prot_Ecto-sp13_S_contig619.16897.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig619.16897.1
Unique Nameprot_Ecto-sp13_S_contig619.16897.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length518
Homology
BLAST of mRNA_Ecto-sp13_S_contig619.16897.1 vs. uniprot
Match: A0A6H5JLI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLI6_9PHAE)

HSP 1 Score: 738 bits (1906), Expect = 1.810e-257
Identity = 449/511 (87.87%), Postives = 462/511 (90.41%), Query Frame = 0
Query:    1 MLLHRRKCEVRVCQARHLVPKGRKRNGDDKPAVLVADAVWALMSIDGKHNTTESCRNIEHPSWERVAVFDLNLCRAAEGIARGAPAKPPRDSNPTAGAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKRSPSSPLNPFALAEAETQSLNPFASNFVPPAAAPLSPPXXAAASPRSKSPCXXXXXXXXPVLRASMVLHLRMLHGRLRSKEVLGDVAVDLVPLIRSGGDRLATDRLEWLGEEDGAPLLPLDDGDAGAITTPXXXPLVAVDTWVSLRQGTAELRVQILIKPPREPASSNVGFQRAQVGGDEAWAAAFEALSADGLVKTSLDLEQRSLDERLLDVQETYDFSAGSGYREGKPDEDEGARNLDQGKEGDPKTPEWPACEPEAARLRRDMQLAALRDRRQSIAWAEKLGSSADLRDALRRPPPFSARSSQGPAAGGKRAKPTAAPSPFAASPMFRDLKELVAQGIPPALRSANHPPSAGAAGARS 511
            MLLHRR+CEVRVCQARHLVPKGRKRNGDDKPAVLVADAVWALMSIDG HNTTESCRNIEHPSWERVAVFDLNLCRAAEGIARGAP KPPRDSNPTAGA  XXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXX   S    LNPFA+AEAETQ    FASNFVPPAA PLS P   AASPRSKS C         VLRASMVLHLR+LHGRLRSKEVLGDVAVDLVPL+RSGGDRLATDRLEWL EEDGAPLLPL +GDAG ITT    P+VAVDTWVSLRQGTAELRVQIL+K PREPASSNVG QRAQVGGDEAWAAAF+ALSADGLVKTSLDLEQRSLDERLL+VQETYDFSAGSGYREGKPDEDEGAR+LDQGKEGDPKTPEWPACE EAARLRRDMQLAALRDRRQSIAWAEKLGSSADLR+ALRRPP FSARSSQGPAAGGKRAK TA P+PFAASP+FRDLKELVAQGIPPALRSANHPPSAGA GARS
Sbjct:    1 MLLHRRQCEVRVCQARHLVPKGRKRNGDDKPAVLVADAVWALMSIDGVHNTTESCRNIEHPSWERVAVFDLNLCRAAEGIARGAPVKPPRDSNPTAGAXXXXXXXXXXXXXXXXXFERPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS----LNPFAVAEAETQXXXXFASNFVPPAATPLSSPPPQAASPRSKSSCPPAAAAW--VLRASMVLHLRVLHGRLRSKEVLGDVAVDLVPLLRSGGDRLATDRLEWLEEEDGAPLLPLGNGDAGVITT-HPPPVVAVDTWVSLRQGTAELRVQILMKTPREPASSNVGSQRAQVGGDEAWAAAFDALSADGLVKTSLDLEQRSLDERLLEVQETYDFSAGSGYREGKPDEDEGARDLDQGKEGDPKTPEWPACESEAARLRRDMQLAALRDRRQSIAWAEKLGSSADLREALRRPPSFSARSSQGPAAGGKRAKATAVPTPFAASPVFRDLKELVAQGIPPALRSANHPPSAGATGARS 504          
BLAST of mRNA_Ecto-sp13_S_contig619.16897.1 vs. uniprot
Match: A0A836CAD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAD2_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.270e-8
Identity = 47/132 (35.61%), Postives = 68/132 (51.52%), Query Frame = 0
Query:  218 LHLRMLHGRLRSKEVLGDVAVDLVPLIRSGGDRLATDRLEWL--------GEED-----GAPLLPL-------------------DDGDAGAITTPXXXPLVAVDTWVSLRQGTAELRVQILIKPPREPASS 317
            LHLR+    L SK++LG+V VD+  L+ +GG  L TDR+ +         GEED     GA ++PL                   +   A A+ +      +AVDTWV+LRQG  ELRVQ+L++P    A++
Sbjct:  180 LHLRVFSDSLVSKDLLGEVTVDVAALVATGGALLVTDRIGYTDSGGAGSRGEEDDGDSSGAFMVPLALAASPTPPRSHHSERVSANGAAAAAVASAVDFEPLAVDTWVALRQGDGELRVQVLVRPDPSAATA 311          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig619.16897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLI6_9PHAE1.810e-25787.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAD2_9STRA2.270e-835.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig619contigEcto-sp13_S_contig619:11541..15878 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig619.16897.1mRNA_Ecto-sp13_S_contig619.16897.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig619 11541..15940 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig619.16897.1 ID=prot_Ecto-sp13_S_contig619.16897.1|Name=mRNA_Ecto-sp13_S_contig619.16897.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=518bp
MLLHRRKCEVRVCQARHLVPKGRKRNGDDKPAVLVADAVWALMSIDGKHN
TTESCRNIEHPSWERVAVFDLNLCRAAEGIARGAPAKPPRDSNPTAGAAV
ASSSASSSSRNSSATFERPSAVAAAVPARKNKAAAAAAAAAATPAAAAVK
RSPSSPLNPFALAEAETQSLNPFASNFVPPAAAPLSPPPPAAASPRSKSP
CPPAPAAAAPVLRASMVLHLRMLHGRLRSKEVLGDVAVDLVPLIRSGGDR
LATDRLEWLGEEDGAPLLPLDDGDAGAITTPPPPPLVAVDTWVSLRQGTA
ELRVQILIKPPREPASSNVGFQRAQVGGDEAWAAAFEALSADGLVKTSLD
LEQRSLDERLLDVQETYDFSAGSGYREGKPDEDEGARNLDQGKEGDPKTP
EWPACEPEAARLRRDMQLAALRDRRQSIAWAEKLGSSADLRDALRRPPPF
SARSSQGPAAGGKRAKPTAAPSPFAASPMFRDLKELVAQGIPPALRSANH
PPSAGAAGARSPAAGAAG
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