prot_Ecto-sp13_S_contig6191.16900.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6191.16900.1
Unique Nameprot_Ecto-sp13_S_contig6191.16900.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length172
Homology
BLAST of mRNA_Ecto-sp13_S_contig6191.16900.1 vs. uniprot
Match: D7FU55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU55_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 5.300e-45
Identity = 108/177 (61.02%), Postives = 119/177 (67.23%), Query Frame = 0
Query:    2 EALKNLSAKLSGRKLLLMPKTSASGVFSREFLTKDLMKLYARVADTTASLALACVSLRFGGKTPALLATLLTGARALSVASAASTSCLWAETTTAD---IGSS---GTTSVPRDRTDEATWTLLGWITNIGAATAVAWIVWLSALWVLATLAIWARSMSIRRRSGSSGSPNTQAVGA 172
            ++ KN+  K SGRKLLLM               KDL K+YA V  TTAS  +   SLRFGGKTPALLA+L+TGA A S  SAASTS L A TT+AD   IGS    GTTSVP DRTD+ATWTLL WI +IG A  VAWIVWLS LWVL  L +WA SMS  RR GSSGSPN QA GA
Sbjct:   58 KSFKNVFTKSSGRKLLLM--------------AKDLEKMYAYVEGTTASALIFYGSLRFGGKTPALLASLVTGAAASSFVSAASTSGLSAGTTSADMSDIGSGKKGGTTSVPGDRTDDATWTLLVWIISIGVAMVVAWIVWLSPLWVLLNLLVWAESMSRSRRRGSSGSPNIQATGA 220          
BLAST of mRNA_Ecto-sp13_S_contig6191.16900.1 vs. uniprot
Match: A0A6H5JVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI1_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.720e-39
Identity = 100/167 (59.88%), Postives = 110/167 (65.87%), Query Frame = 0
Query:    1 MEALKNLSAKLSGRKLLLMPKTSASGVFSREFLTKDLMKLYARVADTTASLALACVSLRFGGKTPALLATLLTGARALSVASAASTSCLWAETTTADIGSSGTTSVPR-DRTDEATWTLLGWITNIGAATAVAWIVWLSALWVLATLAIWARSMSIRRRSGSSGSPN 166
            MEA KN S K+S  +           VFSR  LTK   KLYA V  TTA LAL   SLR GGK PALLATL+  A ALSV SAA+TSCL A  TTAD GSSGTTSV   D TD ATWTL  W+ NIGAATA+A  +W+ ALWVL TLA WAR  S  R +G+S SPN
Sbjct:  118 MEAAKNFSTKISDGR-----------VFSRGLLTKGFEKLYAHVTVTTAFLALGYASLRIGGKAPALLATLVMKAGALSVVSAATTSCLSAGATTADTGSSGTTSVLHGDVTDNATWTLFSWMANIGAATALARSMWVFALWVLVTLAFWARRRSRSRNNGASVSPN 273          
BLAST of mRNA_Ecto-sp13_S_contig6191.16900.1 vs. uniprot
Match: D7FNC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNC7_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 4.890e-35
Identity = 91/147 (61.90%), Postives = 101/147 (68.71%), Query Frame = 0
Query:   21 KTSASGVFSREFLTKDLMKLYARVADTTASLALACVS-LRFGGKTPALLATLLTGARALSVASAASTSCLWAETTTADIGSSGTTSVPRDRTDEATWTLLGWITNIGAATAVAWIVWLSALWVLATLAIWARSMSIRRRSGSSGSPN 166
            KTSA  VFSR  LTK   KLY   ADTTAS AL   S LRFGG TPALLATL+T A  LSVASAA+TSCL A TT ADIGS  TT VP D  D+ATW L   +   G AT +A I+ +SAL VLATLA WA S S  R++G+S SPN
Sbjct:  101 KTSAGRVFSRGLLTKGFEKLYTHAADTTASFALGYFSSLRFGGNTPALLATLVTAAGTLSVASAATTSCLSAGTTVADIGSRATTDVPGDLADDATWALFSLLMKFGGATVLARIMQISALSVLATLAFWATSRS--RKNGASVSPN 245          
BLAST of mRNA_Ecto-sp13_S_contig6191.16900.1 vs. uniprot
Match: A0A6H5J5K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5K9_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.170e-33
Identity = 82/126 (65.08%), Postives = 96/126 (76.19%), Query Frame = 0
Query:   43 RVADTTASLALACVSLRFGGKTPALLATLLTGARALSVASAASTSCLWAETTTADIGSSGTTSVPRDRTDEATWTLLGWITNIGAATAVAWIVWLSALWVLATLAIWAR--SMSIRRRSGSSGSPN 166
            +V DTTASLAL   SLR GGKTPALL+TL+TGA ALSV +AA+TSC  A  T+A+IGSS TTSVP D  D+ATW L  WITNIGAATA+AW + + ALWVLATLA WAR  + S  R+  +S SPN
Sbjct:  175 KVCDTTASLALRYASLRLGGKTPALLSTLVTGAGALSVVAAATTSCFSAGMTSAEIGSSKTTSVPGDLADDATWALFSWITNIGAATALAWSMRVFALWVLATLACWARRRNRSRSRKKRASVSPN 300          
BLAST of mRNA_Ecto-sp13_S_contig6191.16900.1 vs. uniprot
Match: A0A6H5KZU3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZU3_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 3.160e-22
Identity = 72/121 (59.50%), Postives = 81/121 (66.94%), Query Frame = 0
Query:    2 EALKNLSAKLSGRKLLLMPKTSASGVFSREFLTKDLMKLYARVADTTASLALACVSLRFGGKTPALLATLLTGARALS-VASAASTSCLWAETTTAD---IGSSGTTSVPRDRTDEATWTL 118
            ++ KN+  K SGRKLLLM               KDL K+YA V DTTA+  +   SLRFGGKTPALLA+L+TGA A S V SA STS L   TT+AD   IGSSGTTSVP DRTDEATWTL
Sbjct:  188 KSFKNVFTKSSGRKLLLM--------------AKDLEKMYAYVEDTTAAALVFYASLRFGGKTPALLASLVTGAAAASSVVSANSTSSLSPGTTSADMSDIGSSGTTSVPGDRTDEATWTL 294          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6191.16900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FU55_ECTSI5.300e-4561.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVI1_9PHAE1.720e-3959.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNC7_ECTSI4.890e-3561.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J5K9_9PHAE1.170e-3365.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZU3_9PHAE3.160e-2259.50Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 150..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..60
NoneNo IPR availableTMHMMTMhelixcoord: 128..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6191contigEcto-sp13_S_contig6191:4242..8139 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6191.16900.1mRNA_Ecto-sp13_S_contig6191.16900.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6191 3544..8139 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6191.16900.1 ID=prot_Ecto-sp13_S_contig6191.16900.1|Name=mRNA_Ecto-sp13_S_contig6191.16900.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=172bp
MEALKNLSAKLSGRKLLLMPKTSASGVFSREFLTKDLMKLYARVADTTAS
LALACVSLRFGGKTPALLATLLTGARALSVASAASTSCLWAETTTADIGS
SGTTSVPRDRTDEATWTLLGWITNIGAATAVAWIVWLSALWVLATLAIWA
RSMSIRRRSGSSGSPNTQAVGA
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