mRNA_Ecto-sp13_S_contig6192.16902.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6192.16902.1
Unique NamemRNA_Ecto-sp13_S_contig6192.16902.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6192.16902.1 vs. uniprot
Match: A0A6H5JBX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBX7_9PHAE)

HSP 1 Score: 745 bits (1924), Expect = 1.490e-260
Identity = 388/402 (96.52%), Postives = 396/402 (98.51%), Query Frame = 1 
Query:    1 TRTTISLRQRQQQLGGRRSSIGVSMRGEETPCNRAGFLQNGLALLVGSVAVASASPAVAETESDELDEETKQKITQALMEALEGMEGMELTPGGGAQSKDVLKASSDVLPNRSPFEMQYELFKRGMELEDDDDFVGAERQWTEIIENFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYVSRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAQLIGQLLRRYPSYPEMLLAAASVAWGDGELVESQEMFAEAIRLDQRLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI 1206
            TRTT SLRQRQQQLGGRRSSIGVSMRGEETPCNRA FL+NGL+LLVGSVAVASASPAVAET+SDELDEETKQKITQALMEALEGMEG+ELTPGGGAQSK+VLKASSDVLPNRSPFEMQYELFKRGMEL+D DDFVGAERQWTEIIENFNSPNFRAT+PGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQD RVYVSRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAQLIGQLL RYPSYPEMLLAAASVAW DGELVESQEM+AEAIRLDQRLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI
Sbjct:   35 TRTTTSLRQRQQQLGGRRSSIGVSMRGEETPCNRARFLKNGLSLLVGSVAVASASPAVAETDSDELDEETKQKITQALMEALEGMEGVELTPGGGAQSKEVLKASSDVLPNRSPFEMQYELFKRGMELQDADDFVGAERQWTEIIENFNSPNFRATSPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDARVYVSRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAQLIGQLLHRYPSYPEMLLAAASVAWSDGELVESQEMYAEAIRLDQRLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI 436
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BLAST of mRNA_Ecto-sp13_S_contig6192.16902.1 vs. uniprot
Match: D7FIQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ0_ECTSI)

HSP 1 Score: 538 bits (1386), Expect = 5.790e-181
Identity = 280/285 (98.25%), Postives = 283/285 (99.30%), Query Frame = 1 
Query:    1 TRTTISLRQRQQQLGGRRSSIGVSMRGEETPCNRAGFLQNGLALLVGSVAVASASPAVAETESDELDEETKQKITQALMEALEGMEGMELTPGGGAQSKDVLKASSDVLPNRSPFEMQYELFKRGMELEDDDDFVGAERQWTEIIENFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYVSRGDANTLLGQGRDALDNYIRAVNLSPMTPE 855
            TR T SLRQRQQQLGGRRSSIGVSMRGEETPCNRAGFL+NGLALLVGSVAVASASPAVAET+SDELDEETKQKITQALMEALEGMEGMELTPGGGAQSKDVLKASSDVLPNRSPFEMQYELFKRGMELEDDDDFVGAERQWTEIIENFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVY+SRGDANTLLGQGRDALDNYIRAVNLSPMTPE
Sbjct:   34 TRKTTSLRQRQQQLGGRRSSIGVSMRGEETPCNRAGFLKNGLALLVGSVAVASASPAVAETDSDELDEETKQKITQALMEALEGMEGMELTPGGGAQSKDVLKASSDVLPNRSPFEMQYELFKRGMELEDDDDFVGAERQWTEIIENFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTPE 318
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BLAST of mRNA_Ecto-sp13_S_contig6192.16902.1 vs. uniprot
Match: A0A835Z1G2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1G2_9STRA)

HSP 1 Score: 259 bits (661), Expect = 3.820e-74
Identity = 149/335 (44.48%), Postives = 199/335 (59.40%), Query Frame = 1 
Query:  325 LPNRSPFEMQYELFKRGMELEDDDDFVGAERQWTE------------IIENFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYVSRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGH----------------KQKGAQLIGQLLRRYPSYPEMLLAAASVAWGDGELVESQE--------------------------MFAEAIRLDQRLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEAL 1167
            LPNRSPFE+QYE+FK GMELE D+DFV AE+QWTE            IIE   +P +R ++ GN+ LLARA++NRG  R SL + REAILDYSE++ LVP+K EFWL+RG+A+E +AD KV A    + E  R FYESAL+DYD A+VLDP  P+VY+ RGD   LL Q R+ALD Y R + L+P  P+ R   ALAE+Q G+                   GA ++G +L   P  P+MLLA A++AW  GEL ES++                          ++  A+  D RL+D+ +I   LRWP  P+SMV+ LR A +  + + +  L
Sbjct:   31 LPNRSPFELQYEMFKNGMELEGDEDFVAAEKQWTEVNLLSTLHDSLQIIEELETPAWRESSTGNRYLLARAHANRGGARASLGRQREAILDYSEALTLVPDKCEFWLSRGLAYEGLADMKV-AMDGCSQEGVRVFYESALSDYDGALVLDPAKPQVYMLRGDVMALLQQHREALDTYRRGLALNPSKPDLRCCTALAEIQCGNIHLXXXXXXXXXXXXXXNMGAAMVGSILHTQPDRPDMLLAGAALAWEAGELAESEKCRTVXXXXXXXXXXXXXXXXXXXXKTLYRMAVAQDVRLLDDRFIVNALRWPAVPVSMVRVLRKAGTINRLAAVRTL 364
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BLAST of mRNA_Ecto-sp13_S_contig6192.16902.1 vs. uniprot
Match: W7TS28_9STRA (Tetratricopeptide tpr_1 repeat-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS28_9STRA)

HSP 1 Score: 195 bits (495), Expect = 9.050e-51
Identity = 108/264 (40.91%), Postives = 170/264 (64.39%), Query Frame = 1 
Query:  346 EMQYELFKRGMELEDDDDFVGAERQWTEIIENFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYVSRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAQLIGQLLRRYPSYPEMLLAAASVAWGDGELVESQEMFAEAIRLDQRLMDENYIWLILRWPEQPLSMVKALRSASS 1137
            E+++E+ K+G++L     F  AE  +TE+I  F+S ++ + +   K L+A+A+SNRGN R SL +  EA+LDYS SI+L P+  E+W  RG+AFE +AD  +LA  +++   A  FYE+A+ADY+HA+V+DP++ R+Y++ GD  T   +   AL+ Y RA+ L PM+P  R KVAL E++ G+  +G  ++  + RR P + EMLLA+A++ W  G  VE  + + EA+  D RL D++Y+ +   WP   L M+  LR A +
Sbjct:  137 ELRFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDS-DYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADA-LLATREKD---AFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKLREAGT 395
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BLAST of mRNA_Ecto-sp13_S_contig6192.16902.1 vs. uniprot
Match: A0A0G4F1G1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F1G1_VITBC)

HSP 1 Score: 172 bits (436), Expect = 6.560e-43
Identity = 93/265 (35.09%), Postives = 162/265 (61.13%), Query Frame = 1 
Query:  337 SPFEMQYELFKRGMELEDDDDFVGAERQWTEIIENFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYVSRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAQLIGQLLRRYPSYPEMLLAAASVAWGDGELVESQEMFAEAIRLDQRLMDENYIWLILRWPEQPLSMVKALRSA 1131
            S F+ QY LFK G+E     DF  AE  +TEII+++ +P  + +    + +LARAY++RGNTR+SL +  +A++DYS +I+  P++ +FWL R +A E  A++ + +    +++ A  +Y+ AL DY+HA+VL P DPR+Y + G+  TLL     AL+ + +A  L+P    ++A++AL + Q+G  ++   +I  ++RR P Y EM+LA + + W  G   E   ++  +++ +  L+D+ ++   LRWP   +  ++ LR A
Sbjct:  136 SEFQRQYSLFKAGLEETAKFDFKEAEGIFTEIIDSYETPKAKESERA-RFMLARAYTDRGNTRVSLGELNKALVDYSCAIEYAPDEADFWLNRAIACEQKAEQSLTS----SLQFANQWYKEALEDYEHALVLKPSDPRLYANTGEILTLLEDFDAALEKFRQASALAPSNVAYKARIALLDAQLGDVRRSHFIINDIVRRSPDYWEMVLAKSMLDWNVGRFAEGAYLYDISVQENPLLLDDRHLVRDLRWPPYFVEGLRNLRMA 395
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BLAST of mRNA_Ecto-sp13_S_contig6192.16902.1 vs. uniprot
Match: D7FIQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ2_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 1.990e-42
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 1 
Query:  958 MLLAAASVAWGDGELVESQEMFAEAIRLDQRLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI 1206
            MLLAAASVAW DGELVESQEMFAEAIRLD RLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI
Sbjct:    1 MLLAAASVAWSDGELVESQEMFAEAIRLDGRLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI 83
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BLAST of mRNA_Ecto-sp13_S_contig6192.16902.1 vs. uniprot
Match: A0A7S1TRX5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRX5_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.160e-30
Identity = 86/271 (31.73%), Postives = 141/271 (52.03%), Query Frame = 1 
Query:  334 RSPFEMQYELFKRGMELEDDDDFVGAERQWTEIIE-NFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYVSRGDANTLLGQGRDALDNYIRAVNLSPM--TPEFRAKVALAELQVGHKQKGAQLIGQLLRR---YPSYPEMLLAAASVAWGDGELVESQEMFAEAIRLDQRLMDENYIWLILRWPEQPLSMVKALRS 1128
            RS  E QYEL+   M+ E   D  GAE+ W+ +I+ +  SP     +  +K +LARAYS R   R  L K   A++D S ++ L P+  EFW  RG  FE  A R++ A  +  +  A+  ++SA +DYDH ++LDP +  ++   GD   LL     AL +Y+  +  +P         K AL  +Q G    GA+++ ++L       +  +++LA+A+VAW  G   E+  ++  A++ +  L D       L WP + L ++K L++
Sbjct:   82 RSADERQYELYVAAMQCESVADLEGAEKTWSRLIDASVMSP--VKVSGASKTVLARAYSGRSRVRAGLGKLPPALVDISAAVGLEPDIAEFWAQRGAVFE-AASRELHASGE--MAKAKQLFQSACSDYDHGLMLDPNNAALHERSGDVKVLLEDYVGALQSYMHGLENAPAPGNTALAVKFALVVVQTGDDAMGARILSEILEEDGGMNASEDVMLASAAVAWSAGNYAEAMTLYKAALQQNHTLADTEGAVAALGWPPRSLELLKDLKA 347
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BLAST of mRNA_Ecto-sp13_S_contig6192.16902.1 vs. uniprot
Match: A0A0G4I979_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I979_9ALVE)

HSP 1 Score: 104 bits (259), Expect = 4.040e-19
Identity = 62/178 (34.83%), Postives = 94/178 (52.81%), Query Frame = 1 
Query:  616 GVAFEDMADRKVLARADRNVEVARTF----YESALADYDHAVVLDPQDPRVYVSRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAQLIGQLLRRYPSYPEMLLAAASVAWGDGELVESQEMFAEAIRLDQRLMDENYIWLILRWPEQPLSMVKALRSASS 1137
            GVA E +AD         ++   R+F    Y  AL ++DHA+VL P D R+ V+ G+     G    A D Y RA+  SP  P    KVAL E+Q G+   GA L+  +  ++PS+ EM LA   +AW +GE +E   ++  A+R + RL + N++   LRWP   L  ++   +A +
Sbjct:  514 GVAEERVADGAEKETDTFSLPSKRSFAVQWYREALDNFDHALVLQPNDHRLCVNMGELYARTGDFATARDFYRRALLASPSDPALLGKVALTEIQTGNLPVGATLVNAVTNKWPSFWEMQLAKGVLAWNNGEFLEGMTLYKVAVRQEPRLSNLNFVKKELRWPPYMLESLQNFLNAGA 691
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BLAST of mRNA_Ecto-sp13_S_contig6192.16902.1 vs. uniprot
Match: E1ZIJ6_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZIJ6_CHLVA)

HSP 1 Score: 80.9 bits (198), Expect = 2.910e-13
Identity = 54/200 (27.00%), Postives = 92/200 (46.00%), Query Frame = 1 
Query:  493 ARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYVSRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAQLIGQLLRRYPSYPEMLLAAASVAWGDGELVESQEMFAEAIRLDQRLMDENYIWLILRWP 1092
            A  +SN GN      + ++A+ DYS+++ L PE  +  LA G +                   A   ++SA AD D A+ LDP++   +  RG+ +  L     AL ++  A +L+P    +R + A    Q G      + +  + R+Y +Y E   A A+V W  G+   +++ F  A+  D+R  +  +I    RWP
Sbjct:   33 ASGWSNLGNVHQQQGQAQQAVEDYSKAVALAPEVSDCVLALGDSSR-----------------ALDLWQSAAADCDRAIELDPKEYAAWFDRGNIDLRLQDYAAALTDFGTAADLAPGLGGYRLRQATLMFQQGDVDGARRTMQGVTRKYSNYAEAHAALAAVEWSRGDAERAEQQFYRAVAQDERWNNMGWILENTRWP 215
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6192.16902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JBX7_9PHAE1.490e-26096.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIQ0_ECTSI5.790e-18198.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z1G2_9STRA3.820e-7444.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TS28_9STRA9.050e-5140.91Tetratricopeptide tpr_1 repeat-containing protein ... [more]
A0A0G4F1G1_VITBC6.560e-4335.09Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
D7FIQ2_ECTSI1.990e-4297.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1TRX5_9STRA4.160e-3031.73Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A0G4I979_9ALVE4.040e-1934.83Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
E1ZIJ6_CHLVA2.910e-1327.00Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6192contigEcto-sp13_S_contig6192:2809..8351 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score506.1
Seed ortholog evalue1.4e-140
Seed eggNOG ortholog2880.D7FIQ0
Model size3066
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.Tetratricopeptide repeat
EggNOG OGs2D3S9@1,2SSJM@2759
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-27_000610.1
Cds size1137
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6192.16902.1prot_Ecto-sp13_S_contig6192.16902.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6192 4666..8279 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463862.3592005-UTR-Ecto-sp13_S_contig6192:2808..46651681463862.3592005-UTR-Ecto-sp13_S_contig6192:2808..4665Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6192 2809..4665 -
1681463862.4674094-UTR-Ecto-sp13_S_contig6192:8279..83511681463862.4674094-UTR-Ecto-sp13_S_contig6192:8279..8351Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6192 8280..8351 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463862.3734808-CDS-Ecto-sp13_S_contig6192:4665..48961681463862.3734808-CDS-Ecto-sp13_S_contig6192:4665..4896Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6192 4666..4896 -
1681463862.3853834-CDS-Ecto-sp13_S_contig6192:5460..55831681463862.3853834-CDS-Ecto-sp13_S_contig6192:5460..5583Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6192 5461..5583 -
1681463862.3984-CDS-Ecto-sp13_S_contig6192:6090..62011681463862.3984-CDS-Ecto-sp13_S_contig6192:6090..6201Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6192 6091..6201 -
1681463862.413936-CDS-Ecto-sp13_S_contig6192:6705..68191681463862.413936-CDS-Ecto-sp13_S_contig6192:6705..6819Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6192 6706..6819 -
1681463862.427844-CDS-Ecto-sp13_S_contig6192:7252..76541681463862.427844-CDS-Ecto-sp13_S_contig6192:7252..7654Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6192 7253..7654 -
1681463862.442459-CDS-Ecto-sp13_S_contig6192:7872..79831681463862.442459-CDS-Ecto-sp13_S_contig6192:7872..7983Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6192 7873..7983 -
1681463862.457643-CDS-Ecto-sp13_S_contig6192:8234..82791681463862.457643-CDS-Ecto-sp13_S_contig6192:8234..8279Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6192 8235..8279 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6192.16902.1

>prot_Ecto-sp13_S_contig6192.16902.1 ID=prot_Ecto-sp13_S_contig6192.16902.1|Name=mRNA_Ecto-sp13_S_contig6192.16902.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=379bp
MRGEETPCNRAGFLQNGLALLVGSVAVASASPAVAETESDELDEETKQKI
TQALMEALEGMEGMELTPGGGAQSKDVLKASSDVLPNRSPFEMQYELFKR
GMELEDDDDFVGAERQWTEIIENFNSPNFRATNPGNKVLLARAYSNRGNT
RLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRN
VEVARTFYESALADYDHAVVLDPQDPRVYVSRGDANTLLGQGRDALDNYI
RAVNLSPMTPEFRAKVALAELQVGHKQKGAQLIGQLLRRYPSYPEMLLAA
ASVAWGDGELVESQEMFAEAIRLDQRLMDENYIWLILRWPEQPLSMVKAL
RSASSAPKGSGLEALGLKTLLSMPREVI*
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mRNA from alignment at Ecto-sp13_S_contig6192:2809..8351-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6192.16902.1 ID=mRNA_Ecto-sp13_S_contig6192.16902.1|Name=mRNA_Ecto-sp13_S_contig6192.16902.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6192:2809..8351- (Ectocarpus species13 EcNAP12_S_4_19m)
ACGAGGACGACGATATCTCTCCGGCAACGACAACAGCAGCTCGGAGGGCG
ACGAAGCTCGATTGGTGTCAGCATGAGGGGAGAGGAAACACCGTGTAATC
GGGCAGGATTCCTCCAGGTCAGCACTGCTGGAAGGTCGCAGACCCAGAGT
TGGCGGCCAGCAAGCGTCATGAAAGGATCCCTACGCGATTTTAGAGTCGT
CTAGCACAGCCTGGGGCCCGCGATTATTCTTTTGAAGCACGGGTTCGCGA
CTGCACCCCCCCACCTTTTATTGACGTCACATGCCGCGCGCAACGGCCGT
AGTGTCGACCCCCCCTCACTCCCCCCGGATCATCCACCCAACGCTCCACG
CCGTCGACAATTGAGCAGAACGGACTTGCGTTGCTCGTCGGCTCGGTAGC
GGTAGCGTCAGCGTCTCCAGCCGTGGCGGAGACGGAGTCGGACGAACTGG
ACGAAGAAACCAAGCAGAAGATCACCCAGGTAATAATTCTACAACCTTTT
GGGGCCGCGATGTTTTCGCCGGCTCCCTGAGCAAGCGATACATGCCTCTT
TGTCTCTCGAGGAAACTCGGTTTGTTGGCACCAGAGGGACAGCCAGTGAC
GGCGTCAACATGTTGGGCGGCCCAGACTGACTTTTGTGTTTTTTTCAATT
GCGACGACCCCGGTATGTTTCGTTGGTGCATGCCCCCCCCCCCCCAGGCG
TTGATGGAAGCTCTGGAGGGCATGGAAGGCATGGAGCTCACGCCGGGGGG
AGGGGCGCAGTCCAAGGACGTCCTCAAGGCGTCTTCGGATGTGCTGCCTA
ACAGGAGCCCGTTCGAGATGCAGTACGAGCTGTTCAAGCGAGGGATGGAA
CTCGAAGACGACGACGACTTCGTCGGCGCGGAGAGGCAGTGGACCGAGAT
CATCGAGAACTTCAACAGCCCAAATTTCCGGGCGACCAACCCCGGGAATA
AGGTGCTGCTGGCCAGGGCGTACAGCAACCGCGGCAACACGAGGCTCTCG
CTGCAGAAGACGAGGGAGGCCATCCTGGACTACAGCGAGTCCATCGACCT
CGTCCCGGAGAAGGGGGAGTTCTGGCTGGCTCGCGGGGTGGCGTTCGAGG
TGACTAATGCGTTTTTTTTCCGGAGGAGAGTGCTCGTGGGAGAGAAGAGG
ATAGGGAGGAACGGGGTCGGCACACACGGCCGGTTTTCACTTGTGGTAGC
GGGTGTTTTGGCTGTGCCGCTTGTGACAGATACTTGTGGTGGCCAGGGAG
AGATGCATGTGCAAGCACGGATCAAGTTGTCGCGTTTCGGAGAGGTTTGC
GTCGCCAGTTACGAAAGGAGGAGCGACATCGTTGACGGGACGATCGATGG
AAACGACGTCGACTTGTGCACTCACCGCTCTCGGGGGGCGTCGATTCCGC
TACGGTAGCAGCCTCCACGTGGACCCCCCGCCTCCAGAATTTAGGACGCG
TTTTTTCTTCTCTCAAACGCCATCATTTCTCCTTTCTCCTTGTGTGTTCT
GTCCCTCGGGTGCTTTGCCCACGAAACCACAGGACATGGCCGATCGCAAG
GTGCTGGCACGGGCAGACCGTAACGTGGAGGTGGCACGCACATTCTACGA
GAGCGCTCTTGCTGACTACGATCACGCTGTCGTATTGGACCCACAGGTAG
AGCCAGCCAACCGTGCGTGTGGACACGTACAGCCTGGGTGGTGTACGAAT
TTTCGTCGTATTCTCCTTCCCCTGTCGTGTGCGTCCCTGACTTGTTTTTT
CACGGCACTCGCGTTATCTCCGTACGCGTTTTTGTTTGACAGCAGTCGTT
TAGATCGGACTAGGACAGCCATATCGCCTTCCCCCCCCCCCTCTCTCTCT
CTCGCTCTTCCTCTCTCGTCGCGCTCGGAAGTACAGTCAGCTGTGCGAGG
AAGATCATATCCGATACCTGCCTTGATTAGATTCGAGCCCGTGCCTCTCT
CGCGCACCGGGATATCGAACGACTACCTGGACCGGCTGCACAGGTCCACA
CAAACACCCTAGACTCTCGCCTCTGTCCGGTCTTTCGGCCCTTTCATCCA
GCCTCTCGCTCTCCATCGTCCCGATTCCTCTCACGGTGCAAATGTGTACC
TATCTCTCGTGCCGAACGGCTGTTGTCACAAAACGCCCCCAACACTGCAG
GACCCCCGTGTGTACGTCAGTCGTGGCGACGCAAACACCCTCCTGGGCCA
GGGACGCGATGCGCTCGACAACTACATCCGCGCGGTCAACCTAAGCCCCA
TGACCCCCGAGGTCAGTTCAGTTCTGGACGCGAGTTTCCGCCTTGCTTCC
TGGCTTTTGTCCTTCATTTGTCGATCTTAATCGGCGTTGGCAGGGCGCAC
ACGCCGCGGGCGTGTCGGCTATGGTGTCGGGAAGCAACATGAAATGCAAA
CTGTGTAGCACCAGCCTGTTGGCAACTTGAGCCAGTCGTCGATGGAGGGT
TGGCGGCAGCTCATGTTCGTTGCGCGGGTGTGCGAATCGTTCGGCCTGTT
TTCCTGGAACTGTGGGCCGTAGACACCCTCACATACTCGCGGGGCCCCAC
ACAGGTAGTGGCCTTTGGAAGCATTTCCCACTTAAAGCTGCACCGTCTTT
CATTGGTCAGCGGTTTGGGTGGTCGATGCTTGTTGGCACACATACATTTG
CTAATGGCTGCTGCCTTGTCATTTGCCGGCCGATTGGAGCGGTCGATCTC
TCTTAAGACATACACACACACGGCACGACCCTTCTTGTTATTTGCTTTGT
GTTTATTCTTCTTTTCAGTTTCGAGCGAAGGTGGCGCTGGCGGAGCTTCA
GGTAGGGCACAAGCAGAAGGGCGCGCAACTCATCGGGCAGCTGTTGCGTC
GTTACCCGAGCTACCCGGAAATGCTGCTGGCGGCCGCGTCGGTAAGGTCT
CGCTCGCCATATTTGTTGCTGTCGTTGTCGCTACTCCCGCTGCTGCTTTT
TTGTGTTGTCGGGGTTTCTCTCGTTTTTTCTATTTTCTCCCAAAATTCTG
GGCGAACACTAATATACGAATCCGGCATAGCGGCGCCTCGGGTAGCTGAA
ACACCGCGAGCCTAATATGTCATCGGCGTAGCAAGGGAGGGATTGGGACT
TCGATTACCAAGAATGAAGTTGTGCCGTCCGCTTTTTGGTTGTGCTTCAT
GTGTCCGGTTTTATTAACGTTCATGTGGTGCCTTTAACCTTGTCCGATTT
TGTCGTTGAAATTTGGAACAGTTTGGGCGTATTGCCGGTGCTTGAAACAA
CGTCCACCTCCGTTGAGATTCTTGGTGAATGAAGTACTTCTATGTCTCTG
AAGGCGCTTCGCTTTGTACGTGCGGGTCTTGGCGAAAGATACTTCGGGTA
AAAAGAAAGAGATCCAAAGAACGTGGCGCCTTTTTGCCGTCGCGGGTGTT
TTTGCAGTATTCATTGAGCGCCCCCTCCCTTCTTCTGGTATAATGACGAA
ACCAGGTGGCCTGGGGCGACGGCGAGTTGGTAGAGAGCCAGGAGATGTTC
GCCGAAGCGATTCGCTTGGACCAGCGCCTCATGGACGAGAACTACATCTG
GCTCATCCTCCGCTGGCCGGAGCAGCCGCTCAGTATGGTGAAAGCTCTCC
GCTCGGCCTCCAGCGCGCCGAAGGGGAGCGGCCTCGAGGCCCTGGGCCTA
AAGACGCTCTTGTCTATGCCCCGTGAGGTCATTTGACAAGGTTTCGAGCC
TCTCGACCTCGGCGTCTTTGTCCTGATCTGACCGGATGCGGTTCGATTTT
TTTATCGGATCTGGTCACGTCGCACGGTTGCCTAATGCCAATTTGACCTG
AGGTGCAGTCTGCCTTTGGTCTACGCAAGCCGGCTCCGCAAGCTGGTGAT
GCCTGTTGCTGAGAAGTGGGCCTAGTTGATCAGGGCGCCGGCTTCTGGTT
TACCGAAGACGCTACGCGGGGTGTTAATGAGAAGACGATTTGCGAGGAGG
GGGGATGCGGCTTTTGGCAGAGTACTGGCTGGTAGATATTGGGGATTAGA
AGTGTGGGAGGAAGATGGCCGAACATCGCAGCGGTGACGAGCATTCTCAG
GCCCCATATTGCAGCTAGGGATTACGCGAGAGGGGCAGGAGAGGAACAGG
GGAGTTCCTTGTTGAAGGTGGCAGCTGAGCTGCTCCCATTCGCATGGACC
GGTGTTTTCACGGCCGTACCACACGGACGGACAGAGAGCGTCTTTGTGAA
TACTGTATAAAGAGGGGTTTGTATCGTGCGCGGTCCTACACGTTCTCGGA
TGTACGTTCGATCGATTTGAAACCGTGCGGGTGGTTCGTGTGAAACAGGT
ATAACAAAATATTGTTGAGTCGTAAAGCGAGGCACACGCCAGATGTTAGT
AGCGCGCGGAAGGACAACCAAGCGCACCTGCGTGGATGGCGACGTGTCGC
TTTGGACTTGTTTTGAGCTTTGGTCGGGATTGCGAGAAAAGGGGCAGCCG
CTCATCAAAGACGTTGGGTCGTTCGGCTTTGGTAGAAAACATACCCAGCC
GCTACGCGACGGCCGAGAGGACACATGAGACGTAATTTGATGGCGTGTAT
GTTGGGCATCCCTGGGTTTGACTGATGATGTGGAGAGCATAGGGCCTGTG
GTATTGTTGCAAATCCACACGACGCAACATTGGACACAAAACTTCCGTCG
TATTGCCGTCGAAATGCATTTTTCCTTGCCAAGGATTCTGAGCAACGCAA
GCGGTGAAGACTCTTCGCCAACAGCCCTTGGCTGCATATGAAAGCGAGGC
ACAAGTTGGGCTGAAAGTAGCAAATTGCAGCTGTGTGTTGGGGGGTAAAT
TCGGTGTAGTGTGCGTTTGGGCGCGTTGCACAATACACATAATGCGAGCT
TTGACGACCGGGTGGCGAATTGGTGAATGAGGCGCTGGTGTGAGAGGGCA
TGCTTGGACCTCTCGTGTACTTGCTCACTTCATCGAGAGCTGCTGTTGCG
CTGGCACGATTCAGATTGGGCGTGTGAGAACTAGGTCGTGTGGCAGTAGG
TCGGTGTCGATGGCAGTCTGAGGGTGTGCGGTGCCTTGAATCACCAGCCT
GGTTGTTCTGGGATGTACTAGTGTGTTGTGTGATGTCACGGGTGTAATGT
TGAATGTGTATTTGGGTGAAAGAGTGTTCGCAGCAGCAAGTCAATTGAGA
TTAATGATTGCGCGATGTGGGTTGGTACGGCATCTGTCGTCTGTATTAAA
ATGGGTTTCTGTTTCCGGGCTACCTTTGCACGTGGCTACCTTTGCCTTGG
ATCACCCGGTTTTCCCTTGAGATTGTTAGCACCACGTCGTTTGTTCTCCC
TGTCTACTTTGTTTCTCGCGGTAGCGGTATTGGCGCTCTCCAGAGTTTTG
TTTCTGGGAGGGATGAACGCACGGAAATGGCAAGAGATGTGCCGCTGATG
GTCTTGCTTGGTCCTGCGTGTCGTTGGAGCTCTTGGATATGTTGGAAAAG
ACGGGTGCTTCCTCGAACCTCACGTTGCAGGGTTGCACTCTGGTCTGTCG
TAAAATTGAACTGAAAGAGTGTGCAAACGGTGGTGAGAAAAAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6192:2809..8351-

>mRNA_Ecto-sp13_S_contig6192.16902.1 ID=mRNA_Ecto-sp13_S_contig6192.16902.1|Name=mRNA_Ecto-sp13_S_contig6192.16902.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1137bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6192:2809..8351- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGGGGAGAGGAAACACCGTGTAATCGGGCAGGATTCCTCCAGAACGG
ACTTGCGTTGCTCGTCGGCTCGGTAGCGGTAGCGTCAGCGTCTCCAGCCG
TGGCGGAGACGGAGTCGGACGAACTGGACGAAGAAACCAAGCAGAAGATC
ACCCAGGCGTTGATGGAAGCTCTGGAGGGCATGGAAGGCATGGAGCTCAC
GCCGGGGGGAGGGGCGCAGTCCAAGGACGTCCTCAAGGCGTCTTCGGATG
TGCTGCCTAACAGGAGCCCGTTCGAGATGCAGTACGAGCTGTTCAAGCGA
GGGATGGAACTCGAAGACGACGACGACTTCGTCGGCGCGGAGAGGCAGTG
GACCGAGATCATCGAGAACTTCAACAGCCCAAATTTCCGGGCGACCAACC
CCGGGAATAAGGTGCTGCTGGCCAGGGCGTACAGCAACCGCGGCAACACG
AGGCTCTCGCTGCAGAAGACGAGGGAGGCCATCCTGGACTACAGCGAGTC
CATCGACCTCGTCCCGGAGAAGGGGGAGTTCTGGCTGGCTCGCGGGGTGG
CGTTCGAGGACATGGCCGATCGCAAGGTGCTGGCACGGGCAGACCGTAAC
GTGGAGGTGGCACGCACATTCTACGAGAGCGCTCTTGCTGACTACGATCA
CGCTGTCGTATTGGACCCACAGGACCCCCGTGTGTACGTCAGTCGTGGCG
ACGCAAACACCCTCCTGGGCCAGGGACGCGATGCGCTCGACAACTACATC
CGCGCGGTCAACCTAAGCCCCATGACCCCCGAGTTTCGAGCGAAGGTGGC
GCTGGCGGAGCTTCAGGTAGGGCACAAGCAGAAGGGCGCGCAACTCATCG
GGCAGCTGTTGCGTCGTTACCCGAGCTACCCGGAAATGCTGCTGGCGGCC
GCGTCGGTGGCCTGGGGCGACGGCGAGTTGGTAGAGAGCCAGGAGATGTT
CGCCGAAGCGATTCGCTTGGACCAGCGCCTCATGGACGAGAACTACATCT
GGCTCATCCTCCGCTGGCCGGAGCAGCCGCTCAGTATGGTGAAAGCTCTC
CGCTCGGCCTCCAGCGCGCCGAAGGGGAGCGGCCTCGAGGCCCTGGGCCT
AAAGACGCTCTTGTCTATGCCCCGTGAGGTCATTTGA
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