.16906.1 vs. uniprot
Match: A0A7C8ZY55_OPUST (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZY55_OPUST) HSP 1 Score: 189 bits (479), Expect = 2.210e-57 Identity = 87/172 (50.58%), Postives = 128/172 (74.42%), Query Frame = 1
Query: 22 GGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGDAEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQ 537
G L + WSRV+LDEAH+I+N+ ++ S A L AD RW +TGTPIQN+L+D+ +LL FL+ EPW + WW K+I P+++GD L+ ++++L PI+LRRTK ++D GRPI+ LPP V+++ +L+ ER+FYEAL K+SK++F+ +VA G V+ +Y +IL LLLRLRQ
Sbjct: 2 GALYSICWSRVVLDEAHTIKNSKSQISMAAAALTADCRWCLTGTPIQNNLEDIYSLLRFLKVEPWGNWAWWNKLIQKPFEEGDERGLKLVQSILRPIMLRRTKHSVDREGRPILVLPPANVQVIYCELTEAERDFYEALFKKSKVKFDKFVAEGRVLHNYASILELLLRLRQ 173
BLAST of mRNA_Ecto-sp13_S_contig6193.16906.1 vs. uniprot
Match: G5AJ99_PHYSP (RanBP-type and C3HC4-type zinc finger-containing protein 1 (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AJ99_PHYSP) HSP 1 Score: 201 bits (512), Expect = 3.400e-57 Identity = 97/174 (55.75%), Postives = 131/174 (75.29%), Query Frame = 1
Query: 22 GGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGTPIQNSLDDMAALLAFLRHEPWSDRGWWRKVISDPYKDGD-AEALRRLKTVLAPILLRRTKSTLDSRGRPIVELPPKTVEIVRLQLSAEEREFYEALKKRSKIEFEGYVAAGTVMKSYIAILTLLLRLRQA 540
G L W+RVILDEAHSI+N +T + C ++A RW +TGTPIQN+LDDM +LL FL+++PWS WW++VI+ PY+DGD AL RLK +L PILLRRTK + D +G+ IV+LPPK V++V+L+ S +ER FY+A+ +S+ EF G+VA+G+ M SY+AI LLLRLRQA
Sbjct: 518 GVLTTAEWNRVILDEAHSIKNRSTGYFKTCSAMKATHRWCLTGTPIQNTLDDMFSLLCFLQYQPWSRVAWWKRVITKPYEDGDDVNALGRLKVILTPILLRRTKHSRDKQGKMIVQLPPKHVDLVKLEFSPDERAFYQAVYDKSRAEFNGFVASGSAMTSYVAIFALLLRLRQA 691 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6193.16906.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6193.16906.1 >prot_Ecto-sp13_S_contig6193.16906.1 ID=prot_Ecto-sp13_S_contig6193.16906.1|Name=mRNA_Ecto-sp13_S_contig6193.16906.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp MLYPVLAGGLLGVRWSRVILDEAHSIRNTNTEQSRACLRLEADQRWAVTGback to top mRNA from alignment at Ecto-sp13_S_contig6193:5797..8390- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6193.16906.1 ID=mRNA_Ecto-sp13_S_contig6193.16906.1|Name=mRNA_Ecto-sp13_S_contig6193.16906.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6193:5797..8390- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6193:5797..8390- >mRNA_Ecto-sp13_S_contig6193.16906.1 ID=mRNA_Ecto-sp13_S_contig6193.16906.1|Name=mRNA_Ecto-sp13_S_contig6193.16906.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=540bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6193:5797..8390- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |