mRNA_Ecto-sp13_S_contig6188.16891.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6188.16891.1 vs. uniprot
Match: D7G835_ECTSI (Similar to peroxisomal n1-acetyl-spermine/spermidine oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G835_ECTSI) HSP 1 Score: 605 bits (1561), Expect = 1.410e-214 Identity = 318/370 (85.95%), Postives = 328/370 (88.65%), Query Frame = 1
Query: 22 IFAANRLGGRIFTHEESRSHXXXXXXXXXXXXXXXXXXXXSGGIPSRPLELGAQWLHGTVGNPLFDFCVEEGIFDSQEGRIELAMAKRAYAARDVQARRPDGTQVSRREFVRHSEAWSQAVLEAENLYAASLAAEAETAAEGGNAEDQXXXXRRNIEPKRLEAIAMTTVPNSPRQDPQVNGISHNVNNGGSTPNAAISADSRREDRVGAFLHRRVREILRAGGGSSDSCGIDEAILGYLVRKQHAVEGCDDLNVVSVAGYGMYEELKGGDVRVPGGFSRVVEALTAKISPERIRLQSPVTRVQWASQGQQE-RRDSPFAESHPCVVEYTTRRHSSGGIDVGGEQGHSDAVSTMRIRCKRVLVTVGLGVLK 1128
IFAA+RLGGRIFTHEESRSH GG+PSRPLELGAQWLHGTVGNPLFDFCVEEGIFDSQEGRIELAMAKRAYAARDVQARRPDGTQVSRREFVRHSEAWSQAVLEAE LYAASLAAEAETAAEGGNAEDQ R+N++PKRLEA A TVPNSPRQDP V GIS NVNNGGSTPN +SADSRREDRVGAFLH RVREILRAGGGSS CGIDE ILGYLVRKQHAVEGCDDL+VVSVAGYGMYEEL+GGDVRVPGGFSRVVEAL AKISPERIRLQSPVTRVQWASQGQQE RR+SPFAESHPCVVEYTTRRHSSGGIDVGGEQ HSD VSTMRIRC+RVLVTVGLGVLK
Sbjct: 88 IFAADRLGGRIFTHEESRSHHHPSPHSSCEEGVTTATNAC-GGVPSRPLELGAQWLHGTVGNPLFDFCVEEGIFDSQEGRIELAMAKRAYAARDVQARRPDGTQVSRREFVRHSEAWSQAVLEAETLYAASLAAEAETAAEGGNAEDQQQQQRQNLDPKRLEAAATITVPNSPRQDPHVKGISDNVNNGGSTPNVVMSADSRREDRVGAFLHLRVREILRAGGGSSGGCGIDEDILGYLVRKQHAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFSRVVEALAAKISPERIRLQSPVTRVQWASQGQQEERRESPFAESHPCVVEYTTRRHSSGGIDVGGEQDHSDLVSTMRIRCRRVLVTVGLGVLK 456
BLAST of mRNA_Ecto-sp13_S_contig6188.16891.1 vs. uniprot
Match: A0A6H5JI18_9PHAE (PAO protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI18_9PHAE) HSP 1 Score: 603 bits (1554), Expect = 5.420e-209 Identity = 318/375 (84.80%), Postives = 328/375 (87.47%), Query Frame = 1
Query: 13 LYAIFAANRLGGRIFTHEESRSHXXXXXXXXXXXXXXXXXXXXSGGIPSRPLELGAQWLHGTVGNPLFDFCVEEGIFDSQEGRIELAMAKRAYAARDVQARRPDGTQVSRREFVRHSEAWSQAVLEAENLYAASLAAEAETAAEGGNAEDQXXXXRRNIEPKRLEAIAMTTVPNSPRQDPQVNGISHNVNNGGSTPNAAISADSRREDRVGAFLHRRVREILRAGGGSSDSCGIDEAILGYLVRKQHAVEGCDDLNVVSVAGYGMYEELKGGDVRVPGGFSRVVEALTAKISPERIRLQSPVTRVQWASQGQQERRDSPFAESHPCVVEYTTRRHSSGGIDVGGEQGHSDAVSTMRIRCKRVLVTVGLGVLKVRE 1137
L + AANRLGGRIFTHEESRSH SGGIPSRPLELGAQWLHGTVGNPLFDFCVEEGIFDSQEGRIELAMAKRAYAA DVQARRPDGTQVSRREFVRHSEAW+QAVLEAE LYAASLAAEAETAAEG NAE Q R+NI+PKRLE A T VPNSPRQDPQVNGIS NVNNGGSTPNAAIS+DSRREDRVGAFLHRRVREILRAGGGSS C IDE ILGYLVRKQ AVEGCDDL+VVSVAGYGMYEEL+GGDVRVPGGF RVVEAL AKISP RIRLQSPV+RVQWASQGQQERRDSPFAESHPCVVEYTTRRHSSGGIDVGGEQGHSD V TMRIRC+RVLVTVGLGVLK R+
Sbjct: 126 LVVLEAANRLGGRIFTHEESRSHHHPSPHSSCEEGVTTTT---SGGIPSRPLELGAQWLHGTVGNPLFDFCVEEGIFDSQEGRIELAMAKRAYAAGDVQARRPDGTQVSRREFVRHSEAWAQAVLEAETLYAASLAAEAETAAEGSNAEGQQQQQRQNIDPKRLEEAATTAVPNSPRQDPQVNGISQNVNNGGSTPNAAISSDSRREDRVGAFLHRRVREILRAGGGSSGGCVIDEDILGYLVRKQQAVEGCDDLDVVSVAGYGMYEELEGGDVRVPGGFFRVVEALAAKISPGRIRLQSPVSRVQWASQGQQERRDSPFAESHPCVVEYTTRRHSSGGIDVGGEQGHSDRVLTMRIRCRRVLVTVGLGVLKNRD 497
BLAST of mRNA_Ecto-sp13_S_contig6188.16891.1 vs. uniprot
Match: A0A443SJV5_9ACAR (Peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like protein 1 (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SJV5_9ACAR) HSP 1 Score: 67.0 bits (162), Expect = 1.980e-8 Identity = 48/176 (27.27%), Postives = 84/176 (47.73%), Query Frame = 1
Query: 631 EDRVGAFLHRRVREILRAGGGSSDSCGIDEAILGYLVRKQHAVEGCDDLNVVSVAGYGMYEELKGGDVRVPGGFSRVVEALTAKISPE----------RIRLQSPVTRVQWASQGQQERRDSPFAESHPCVVEYTTRRHSSGGIDVGGEQGHSDAVSTMRIRCKRVLVTVGLGVLK 1128
+D VG F+ + V L+ + S + AI L++++ + GC +N VS+ +G YEEL GG++ +PGG+S+++ L + + I L+ V +++W+ G++ AE +VE T S+G + +C V+VT+ LGVLK
Sbjct: 156 QDSVGCFIEKEVENYLKINCPNGSST--ERAIFDQLIKRETCIAGCHSMNEVSLKYFGAYEELPGGNLTIPGGYSQILLCLLNTVKNKLKEENREDHLNILLKHEVQKIKWSGVGKK------GAE----LVEITC---SNGAV----------------FKCNHVVVTIPLGVLK 300
BLAST of mRNA_Ecto-sp13_S_contig6188.16891.1 vs. uniprot
Match: A0A026WZG3_OOCBI (Peroxisomal N(1)-acetyl-spermine/spermidine oxidase n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026WZG3_OOCBI) HSP 1 Score: 64.7 bits (156), Expect = 1.120e-7 Identity = 72/326 (22.09%), Postives = 129/326 (39.57%), Query Frame = 1
Query: 151 IPSRPLELGAQWLHGTVGNPLFDFCVEEGIFDSQEGRIELAMAKRAYAARDVQARRPDGTQVSRREFVRHSEAWSQAVLEAENLYAASLAAEAETAAEGGNAEDQXXXXRRNIEPKRLEAIAMTTVPNSPRQDPQVNGISHNVNNGGSTPNAAISADSRREDRVGAFLHRRVREILRAGGGSSDSCGIDEAILGYLVRKQHAVEGCDDLNVVSVAGYGMYEELKGGDVRVPGGFSRVVEALTAKISPERIRLQSPVTRVQWASQGQQERRDSPFAESHPCVVEYTTRRHSSGGIDVGGEQGHSDAVSTMRIRCKRVLVTVGLGVLK 1128
I + +ELGA W+HG +GNP+F+ + G+ D + + + AA + DG Q+S + E Y L +R E ++T +P D + + ++ A I S + HRR+R++ I L++++ V GCD+++ V + G Y+EL+GG++ +P G+S ++E ++ I +RI + VT+++W Q HP E + + + V + G + I + V+ T+ LGVLK
Sbjct: 59 IGDQKVELGANWIHGVLGNPMFELAMANGLIDI----VHVPKPHKVVAATE------DGKQLS-----------FPILREIYEAYMCFL--------------------------RRCEEYFLSTY--TPPDD--ITSVGAHI-----ALEAEIYLSSLAPE------HRRIRQL----------------IFDCLLKRETCVTGCDNMDEVDLLEMGSYDELQGGNISLPNGYSAILEPVSKHIPKDRILTKHVVTKIRWQEQ------------KHPHNPEAESDSTLNSLLQVQCDNGKT-------ITAEHVICTLPLGVLK 287
BLAST of mRNA_Ecto-sp13_S_contig6188.16891.1 vs. uniprot
Match: A0A0L7L6U0_9NEOP (Peroxisomal n1-acetyl-spermine/spermidine oxidase (Fragment) n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7L6U0_9NEOP) HSP 1 Score: 64.3 bits (155), Expect = 1.530e-7 Identity = 40/160 (25.00%), Postives = 76/160 (47.50%), Query Frame = 1
Query: 694 SSDSCGIDEAILGYLVRKQHAVEGCDDLNVVSVAGYGMYEELKGGDVRVPGGFSRVVEALTAKISPERIRLQSPVTRVQWASQGQQERRD--SPFAESHPCVVEYTTRRHSSGGIDVGG---EQGHSDAVST----------MRIRCKRVLVTVGLGVLK 1128
+S+ + I L++++ + GC+ ++ + + G Y EL+GG++ +P G+S ++E LT I+P++I PV+++ W S+G D +S V+E ++ + G + H T +I V+ T+ LGVLK
Sbjct: 165 TSEEKRLRRLIFDCLLKRETCISGCNSMDEIDLLELGSYNELQGGNIIIPSGYSSILEPLTKNIAPDKILSNHPVSKIVWDSEGHTGLEDLGEESEDSDQTVIEDISKTSTLENPGEGTSLTDASHKPKKKTNYVTVLCDNGKKINANHVICTIPLGVLK 324
BLAST of mRNA_Ecto-sp13_S_contig6188.16891.1 vs. uniprot
Match: A0A6P3WZE2_DINQU (spermine oxidase isoform X2 n=3 Tax=Ponerini TaxID=141711 RepID=A0A6P3WZE2_DINQU) HSP 1 Score: 61.2 bits (147), Expect = 1.480e-6 Identity = 39/139 (28.06%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 712 IDEAILGYLVRKQHAVEGCDDLNVVSVAGYGMYEELKGGDVRVPGGFSRVVEALTAKISPERIRLQSPVTRVQWASQGQQERRDSPFAESHPCVVEYTTRRHSSGGIDVGGEQGHSDAVSTMRIRCKRVLVTVGLGVLK 1128
+ + I L++++ V GCD ++ V + G Y+EL+GG++ +P G+S ++E + + RI + VT+++W Q+++R S A S + + G ++V E G + I + V+ T+ LGVLK
Sbjct: 168 VRQLIFDCLLKRETCVTGCDTMDEVDLLEMGSYDELQGGNISLPDGYSAILEPVAKHVPKNRILTKHAVTKIRW----QKQKRSSVSAGSTEEL-----ESNVDGLVEVQCENGRT-------ISAQHVVCTLPLGVLK 290
BLAST of mRNA_Ecto-sp13_S_contig6188.16891.1 vs. uniprot
Match: UPI001D07B033 (spermine oxidase n=2 Tax=Coccinellini TaxID=263631 RepID=UPI001D07B033) HSP 1 Score: 61.2 bits (147), Expect = 1.490e-6 Identity = 39/143 (27.27%), Postives = 68/143 (47.55%), Query Frame = 1
Query: 700 DSCGIDEAILGYLVRKQHAVEGCDDLNVVSVAGYGMYEELKGGDVRVPGGFSRVVEALTAKISPERIRLQSPVTRVQWASQGQQERRDSPFAESHPCVVEYTTRRHSSGGIDVGGEQGHSDAVSTMRIRCKRVLVTVGLGVLK 1128
D + E I L++++ + GCDD+N + + G YEEL+GG++ +P G+S +++ + I E I L PV ++W S D +S VV+ + + +S + + V+ T+ LGVLK
Sbjct: 167 DERHLRELIFECLLKRETCISGCDDMNEIDLLELGTYEELQGGNIVLPEGYSSILKPFSDDIPSENILLNHPVNSIKWNSSSNGNESD----DSDKTVVDDSEKLDNSEKNLEFMTNVEVTTSNNKKFYGDHVICTIPLGVLK 305
BLAST of mRNA_Ecto-sp13_S_contig6188.16891.1 vs. uniprot
Match: A0A6P3WYW3_DINQU (peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1 n=1 Tax=Dinoponera quadriceps TaxID=609295 RepID=A0A6P3WYW3_DINQU) HSP 1 Score: 61.2 bits (147), Expect = 1.510e-6 Identity = 39/139 (28.06%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 712 IDEAILGYLVRKQHAVEGCDDLNVVSVAGYGMYEELKGGDVRVPGGFSRVVEALTAKISPERIRLQSPVTRVQWASQGQQERRDSPFAESHPCVVEYTTRRHSSGGIDVGGEQGHSDAVSTMRIRCKRVLVTVGLGVLK 1128
+ + I L++++ V GCD ++ V + G Y+EL+GG++ +P G+S ++E + + RI + VT+++W Q+++R S A S + + G ++V E G + I + V+ T+ LGVLK
Sbjct: 188 VRQLIFDCLLKRETCVTGCDTMDEVDLLEMGSYDELQGGNISLPDGYSAILEPVAKHVPKNRILTKHAVTKIRW----QKQKRSSVSAGSTEEL-----ESNVDGLVEVQCENGRT-------ISAQHVVCTLPLGVLK 310
BLAST of mRNA_Ecto-sp13_S_contig6188.16891.1 vs. uniprot
Match: A0A6I9WHL9_9HYME (spermine oxidase n=9 Tax=Formicidae TaxID=36668 RepID=A0A6I9WHL9_9HYME) HSP 1 Score: 60.1 bits (144), Expect = 3.460e-6 Identity = 41/139 (29.50%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 712 IDEAILGYLVRKQHAVEGCDDLNVVSVAGYGMYEELKGGDVRVPGGFSRVVEALTAKISPERIRLQSPVTRVQWASQGQQERRDSPFAESHPCVVEYTTRRHSSGGIDVGGEQGHSDAVSTMRIRCKRVLVTVGLGVLK 1128
+ + I L++++ V GCD ++ V + G Y+EL+GG++ +P G+S ++E ++ I ERI + VT+++W Q Q+ RD V +S+ I+V E G + I + ++ T+ LGVLK
Sbjct: 168 VRQLIFDCLLKRETCVTGCDSMDDVDLLEMGSYDELQGGNISLPNGYSAILEPVSKHIPEERILTKHTVTKIRW--QKQKCSRDDND-------VTGKLDSNSNSLIEVQCENGKT-------ITAEHIICTLPLGVLK 290
BLAST of mRNA_Ecto-sp13_S_contig6188.16891.1 vs. uniprot
Match: A0A6P7F959_DIAVI (peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X2 n=3 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7F959_DIAVI) HSP 1 Score: 59.7 bits (143), Expect = 4.680e-6 Identity = 25/72 (34.72%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 718 EAILGYLVRKQHAVEGCDDLNVVSVAGYGMYEELKGGDVRVPGGFSRVVEALTAKISPERIRLQSPVTRVQW 933
E I L++++ + GCDD+N V + G YEEL+GG++ +P G+S ++E L I + + ++ PV ++W
Sbjct: 172 ELIFECLLKRETCISGCDDMNEVDLLELGSYEELQGGNIVLPNGYSSILEPLKNAIPEDNLLVRHPVKTIKW 243 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6188.16891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6188.16891.1 >prot_Ecto-sp13_S_contig6188.16891.1 ID=prot_Ecto-sp13_S_contig6188.16891.1|Name=mRNA_Ecto-sp13_S_contig6188.16891.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp MSKYLYAIFAANRLGGRIFTHEESRSHHHSSPHSSCEEGVTTTTTTASGGback to top mRNA from alignment at Ecto-sp13_S_contig6188:436..4284- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6188.16891.1 ID=mRNA_Ecto-sp13_S_contig6188.16891.1|Name=mRNA_Ecto-sp13_S_contig6188.16891.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6188:436..4284- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6188:436..4284- >mRNA_Ecto-sp13_S_contig6188.16891.1 ID=mRNA_Ecto-sp13_S_contig6188.16891.1|Name=mRNA_Ecto-sp13_S_contig6188.16891.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1146bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6188:436..4284- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |