prot_Ecto-sp13_S_contig61922.16903.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig61922.16903.1
Unique Nameprot_Ecto-sp13_S_contig61922.16903.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length76
Homology
BLAST of mRNA_Ecto-sp13_S_contig61922.16903.1 vs. uniprot
Match: A0A4S4DTL7_CAMSI (Importin subunit alpha n=6 Tax=Ericales TaxID=41945 RepID=A0A4S4DTL7_CAMSI)

HSP 1 Score: 101 bits (252), Expect = 1.810e-23
Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    1 QVIINFNALPWLLNLLSS-SKKGIRKEACWTISNITAGNKEQIQAVIDANIIPPLIQLLSNAEFD 64
            Q IIN  ALP+LLNLL+S SKK I+KEACWTISNITAGNKEQIQAVI+ANII PL+ LL NAEFD
Sbjct:  322 QCIINHQALPYLLNLLTSTSKKSIKKEACWTISNITAGNKEQIQAVIEANIIGPLVHLLQNAEFD 386          
BLAST of mRNA_Ecto-sp13_S_contig61922.16903.1 vs. uniprot
Match: A0A1D1Y9X0_9ARAE (Importin subunit alpha-1b (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y9X0_9ARAE)

HSP 1 Score: 93.2 bits (230), Expect = 6.830e-23
Identity = 49/68 (72.06%), Postives = 56/68 (82.35%), Query Frame = 0
Query:    1 QVIINFNALPWLLNLLSSS-KKGIRKEACWTISNITAGNKEQIQAVIDANIIPPLIQLLSNAEFDIRK 67
            Q II+  ALP LLNLL+ + KK I+KEACWTISNITAGNKEQIQAVI+A II PL+ LL  AEFDI+K
Sbjct:   48 QHIIDHQALPCLLNLLTHNHKKSIKKEACWTISNITAGNKEQIQAVINAAIIAPLVHLLQTAEFDIKK 115          
BLAST of mRNA_Ecto-sp13_S_contig61922.16903.1 vs. uniprot
Match: A0A2J6KLC2_LACSA (Uncharacterized protein n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6KLC2_LACSA)

HSP 1 Score: 96.7 bits (239), Expect = 7.270e-23
Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 QVIINFNALPWLLNLLSSS-KKGIRKEACWTISNITAGNKEQIQAVIDANIIPPLIQLLSNAEFD 64
            Q IIN  ALP LLNLL+++ KK I+KEACWTISNITAGNKEQIQ VI+ANII PLI LL NAEFD
Sbjct:   96 QYIINHQALPCLLNLLTNNHKKSIKKEACWTISNITAGNKEQIQTVIEANIIGPLIHLLQNAEFD 160          
BLAST of mRNA_Ecto-sp13_S_contig61922.16903.1 vs. uniprot
Match: UPI001C68ECFF (importin subunit alpha-1a-like n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI001C68ECFF)

HSP 1 Score: 96.7 bits (239), Expect = 1.020e-22
Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 QVIINFNALPWLLNLLSSS-KKGIRKEACWTISNITAGNKEQIQAVIDANIIPPLIQLLSNAEFD 64
            Q IIN  ALP LLNLL+++ KK I+KEACWTISNITAGNKEQIQ VI+ANII PLI LL NAEFD
Sbjct:  159 QYIINHQALPCLLNLLTNNHKKSIKKEACWTISNITAGNKEQIQTVIEANIIGPLIHLLQNAEFD 223          
BLAST of mRNA_Ecto-sp13_S_contig61922.16903.1 vs. uniprot
Match: A0A2J6KPP8_LACSA (Uncharacterized protein n=3 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6KPP8_LACSA)

HSP 1 Score: 96.7 bits (239), Expect = 1.860e-22
Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 QVIINFNALPWLLNLLSSS-KKGIRKEACWTISNITAGNKEQIQAVIDANIIPPLIQLLSNAEFD 64
            Q IIN  ALP LLNLL+++ KK I+KEACWTISNITAGNKEQIQ VI+ANII PLI LL NAEFD
Sbjct:  218 QYIINHQALPCLLNLLTNNHKKSIKKEACWTISNITAGNKEQIQTVIEANIIGPLIHLLQNAEFD 282          
BLAST of mRNA_Ecto-sp13_S_contig61922.16903.1 vs. uniprot
Match: UPI00201ADF00 (importin subunit alpha-1b isoform X2 n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI00201ADF00)

HSP 1 Score: 97.8 bits (242), Expect = 3.580e-22
Identity = 50/65 (76.92%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    1 QVIINFNALPWLLNLLSSS-KKGIRKEACWTISNITAGNKEQIQAVIDANIIPPLIQLLSNAEFD 64
            Q IIN  ALP LLNLL+++ KK I+KEACWTISNITAGNKEQIQAVI+ANII PL+ LL NAEFD
Sbjct:  269 QCIINHQALPCLLNLLTNNYKKSIKKEACWTISNITAGNKEQIQAVIEANIIGPLVHLLENAEFD 333          
BLAST of mRNA_Ecto-sp13_S_contig61922.16903.1 vs. uniprot
Match: UPI0010A3BC35 (importin subunit alpha-2-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A3BC35)

HSP 1 Score: 97.4 bits (241), Expect = 4.190e-22
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    1 QVIINFNALPWLLNLLSSS-KKGIRKEACWTISNITAGNKEQIQAVIDANIIPPLIQLLSNAEFD 64
            QVIIN  ALP LLNLL+++ KK I+KEACWTISNITAGNK+QIQAV++ANII PL+ LL NAEFD
Sbjct:  237 QVIINHQALPCLLNLLTNNYKKSIKKEACWTISNITAGNKQQIQAVMEANIIGPLVHLLQNAEFD 301          
BLAST of mRNA_Ecto-sp13_S_contig61922.16903.1 vs. uniprot
Match: B9RFG6_RICCO (Importin subunit alpha n=39 Tax=fabids TaxID=91835 RepID=B9RFG6_RICCO)

HSP 1 Score: 97.8 bits (242), Expect = 4.200e-22
Identity = 50/65 (76.92%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    1 QVIINFNALPWLLNLLSSS-KKGIRKEACWTISNITAGNKEQIQAVIDANIIPPLIQLLSNAEFD 64
            Q IIN  ALP LLNLL+++ KK I+KEACWTISNITAGNKEQIQAVI+ANII PL+ LL NAEFD
Sbjct:  320 QCIINHQALPCLLNLLTNNYKKSIKKEACWTISNITAGNKEQIQAVIEANIIGPLVHLLENAEFD 384          
BLAST of mRNA_Ecto-sp13_S_contig61922.16903.1 vs. uniprot
Match: A0A059B3T6_EUCGR (Importin subunit alpha n=3 Tax=malvids TaxID=91836 RepID=A0A059B3T6_EUCGR)

HSP 1 Score: 97.8 bits (242), Expect = 4.200e-22
Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 QVIINFNALPWLLNLLSSS-KKGIRKEACWTISNITAGNKEQIQAVIDANIIPPLIQLLSNAEFD 64
            Q IIN  ALP LLNLL+ + KK I+KEACWTISNITAGNKEQIQAVI+ANII PL+ LL NAEFD
Sbjct:  321 QCIINHQALPCLLNLLTGNYKKSIKKEACWTISNITAGNKEQIQAVIEANIIAPLVHLLQNAEFD 385          
BLAST of mRNA_Ecto-sp13_S_contig61922.16903.1 vs. uniprot
Match: A0A7J8T3N8_GOSDV (Uncharacterized protein (Fragment) n=1 Tax=Gossypium davidsonii TaxID=34287 RepID=A0A7J8T3N8_GOSDV)

HSP 1 Score: 94.4 bits (233), Expect = 6.430e-22
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 0
Query:    1 QVIINFNALPWLLNLLSSS-KKGIRKEACWTISNITAGNKEQIQAVIDANIIPPLIQLLSNAEF 63
            Q IIN   LP LLNLL+++ KK I+KEACWTISNITAGNKEQIQAVI+ANII PL+ LL NAEF
Sbjct:   52 QCIINHQVLPCLLNLLTNNFKKSIKKEACWTISNITAGNKEQIQAVIEANIISPLVHLLQNAEF 115          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig61922.16903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4DTL7_CAMSI1.810e-2380.00Importin subunit alpha n=6 Tax=Ericales TaxID=4194... [more]
A0A1D1Y9X0_9ARAE6.830e-2372.06Importin subunit alpha-1b (Fragment) n=1 Tax=Anthu... [more]
A0A2J6KLC2_LACSA7.270e-2376.92Uncharacterized protein n=1 Tax=Lactuca sativa Tax... [more]
UPI001C68ECFF1.020e-2276.92importin subunit alpha-1a-like n=1 Tax=Lactuca sat... [more]
A0A2J6KPP8_LACSA1.860e-2276.92Uncharacterized protein n=3 Tax=Lactuca sativa Tax... [more]
UPI00201ADF003.580e-2276.92importin subunit alpha-1b isoform X2 n=1 Tax=Ricin... [more]
UPI0010A3BC354.190e-2275.38importin subunit alpha-2-like n=1 Tax=Prosopis alb... [more]
B9RFG6_RICCO4.200e-2276.92Importin subunit alpha n=39 Tax=fabids TaxID=91835... [more]
A0A059B3T6_EUCGR4.200e-2276.92Importin subunit alpha n=3 Tax=malvids TaxID=91836... [more]
A0A7J8T3N8_GOSDV6.430e-2275.00Uncharacterized protein (Fragment) n=1 Tax=Gossypi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 38..69
e-value: 37.0
score: 8.8
coord: 1..36
e-value: 0.29
score: 20.2
IPR000225ArmadilloPFAMPF00514Armcoord: 1..36
e-value: 9.3E-10
score: 38.2
coord: 38..67
e-value: 5.2E-8
score: 32.7
NoneNo IPR availableGENE3D1.25.10.110coord: 1..69
e-value: 7.0E-28
score: 99.5
NoneNo IPR availablePANTHERPTHR23316:SF56coord: 1..67
NoneNo IPR availablePANTHERPTHR23316IMPORTIN ALPHAcoord: 1..67
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig61922contigEcto-sp13_S_contig61922:440..667 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig61922.16903.1mRNA_Ecto-sp13_S_contig61922.16903.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig61922 440..667 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig61922.16903.1 ID=prot_Ecto-sp13_S_contig61922.16903.1|Name=mRNA_Ecto-sp13_S_contig61922.16903.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp
QVIINFNALPWLLNLLSSSKKGIRKEACWTISNITAGNKEQIQAVIDANI
IPPLIQLLSNAEFDIRKVRGVPRYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR016024ARM-type_fold