mRNA_Ecto-sp13_S_contig6184.16886.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6184.16886.1
Unique NamemRNA_Ecto-sp13_S_contig6184.16886.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6184.16886.1 vs. uniprot
Match: D8LC79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC79_ECTSI)

HSP 1 Score: 1608 bits (4164), Expect = 0.000e+0
Identity = 813/867 (93.77%), Postives = 837/867 (96.54%), Query Frame = 1
Query:    1 MHLEVVEVLALAGEGAAGSHWSRNTARPRYSLDTDEAKQASFHHSFTCFDVAERVEADHDIVFAGRSNGAVVLWRMVARNMFGGANKNDRVEEPLVTASPHRGAVTCLTHTRHGTYGSLIGPLMFSGSTDHTIKVWDAWAGPPFKEACLQTMAEHRGGVTALAFAGDTTLISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLFVYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLANARKTSDSLTMNQLADDEVTLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHNLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMGFHSSKADGMIYGMSPSEGCFFRWKLVKADSSVLIGRHDESILGLGFQGAPAYPIRRNPPSNDGGIDIAGRAGNMQKRTDRSEKNHVDESKGSCTGVVRTTCNELEGTGLECDGDKRPTDQRGSHGNVGRVVEIHNSDTEASEEXXXXXXXXXXXXXXXXXXEASFGLVILSASLNGVIRAWETLGKSEKYCMRHSGGAEVTSMLVLPGGSILVTGTDDGSVRFWQLDTGAGESYKAHNNSVSALAAYSDQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVDYCVRDAHRALDGMDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLEGHEDSIEALVSDGLFLFSGSCDGAVRVWNVSNLEHEDDNVSLGDNSRHRGEMGRTEAMMVGAFKAHPNGVSGIAVMTGERNRRADVVYAGRESHEAGGLIATCGKAEGIVKIWDYTHVEDDGTCGR 2601
            MHLEVVEVLALAGEGAAGSHWSRNTARPRYSL TDEAKQASFHHSFTCFDVAERVEADHDIVFAGRSNGAVVLWRMVARNMFGGANKNDRV+EPL+TASPHRGAVTCLTHTR GTYGSLIGPLMFSGS DHT+KVW+AWAGPPFKEACLQTMAEHRGGVTALAFAGDTTLISTARDGSVRLWRPQRGRKLLRFPFFCCVKCL VYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLANARKTSD LTMNQLADDEVTLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGH+LFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMGFHSSKADGM+YGMSPSEGCFFRWKLVKA+SSVLIGRHD+SILGLGFQGA A+P RRN PSNDGGID+AGRAGN+QK  DRSEK +V ES GSCT VV TTC ELEGTGLE DGDKRPTDQRGSHG++G V EIHNSDTEASEEXXXXXXXXXXXXXXXXXXEA FGLV+LSAS+NGVIRAWETLGKSEKYCMRHSGG EVTSMLVLPGGS+LVTGTDDGSVRFWQLDTGAGES++AH+N+VSALAAY DQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVDYCVRDAH ALDG+DGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLEGHEDSIEALVSDGLFLFSGSCDGAVR+WNVSNL HED NVSLGDNSRHRGEMGRTE MMVGAFKAHPNGVSG+AVMT ERN R DVVYAGRES EAGGLIATCGKAEGIVKIWDYTHVEDDGTCGR
Sbjct:    1 MHLEVVEVLALAGEGAAGSHWSRNTARPRYSLGTDEAKQASFHHSFTCFDVAERVEADHDIVFAGRSNGAVVLWRMVARNMFGGANKNDRVQEPLITASPHRGAVTCLTHTRQGTYGSLIGPLMFSGSADHTVKVWNAWAGPPFKEACLQTMAEHRGGVTALAFAGDTTLISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLSVYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLANARKTSDILTMNQLADDEVTLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHSLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMGFHSSKADGMMYGMSPSEGCFFRWKLVKAESSVLIGRHDDSILGLGFQGASAFPSRRNAPSNDGGIDVAGRAGNVQKLEDRSEKKNVYESDGSCTAVVGTTCKELEGTGLESDGDKRPTDQRGSHGSMGGVAEIHNSDTEASEEXXXXXXXXXXXXXXXXXXEAGFGLVVLSASMNGVIRAWETLGKSEKYCMRHSGGVEVTSMLVLPGGSVLVTGTDDGSVRFWQLDTGAGESFQAHDNTVSALAAYRDQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVDYCVRDAHGALDGLDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLEGHEDSIEALVSDGLFLFSGSCDGAVRIWNVSNLGHED-NVSLGDNSRHRGEMGRTETMMVGAFKAHPNGVSGMAVMTSERNSRVDVVYAGRESQEAGGLIATCGKAEGIVKIWDYTHVEDDGTCGR 866          
BLAST of mRNA_Ecto-sp13_S_contig6184.16886.1 vs. uniprot
Match: A0A6H5JSR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR9_9PHAE)

HSP 1 Score: 498 bits (1283), Expect = 8.580e-167
Identity = 297/445 (66.74%), Postives = 309/445 (69.44%), Query Frame = 1
Query: 1420 MQKRTDRSEKNHVDESKGSCTGVVRTTCNELEGTGLECDGD-KRPTDQRGSHGNVGRVVEIHNSDTEASEEXXXXXXXXXXXXXXXXXXEASFGLVILSASLNGVIRAWETLGKSEKYCMRHSGGAEVTSMLVLPGGSILVTGTDDGSVRFWQLDTGAGESYKAHNNSVSALAAYSDQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVDYCVRDAHRALDGMDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLEGHEDSIEALVSDGLFLFSGSCDGAVRVWNVSNLEHEDDNVSLGDNSRHRGEMGRTEAMMVGAFKAHPNGVSGIAVMTGERNRRADVVYAGRESHEAGGLIATCGKAEGIVKIWDYTHVEDDGTCGRLITEFRSQDESLFNCVACTQDILGKPLLFAGTNEGSILQLAYSGIDEGNI 2751
            MQ   DRSEKNHVDESKGSC GVVRTTCNELEGTGLECDGD KRPTDQRGSHG+VG V EIHNSD EASEEXXXXXXXXXXXXXXXXX EA FGLV+LSASLNGVIRAWETLGKSEKYCMRHSGGAEVTSMLVLPGGS+LVTGTDDGSVRFWQLDTGAGES+KAH+N+VSALAAY DQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTV+YCVRDAH  LDG+DGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLE                                       VSL                                                                                   RLI+EFRSQDESLFNCVACTQD LGKPLLFAGTNEGSI+QLA+SGIDEG+I
Sbjct:    1 MQTLEDRSEKNHVDESKGSCIGVVRTTCNELEGTGLECDGDDKRPTDQRGSHGSVGGVAEIHNSDREASEEXXXXXXXXXXXXXXXXXGEAGFGLVVLSASLNGVIRAWETLGKSEKYCMRHSGGAEVTSMLVLPGGSVLVTGTDDGSVRFWQLDTGAGESFKAHDNTVSALAAYRDQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVEYCVRDAHGVLDGLDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLE---------------------------------------VSL----------------------------------------------------------------------------------ARLISEFRSQDESLFNCVACTQDTLGKPLLFAGTNEGSIIQLAFSGIDEGHI 324          
BLAST of mRNA_Ecto-sp13_S_contig6184.16886.1 vs. uniprot
Match: A0A835ZBD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD8_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.050e-52
Identity = 240/952 (25.21%), Postives = 339/952 (35.61%), Query Frame = 1
Query:  277 EPLVTASPHRGAVTCLTHTRHGTYGSLIGP------------------------LMFSGSTDHTIKVWDAWAGPPFKEACLQTMAEHRGGVTALAFA----------------GDTTLIST-------------------------ARDGSVRLWRPQRGRKLLRFPFFCCVKCLFVY-------PTAVGRGMSRSIGAGQPGAFVHVW-------PTAACVAGGETWT-----------------------FYCGDSNGTVSVFQRAPTSAAKRLANARKTSDSLTMNQLADDEVTLHRRWTHLHSLAI--------------TGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHN------------------------LFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMGFHSSKA--------DGMIYGMSPSEGCFFRWKLVKADSSVLIGRHDESILGLGFQGAPAYPIRRNPPSNDGGIDIAGRAGNMQKRTDRSEKNHVDESKGSCTGVVRTTCNELEGTGLECDGDKRPTDQRGSHGNVGRVVEIHNSDTEASEEXXXXXXXXXXXXXXXXXXE-------ASFGLVILSASLNGVIRAWETLGKSEKY-------------------------------------------CMRHSGGAEVTSMLVLPGGSILVTGTDDGSVRFWQLDTGAGESYKAHNNSVSALAAYSD-QLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVDYCVRDAHRALDG-----------------MDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLV-----------------------------LE-GHEDSIEALVSDGLFLFSGSCDGAVRVWNVSNLEHEDDNVSLGDNSRHRGEMGRTEA 2394
            E L TA PH GAV C+ HT  G    L                           L+ SG  DH +K+WD W G   +E CLQT  +HRG VTALAF                 GD +L+S                          +RDG++R+WR Q GRKLL  PFFCC + +          P A+    +R + A  P  ++          PT   V G E WT                                         S   RL +A   +       +   +V   +RW  LH+L                T L +VAEH FL S G DG  RVLD  +G +FM +                              ++T +AWDL HEQL+L D  G V+VWN Y E+LLL+K+VA+ +   G R G ++  L G   S A        D ++Y +SP+                                A                    RA + ++ T RS +                 C   E  G           + G+HG+    +      T     XXXXXXXXX         +       A+    +++ SL+  +RAW+  G +  +                                             R +  AE+    +LP G +L  GT+ G V+FW L T     + AH N+VSA+AA  D   G ++LA+  ++G + +W  HAKDG   +R+P ++  V  AH   D                  +D E+L LAFV     +LAS GND  VRCW  R R  +  LV                             LE G  +++  + S    L+ G   G VR+W+  ++      V LG  + H    G + +
Sbjct:  124 EGLSTARPHSGAVRCIAHTPAGGCAMLXXXXXXXXXXXXXXXXXXXXXXXXXRALVASGGADHAVKIWDPWEGLG-RETCLQTFTKHRGAVTALAFLLXXXXXXXXXXXXXXMGDGSLLSCFAXXXXXXXXXXXXXXXXXXXXXXXSRDGTLRVWRLQDGRKLLLNPFFCCARVIGAAALNAHPAPGAIAPWRARGLSAASPLLWIVELQRSAANAPTVLAVWGSEGWTAXXXXXXXXXXXXXAYVVXXXXXXXXXXXXXXXXXXXXTHVSPGDRLESAGAGALGAKGEHMPSYQVHATKRWERLHALGXXXXXXXXXXXXXXXTALAVVAEHGFLCSAGADGRARVLDLARGTSFMDLHHPVRGRGXXXXXXXXXXXXXXXXXGARAGVYTGLAWDLRHEQLILCDGFGNVEVWNAYAETLLLRKRVARPLAPRGARAGDAVPGLSGVRVSAAGVRVSTAEDTVVYALSPA--------------------------------AXXXXXXXXXXXXXXXXXXXXRALHWRRSTTRS-RXXXXXXXXXXXXXXXXXCRLTERRGCR---------RLGAHGDAVTAILTQQPRTXXXXXXXXXXXXXXATAADADGSDGAARGASAAQHCSVMTVSLDSTVRAWDADGDARGWRSSASXXXXXXXXXXXXXXXXXXXWQRVQKRKSAXXXXXXXXXXXRAAADAELACACLLPVGRVLAAGTEAGDVQFWMLGTSTCTVHAAHANTVSAIAAGEDASCGDILLATGSYDGDLALWGLHAKDGPVANRLPKLEQRVAGAHGRRDASLSAAAAATPLSDAAALVDTEVLALAFVGR-AGLLASGGNDGAVRCWCARSRRRLAELVPLXXXXXXXXXXXXXXXXXXXXXXXXXXXLEAGDAEAVTCMASARDHLYVGHHGGFVRLWSTEHVLRGGKGVLLGIVAAHEAADGSSSS 1031          
BLAST of mRNA_Ecto-sp13_S_contig6184.16886.1 vs. uniprot
Match: A0A662WIJ9_9STRA (TrmE-type G domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIJ9_9STRA)

HSP 1 Score: 170 bits (430), Expect = 8.520e-40
Identity = 180/680 (26.47%), Postives = 269/680 (39.56%), Query Frame = 1
Query:  367 LMFSGSTDHTIKVWDAWAGP----PFKEA--CLQTMAEHRGGVTALAFAGDTT--LISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLFVYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLANARKTSDSLTMNQLADDE-----------VTLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHNLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMGFHSSKADGMIYGMSPSEGCFFRWKLVKADSSVLIGRHDESILGLGF-QGAPAYPIRRNPPSNDGGIDIAGRAGNMQKRTDRSEKNHVDESKGSCTGVVRTTCNELEGTGLECDGDKRPTDQRGSHGNVGRVVEIHNSDTEASEEXXXXXXXXXXXXXXXXXXEASFGLVILSASLNGVIRAWETLGKSEKYCMRHSGGAEVTSMLVLPGGSILVTGTDDGSVRFWQLDTGAGESYKAHNNSVSALAAYSDQLGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVDYCVRDAHRALDGMDGEILCLAFVASDVPVLASAGNDRVVR--------CWRLRERTCILLLVLEGHEDSIEALVSDGLFLFSGSCDGAVRVWNVSNL 2322
            L+F+GS D +IKVWD W G     P + +  C+QT+ EH G V  +         L+S + D +V+ W P  GR LL +P+F   + +                  QPG     WP+  CV  G + T + GDS G +SV+  + TS            DS TM  L  DE             L R+++H HSL I+ L LVA++ F++S+G D   +V+D + G   +TI +     FTS +WD   + L+L D++G VQVW+ + + L+ KKK+                                +SP         L  A   VLIG      L  G   G   + I R         D+  R                    G    +V       + TG  C+    P +Q+   G +   V +  +                                  SASL+G IR W++      +       +E+T M+V      L TG D G V+ W + T  GE  +A +N  S++   + Q    +L +    G + +W  +  +GL +   P     V D          E+ CLAF   D   LA  G +  V          W   +R  +   V + H D++ +L   G FLFSGS D  +R+WNV +L
Sbjct:  245 LLFTGSADRSIKVWDPWGGAETPLPTRSSYSCVQTLIEHSGSVVCVQVMTQQKHGLVSCSLDHTVKTWYPAEGRALLLYPWFLPAQSI-----------------AQPGTN---WPSTLCVRSGASDTLFVGDSGGCISVYTSSATSM-----------DSDTMLDLQHDEPLGGQSDSRFQFRLKRKYSHFHSLGISSLQLVADNCFVVSLGFDEKAQVIDAISGVLSLTISNASGARFTSCSWDSPSQLLLLGDSTGFVQVWDIFEDKLVGKKKMV-------------------------------VSPP--------LAIAGIYVLIGAAAGDFLLTGLANGMKQWLINR---------DVGYR-----------------NCSGHSDAIVAVAVINGDSTG-SCNDADDPCEQKEGDGRLMEAVGLAKT------------------------------CQFFSASLDGSIRCWDSFDMKVSFSYEER-QSEITCMIVSKKFRKLFTGHDGGFVKVWGIHT--GEFVEAPSNQKSSVTCLAWQE---ILLAGNANGCVSMWEVNY-EGLCRS-TPFQLTLVNDK-------SDEVTCLAFSEGDF--LAPDGQEFFVAGYFTGQIAIWSFAKRAVVR--VFKAHGDAVCSLALHGCFLFSGSDDTLLRMWNVFHL 778          
BLAST of mRNA_Ecto-sp13_S_contig6184.16886.1 vs. uniprot
Match: A0A833WXG3_PHYIN (WD domain G-beta repeat n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WXG3_PHYIN)

HSP 1 Score: 155 bits (392), Expect = 1.270e-35
Identity = 201/838 (23.99%), Postives = 328/838 (39.14%), Query Frame = 1
Query:  301 HRGAVTCLTHTRHGTYGSLIGP--LMFSGSTDHTIKVWDAWAGP----PFKEA--CLQTMAEHRGGVTALAFAGDTT--LISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLFVYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLANARKTSDSLTMNQLADDEVT------LHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHNLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMGFHSSKADGMIYGMSPSEGCFFRWKLVKADSSVLIGRHDESILGLGFQGAPAYPIRRNPPSNDGGIDIAGRAGNMQKRTDRSEKNHVDESKGSCTGVVRTTCNELEGTGLECDGDKRPTDQRGSHGNVGRVVEIHNSDTEASEEXXXXXXXXXXXXXXXXXXEASFGLVILSASLNGVIRAWETLGKSEKYCMRHSGGAEVTSMLVLPGGSILVTGTDDGSVRFWQLDTGAGESYKAH-NNSVSALAAYSDQLGSLVLASAGFEGAIIIWRAHAKDGL-------------KKDRVPTVDYCVRDAHRALDGMDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLEGHEDSIEALVSDGLFLFSGSCDGAVRVWNVSNLEHEDDNVSLGDNSRHRGEMGRTEAMMVGAFKAHPNGVSGIAVMTGERNRRADVVYAGRESHEAGGLIATCGKAEGIVKIWDYTHVEDDGTC---GRLITEFRSQDESLFNCVACTQDILGKPLLFAGTNEGSIL 2715
            H GAV  L       + S +GP  L+FSGS D +IK+WD W+G     P K +  C+QT+ EH G V  +         L+S + D +V+ W P  GR LL +P+F   + +                  QPG+    WP+A C+  G   T + GDS G +SV+     S++   A   +T   L  ++   D+        L R+++H HSL I+ L LVA++ F++S+G D   +V+D + G    TI S     F S +WD   + L+L D +G V +W  + + L+ K+++                A++G +S                          S  L G   E +L                                                G   GV +  CN   G  + C G         S   VG VV  ++ ++  S E                  E+       SASL+G IR W++    E +       +E+T M+       + TG + G V+ W +  G   +     N+SV+ LAA   +   ++LA +   G + +W  +  DG              K+  V ++ +C + +  A +G   E + + ++   + V+ S     VV  +R              H D++ +L   G FLFSGS D  +R+WN  NL                      E   +G  +  P+  S     +G      DV+          GL+ +   A+G + +WDYT  ED+      G+++  F ++ +    C+ C  D   +  +  GT+EG ++
Sbjct:    4 HTGAVLTLD------FASDLGPGGLLFSGSADRSIKIWDPWSGNGTPLPTKSSHTCVQTLTEHCGSVVCVQILAQQNHGLVSCSLDRTVKTWYPAEGRALLLYPWFLPAQSI-----------------SQPGSS---WPSALCIRSG---TLFVGDSAGGISVYSH---SSSNNHAIVSETILDLVDDKYQSDQTDTRFQFGLKRKFSHFHSLGISRLELVADNCFVVSLGYDEKAQVIDAISGALSATIRSASGARFLSCSWDEQDQVLLLGDVAGCVHLWTIFEDKLIGKRQIVSMTPL----------AIVGMYSL-------------------------SGTLAG---EFLLT-----------------------------------------------GLANGVKQWLCNRNVGY-VNCSGH--------SDAIVGIVVVENDVESFVSNEDDPATQCDKIAAV-----ESGKTCQFFSASLDGSIRCWDSYEMKETFKFEER-DSEITCMIASKQFHKIFTGHEGGFVKVWSIYAGEMSTLALEENSSVTCLAAGIVRDQEVLLAGSA-AGCVSMWEVN-HDGFARAVPFQPILWSEKQGEVTSILFC-KGSFLAQEGQ--EFVVVGYLTGQI-VIWSFAKKAVVCSFR-------------AHSDAVCSLTLHGCFLFSGSDDTLLRMWNTFNLP---------------------ETYELGVLRP-PSSSSSSG--SGSPIVCLDVM-------PFLGLVLSAA-ADGTLLVWDYTAFEDENAFDAYGKIV--FWAKVDGCVKCLQCWPD---RRAMICGTSEGKLI 653          
BLAST of mRNA_Ecto-sp13_S_contig6184.16886.1 vs. uniprot
Match: A0A5D6Y3G7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3G7_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.590e-33
Identity = 206/880 (23.41%), Postives = 321/880 (36.48%), Query Frame = 1
Query:  184 VFAGRSNGAVVLWRMVARNMFGGANKNDRVEEPLVTASPHRGAVTCLTHTRH-GTYGSLIGPLMFSGSTDHTIKVWDAWAGPPFK------EACLQTMAEHRGGVTALAFAGDTT--LISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLFVYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLAN-------------ARKTSDSLTMNQLADDEVTLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHNLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMGFHSSKADGMIYGMSPSEGCFFRWKLVKADSSVLIGRHDESILGLGFQGAPAYPIRRNPPSNDGGIDIAGRAGNMQKRTDRSEKNHVDESKGSCTGVVRTTCNELEGTGLECDGDKRPTDQRGSHGNVGRVVEIHNSDTEASEEXXXXXXXXXXXXXXXXXXEASFGLVILSASLNGVIRAWETLGKSEKYCMRHSGGAEVTSMLVLPGGSILVTGTDDGSVRFWQLDTGAGESYKAHNNSVSALAAYSDQLGSLVLASAGFEGAIIIWR---------AHAKDGLKKDRVPTVDYCV--RDAHRALDGMDGEILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLEGHEDSIEALVSDGLFLFSGSCDGAVRVWNVSNLEHEDDNVSLGDNSRHRGEMGRTEAMMVGAFKAHPNGVSGIAVMTGERNRRADVVYAGRESHEAGGLIATCGKAEGIVKIWDYTHVE---DDGTCGRLITEFRSQDESLFNCVACTQDILGKPLLFAGTNEGSIL 2715
            VF GR +GAVV W+      F        V         H G V  +      G  G     L+FSGS D T+K+WD W G   +        C+QT+  H G VT+L         L+S + D +++ W P  GR LL +P++   + +         GM               WPT+  V  G     + GDS+G +S++    +S+A    N             A +   S  +   A  + TL R+ +H HSL +  L LVA+++ ++S+G D    VLD + G    TI +     FT  +WD     LVLADA G V +W+ + + L+   +V    T +      ++  L G ++S  D +  G++    C  +W++ +         H E++  L                 D  + +            RSE +  D  +                  +E      PT                                            + F     SASL+  +R W++      +       +EVT+M        + TG + G V+ W + TG   S + H  S               L +   +G + IW          A     L KDR   V   +  R  + A  G +       FV        S+G+   +  W L +R  +LL   + H DS+ +L   G FLFSGS D  VR+WN+  L                       A   G     P   S  +  TG      DVV       E G +++    A+G V +WDY   E   D    G+++  +R++ ES   C+        +  +  G++EG I+
Sbjct:  499 VFGGRHDGAVVHWQTQQSCSF--------VPPIANLLRKHGGPVLTMVFAPELGKEG-----LLFSGSVDRTVKIWDPWGGSEAQVHSRSDHYCVQTIPAHSGSVTSLKIMPQQHHGLVSCSLDHTIKTWYPADGRGLLLYPWYVPAQTI-----TYASGM---------------WPTSLVVREGSHAALFVGDSSGCISLYTAGSSSSATDAPNDLDDGLGRADSAGASRCVVSPEIAFAAKFQFTLRRKLSHFHSLGVLHLQLVADNSLVVSLGFDQKASVLDAISGALSSTIPNPRQTRFTCCSWDQRGHALVLADALGHVMIWDVFQDRLVRSLRVFPTGTAL-----ITVSVLSGSYAS-GDFLFAGVA---SCMKQWRIDRDVGYAECTGHSEAVTALVVXXXXXXXXXXXXXXXDDELVLG-----------RSEDSDGDSDE------------------VEPGAPPVPT-----------------------------------------LSSSRF----FSASLDNTVRCWDSYDMKATFGFEER-DSEVTAMAPSRLFRRIFTGHESGLVKAWGIHTGRSVSSRVHTKSTVTCVTSGVMRDQEFLLAGDMDGMVTIWEVTYEGLTHVATLSASLSKDRREEVSSILFNRGLYLAPHGQE------FFVVGH-----SSGH---ISIWSLGKR--LLLQSFKAHSDSVSSLAMHGWFLFSGSDDTLVRMWNLVGL-----------------------ATTYGIGTLRPRFGSSTSG-TGSPIVGVDVVP------EVGLVVSAA--ADGSVVVWDYGGFEGNEDFDAYGKIV--YRNRHESHVQCMRYWPR---RRSVICGSSEGKIV 1208          
BLAST of mRNA_Ecto-sp13_S_contig6184.16886.1 vs. uniprot
Match: G4YZT3_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZT3_PHYSP)

HSP 1 Score: 148 bits (374), Expect = 2.430e-33
Identity = 120/400 (30.00%), Postives = 181/400 (45.25%), Query Frame = 1
Query:  184 VFAGRSNGAVVLWRMVARNMFGGANKNDRVEEPLV-TASPHRGAVTCLTHTRHGTYGSLIGP--LMFSGSTDHTIKVWDAWAGP----PFKE--ACLQTMAEHRGGVTAL-AFAGDTTLISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLFVYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLANARKTSDSLTMNQLADDEVTLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHNLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMGFHS----SKADGMIYGMSPSEGCFFRWKLVKADSSVLIGRHDESILGLGFQ 1341
            +F GR +GA++ W +         ++   V  P   T   H GAV  L       +   +GP  L+FSGS D +IK+WD W G     P K   AC+QT+ EH G V  L        +IS + D +V+ W P  GR LL +P++   + +                  QPG+    WP+A CV  G   T + GDS G +S                 +  D + M      + +L R+++H HSL I+ L +VA+  F++S+G D   +++D + G    TI S     FTS AWD   + L+L DA+G V +WN + + LL KKK+  A+             ++G HS       D ++ G++       +W   +    V  G H +SIL   FQ
Sbjct:   50 IFGGRHDGAIMHWPI---------SQAPSVTIPSANTLRGHTGAVLTLD------FAPELGPEGLLFSGSADRSIKIWDPWGGADSSLPTKGGYACVQTLTEHCGSVVCLRVLTRSHGIISCSLDRTVKTWYPAEGRALLLYPWYLPAQSIL-----------------QPGS---CWPSAFCVRSGANGTLFIGDSGGGIS-----------------QLGDQVDMKF----QFSLKRKFSHFHSLGISKLEIVADSCFVVSLGFDEKAQIIDAISGALSSTICSASAARFTSCAWDDRGQILLLGDAAGYVHLWNIFEDKLLGKKKMVAAMPL----------GIVGMHSLTGIPAGDFLLTGLANGVK---QWICNRNVGYVSCGGHSDSILTKTFQ 380          
BLAST of mRNA_Ecto-sp13_S_contig6184.16886.1 vs. uniprot
Match: A0A2P4YF63_9STRA (WD40 repeat-like protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YF63_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.720e-33
Identity = 105/335 (31.34%), Postives = 164/335 (48.96%), Query Frame = 1
Query:  184 VFAGRSNGAVVLWRMVARNMFGGANKNDRVEEPLV-TASPHRGAVTCLTHTRHGTYGSLIGP--LMFSGSTDHTIKVWDAWAG--PPF----KEACLQTMAEHRGGVTALAFAGDTT--LISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLFVYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLANARKTSDSLTMNQLAD--DEV---TLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHNLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKV 1140
            +F GR +GA++ W +         +    V  P   T   H GAV  L       +   +GP  L+FSGS D +IK+WD W G   P     + AC+QT++EH G V  L      +  +IS + D +V+ W P  GR LL +P++   + +                  QPG+    WP+A CV  G   T + GDS G +SV+  +   A + + +     D +   QL D  DE     L R+++H HSL I+ L +VA++ F++S+G D   +++D + G    TI S G   F S  WD   + L+L D +G V +WN + + LL ++++
Sbjct:   19 IFGGRHDGAIMHWPI---------SPTPSVTTPCANTMRGHAGAVLTLD------FAPDLGPEGLLFSGSADRSIKIWDPWGGLDTPLPSRNRYACVQTLSEHCGSVVCLRVLTHQSHAIISCSLDRTVKTWYPTEGRGLLLYPWYLPAQSI-----------------SQPGSS---WPSAFCVRSGANGTLFIGDSAGGISVYANSSGKANEIVPD--NAIDIVDYKQLGDHFDEKFQWALRRKFSHFHSLGISKLQVVADNCFVVSLGFDEKAQIIDAISGALSATISSAGAARFISCTWDDQGQILLLGDVAGYVHLWNMFDDKLLARRQM 316          
BLAST of mRNA_Ecto-sp13_S_contig6184.16886.1 vs. uniprot
Match: A0A6G0RZU9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RZU9_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.990e-32
Identity = 105/333 (31.53%), Postives = 159/333 (47.75%), Query Frame = 1
Query:  184 VFAGRSNGAVVLWRMVARNMFGGANKNDRVEEPLV-TASPHRGAVTCLTHTRHGTYGSLIGP--LMFSGSTDHTIKVWDAWAGP----PFKE--ACLQTMAEHRGGVTALAFAGDTT--LISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLFVYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRA--------PTSAAKRLANARKTSDSLTMNQLADDEVTLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHNLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLL 1125
            +F GR +GA++ W +         ++   V  P V T   H GAV  L       +   +GP  L+FSGS D +IKVWD W G     P K   AC+QT+ EH G V  L         +IS + D +V+ W P  GR LL +P++   + +                  QPG+    WP+A CV  G   T + GDS G +SV+  +        P +A + + + R      T +Q +     L R+++H HSL I+ L +VA++ F++S+G D   +++D + G    TI S     F S  WD   + L+L DA+G V +WN + +  L
Sbjct:   80 IFGGRHDGAIMHWPI---------SQTPSVTSPCVNTLRGHTGAVLTLD------FAPDLGPEGLLFSGSADRSIKVWDPWGGTDSSLPTKGGYACVQTLTEHCGSVVCLRVLTHQNHGIISCSLDRTVKTWYPAEGRALLLYPWYLPAQSI-----------------SQPGSS---WPSAFCVRSGANGTLFVGDSGGGISVYTHSSPSDDTIVPDNALEVVEDKRLGDQVYTKSQFS-----LKRKFSHFHSLGISKLQVVADNCFVVSLGFDEKAQIIDAISGALSSTICSASAARFNSCTWDSRGQILLLGDAAGYVHLWNIFEDKFL 372          
BLAST of mRNA_Ecto-sp13_S_contig6184.16886.1 vs. uniprot
Match: A0A225VLV2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLV2_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.370e-32
Identity = 99/334 (29.64%), Postives = 159/334 (47.60%), Query Frame = 1
Query:  184 VFAGRSNGAVVLWRMVARNMFGGANKNDRVEEPLVTASPHRGAVTCLTHTRHGTYGSLIGP--LMFSGSTDHTIKVWDAWAGP----PFKEA--CLQTMAEHRGGVTALAFAGDTT--LISTARDGSVRLWRPQRGRKLLRFPFFCCVKCLFVYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNGTVSVFQRAPTSAAKRLANARKTSDSLTMNQLADD-----EVTLHRRWTHLHSLAITGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHNLFTSVAWDLAHEQLVLADASGVVQVWNTYTESLLLKKKV 1140
            +F GR +GA++ W + +       + N        T   H G V  L       +   +GP  L+FSGS D TIK+WD W  P    P + +  C+QT+ EH G V  +         ++S + D +V+ W P  GR L+ +P++   + +                  QPG+    WP+  CV  G   T + GDS G +SV+  +  +    ++N     DS+   QL D      +  L R+++H HSL ++ L +VA++ F++S+G D   +V+D + G    TI S     F S  WD   + L+L D +G V +WN + + LL KK++
Sbjct:   78 IFGGRHDGAIMHWSISSIPSVTIPSAN--------TMRGHTGVVLSLD------FAPDLGPQGLLFSGSADRTIKIWDPWGTPDTPLPTRSSYTCVQTLTEHCGSVVCVRILTHQNHGIVSCSLDHTVKTWYPTEGRALMLYPWYMPAQSIL-----------------QPGSS---WPSVFCVRSGANGTLFVGDSAGGISVYTHSSDNTHDMVSNT--PLDSVDAKQLGDQLSMKFQFGLRRKFSHFHSLGVSTLQMVADNCFVVSLGFDEKAQVVDAISGALSSTICSSSGTRFISCTWDDRGQLLLLGDIAGYVHLWNMFEDKLLAKKQL 375          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6184.16886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC79_ECTSI0.000e+093.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSR9_9PHAE8.580e-16766.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZBD8_9STRA1.050e-5225.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A662WIJ9_9STRA8.520e-4026.47TrmE-type G domain-containing protein n=2 Tax=Noth... [more]
A0A833WXG3_PHYIN1.270e-3523.99WD domain G-beta repeat n=1 Tax=Phytophthora infes... [more]
A0A5D6Y3G7_9STRA1.590e-3323.41Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
G4YZT3_PHYSP2.430e-3330.00Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A2P4YF63_9STRA3.720e-3331.34WD40 repeat-like protein (Fragment) n=1 Tax=Phytop... [more]
A0A6G0RZU9_9STRA1.990e-3231.53Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A225VLV2_9STRA2.370e-3229.64Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6184contigEcto-sp13_S_contig6184:1733..7626 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1622.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LC79
Model size2789
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0032182,GO:0043130,GO:0044424,GO:0044464
Exons13
EggNOG free text desc.regulation of protein monoubiquitination
EggNOG OGsKOG0308@1,KOG0308@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-20_004750.1
Cds size2757
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463861.247867-CDS-Ecto-sp13_S_contig6184:1732..19301681463861.247867-CDS-Ecto-sp13_S_contig6184:1732..1930Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 1733..1930 +
1681463861.2659767-CDS-Ecto-sp13_S_contig6184:2248..24521681463861.2659767-CDS-Ecto-sp13_S_contig6184:2248..2452Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 2249..2452 +
1681463861.2751975-CDS-Ecto-sp13_S_contig6184:2662..29121681463861.2751975-CDS-Ecto-sp13_S_contig6184:2662..2912Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 2663..2912 +
1681463861.2843335-CDS-Ecto-sp13_S_contig6184:3090..32771681463861.2843335-CDS-Ecto-sp13_S_contig6184:3090..3277Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 3091..3277 +
1681463861.2935328-CDS-Ecto-sp13_S_contig6184:3547..36921681463861.2935328-CDS-Ecto-sp13_S_contig6184:3547..3692Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 3548..3692 +
1681463861.3036344-CDS-Ecto-sp13_S_contig6184:3952..40871681463861.3036344-CDS-Ecto-sp13_S_contig6184:3952..4087Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 3953..4087 +
1681463861.3150299-CDS-Ecto-sp13_S_contig6184:4450..46061681463861.3150299-CDS-Ecto-sp13_S_contig6184:4450..4606Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 4451..4606 +
1681463861.3270252-CDS-Ecto-sp13_S_contig6184:4931..54991681463861.3270252-CDS-Ecto-sp13_S_contig6184:4931..5499Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 4932..5499 +
1681463861.3399525-CDS-Ecto-sp13_S_contig6184:5838..60351681463861.3399525-CDS-Ecto-sp13_S_contig6184:5838..6035Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 5839..6035 +
1681463861.3491504-CDS-Ecto-sp13_S_contig6184:6244..64271681463861.3491504-CDS-Ecto-sp13_S_contig6184:6244..6427Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 6245..6427 +
1681463861.3602402-CDS-Ecto-sp13_S_contig6184:6579..66881681463861.3602402-CDS-Ecto-sp13_S_contig6184:6579..6688Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 6580..6688 +
1681463861.3704162-CDS-Ecto-sp13_S_contig6184:6865..71331681463861.3704162-CDS-Ecto-sp13_S_contig6184:6865..7133Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 6866..7133 +
1681463861.3804445-CDS-Ecto-sp13_S_contig6184:7437..75941681463861.3804445-CDS-Ecto-sp13_S_contig6184:7437..7594Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6184 7438..7594 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463861.3931303-UTR-Ecto-sp13_S_contig6184:7594..76261681463861.3931303-UTR-Ecto-sp13_S_contig6184:7594..7626Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6184 7595..7626 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6184.16886.1prot_Ecto-sp13_S_contig6184.16886.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6184 1733..7594 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6184.16886.1

>prot_Ecto-sp13_S_contig6184.16886.1 ID=prot_Ecto-sp13_S_contig6184.16886.1|Name=mRNA_Ecto-sp13_S_contig6184.16886.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=919bp
MHLEVVEVLALAGEGAAGSHWSRNTARPRYSLDTDEAKQASFHHSFTCFD
VAERVEADHDIVFAGRSNGAVVLWRMVARNMFGGANKNDRVEEPLVTASP
HRGAVTCLTHTRHGTYGSLIGPLMFSGSTDHTIKVWDAWAGPPFKEACLQ
TMAEHRGGVTALAFAGDTTLISTARDGSVRLWRPQRGRKLLRFPFFCCVK
CLFVYPTAVGRGMSRSIGAGQPGAFVHVWPTAACVAGGETWTFYCGDSNG
TVSVFQRAPTSAAKRLANARKTSDSLTMNQLADDEVTLHRRWTHLHSLAI
TGLVLVAEHNFLLSVGNDGACRVLDYLQGNTFMTIESDGHNLFTSVAWDL
AHEQLVLADASGVVQVWNTYTESLLLKKKVAKAVTYIGPRKGQSLKALMG
FHSSKADGMIYGMSPSEGCFFRWKLVKADSSVLIGRHDESILGLGFQGAP
AYPIRRNPPSNDGGIDIAGRAGNMQKRTDRSEKNHVDESKGSCTGVVRTT
CNELEGTGLECDGDKRPTDQRGSHGNVGRVVEIHNSDTEASEEDTKEEEE
GEQEEKVGKEEEASFGLVILSASLNGVIRAWETLGKSEKYCMRHSGGAEV
TSMLVLPGGSILVTGTDDGSVRFWQLDTGAGESYKAHNNSVSALAAYSDQ
LGSLVLASAGFEGAIIIWRAHAKDGLKKDRVPTVDYCVRDAHRALDGMDG
EILCLAFVASDVPVLASAGNDRVVRCWRLRERTCILLLVLEGHEDSIEAL
VSDGLFLFSGSCDGAVRVWNVSNLEHEDDNVSLGDNSRHRGEMGRTEAMM
VGAFKAHPNGVSGIAVMTGERNRRADVVYAGRESHEAGGLIATCGKAEGI
VKIWDYTHVEDDGTCGRLITEFRSQDESLFNCVACTQDILGKPLLFAGTN
EGSILQLAYSGIDEGNIG*
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mRNA from alignment at Ecto-sp13_S_contig6184:1733..7626+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6184.16886.1 ID=mRNA_Ecto-sp13_S_contig6184.16886.1|Name=mRNA_Ecto-sp13_S_contig6184.16886.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5894bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6184:1733..7626+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATCTCGAGGTAGTCGAAGTCTTAGCGCTCGCGGGTGAGGGAGCGGC TGGCAGCCACTGGTCCCGCAACACTGCACGGCCTAGGTACTCGCTAGACA CGGACGAGGCCAAGCAAGCCAGCTTCCACCACTCCTTCACCTGTTTCGAC GTGGCGGAGAGAGTGGAGGCGGACCATGATATTGTCTTCGCAGGAAGGGT GGGTGAAGGTGTCTCTGTTGTGCGATTCCCGATTGCTGTCCGCAGTGCCT TATACTCTGCAGTGGCGCCTCTGCAAGATACCTGTGCCGATAACTCCTAC TCTTTTGAGACCGCATCACAGGCATGCCTCCCCCGTTGTTCTGCGGGGCT TGCATGCATCCAGATATAATACGTCGCTCTTGTTAGGGATCCGCCCTTGT TCACTGACCCCGTCGCGTACATCGATGGTGTATACTACTGTAGACGAGTC TACCGCTGCTGTAGTCTCGAATCATCGCGTGCTTGTTTGTGCCTATCATC TTGTGCCGTGTTACAGAGCAACGGAGCAGTTGTGCTTTGGCGGATGGTTG CCCGCAATATGTTTGGCGGGGCGAACAAGAACGACCGCGTGGAGGAGCCC CTCGTCACCGCCTCACCTCATCGGGGCGCCGTCACCTGCCTAACGCACAC CCGTCATGGCACCTACGGCTCCTTGATAGGGCCACTGATGTTCAGCGGAT CAACTGACCATACTATCAAGGTGCGTTGTCGCGCCTTGCAGCTGCATATT TCGACAGACACGATCCTCAGGAACCTCAAGGTTGGTCAGACAGCAGTAGC CACAACCAAAATGACGAAGGGGGGTCTTACTCGCAGCCGAAACCAGGTAG CTCGCGAAAGGCGCTCTCTACGCCGACGACGTACAAAATGATTTCCTCAT GCCAATCCGCCGTCGCGCCATACAAGGAAGGTGTGGGATGCATGGGCTGG TCCTCCGTTCAAAGAAGCCTGCCTACAGACGATGGCCGAGCACAGGGGTG GAGTGACGGCCCTAGCGTTTGCTGGAGACACAACGCTAATCTCTACAGCT CGAGACGGGAGTGTGCGACTATGGCGGCCGCAGCGGGGCCGAAAGCTCTT GCGCTTCCCTTTCTTCTGCTGCGTGAAGTGTTTATTCGTCTACCCTACAG CAGTGGGACGAGGCATGTCTAGGTCAATCGGTGAGCTCCGATGTTTTTCC TGATCTTGTGCTCTGTATCAAGAGAACGATGACTGCACTCAAACACCTGA TCAATTCCTTCGACATACCGGTCGGGATACTGCCGCAATTGAGTGTTCAC CACTTGGCTTCCCTACGAGAAAACATCTACATCGTGCGTGGTGAAACACG ACGTGCAGGGGCAGGACAACCAGGAGCTTTCGTGCATGTGTGGCCGACGG CAGCATGTGTTGCTGGTGGAGAGACCTGGACTTTCTACTGCGGCGACAGC AATGGAACGGTATCTGTTTTCCAACGAGCTCCAACATCTGCCGCGAAACG CCTGGCCAACGCAAGAAAAACTTCCGACAGCCTCACCATGAACCAGTGAG AATCGGGAACGCACTGTCTCGGTTTCGGTATGATCCAAAGTCGCTGCCTC GTGTAATCAAGATCCTTCCCGCTAGCTGCCAATGTTCCAATTTCGTTCTT CCACCGGGTCACCCATCGGCTTTAACTTGCGGTTGCTTGGTGGATAAAGC ATGGTTGTTTCGGTTCTTCCCCTGGACGTAAATGTATCAGGTTAGACAAA GCGGGCAATCTACGATCATAGCATGACGTTCTACCACCACGCTCCGGGCG CGTCGCTGATAACAGGTTGGCAGATGATGAAGTGACCCTCCACAGAAGGT GGACCCATCTGCACAGCCTTGCCATTACGGGGCTTGTTCTTGTGGCAGAA CACAACTTTCTTCTCAGCGTGGGGAATGACGGGGCTTGCCGAGTTCTCGA CTACCTACAGGTACGCTGCTATTCTCGTACATCTCCCGTAGCTGTGGGCG CTCCTCGTTGTTTTCATACAGACGTACACTGCTGCAACAGAGGAGGCGCT CCAGGAGTACGGGCGGCATGCCTCGAGTAGGGGTGATCGCCCCCTAGTGT TGTAGGGGCGCCTTGTCTCGCGGTTTTCATGAGTTAGACGGGATTAACAA GCAGTTTCTAGCTCGAACTCCACCACCGCGTCTGTGTGTCATGGGCGTTG GACTTTCTCTGAGATGGCAGGGAAACACCTTCATGACGATTGAGAGCGAC GGCCACAACCTTTTTACGTCCGTGGCGTGGGATCTAGCTCACGAGCAGCT CGTGCTAGCGGACGCTTCGGGTGTGGTACAAGTTTGGAACACTTATACGG AATCGGTACGTCTTCTCTCCGCCACGGTGTCAGGAAAAGCTATTACTTGA AACCGCGTGCATGTTTGAATTTTCACATGCGGGGCCAAGGCCGCATGTAG CATACGATTTCAACTTTTGAATCTGCGGTAGATGGTAAAGGTGTCGCTAT CGCATCGTCCAAACCTTTTGGGTGTCTGCAAAAGCTGAAATCGTAGTATG TTGGAGACAAATTTGCTGGAAATTCACACCATGTAGTATTGGGACAACAA TCTGTCATTTCTGATGCCCATGGAAGTCACTTGAACTTGTGGTAATATAC GAAAGAGTCAGCATCATAACATGTCACCTCCATCGTCAATGTTCGTTCTT GGCTGGCACCGCACGCAGCTTCTTCTCAAGAAAAAGGTGGCGAAAGCAGT CACGTACATCGGCCCTCGCAAAGGCCAATCGCTGAAGGCGTTGATGGGCT TTCACTCATCCAAGGCGGACGGCATGATTTACGGCATGTCTCCCTCGGAA GGCTGCTTCTTCCGATGGAAGCTGGTGCGAACCATGAGCAGACGATTCGC CACACTCTCTAGACCCGCAGTAGATACCTACGTGCCGTGTCTACCGCATT TAGGTCTCGAAAAAGTCGCACAAGTCTCTTCCTAAACATCGAAGTTATTC GCGGGGAGGGCGAGGCATTGACCATCGAGCATAGCCTTCGTCGTGTGTAC TCTAACAGTTAGCACGTAGGCCTCTCACACATGGATGTACTAGTGAGACA AGTGGTCTTGACTACTCCCGAACTTGCAAGCAAAATGTTTCCTCTACCGA AGAATAGATGATTAATCTTCCAATCCTATCCTGATTGCCGTTAAATCAGG TCAAAGCCGATAGCAGTGTCTTAATTGGGCGCCATGACGAAAGTATACTA GGCCTGGGCTTCCAGGGGGCACCGGCCTATCCCATTCGACGAAACCCCCC CTCCAACGATGGCGGGATCGATATCGCTGGTCGGGCTGGGAATATGCAAA AGCGTACAGACAGAAGCGAAAAAAATCATGTCGACGAGAGCAAGGGCAGC TGCACTGGCGTGGTGAGGACGACTTGCAACGAGCTTGAAGGAACAGGACT AGAATGCGACGGCGACAAACGACCAACAGACCAACGCGGTAGTCATGGTA ATGTGGGCAGGGTAGTAGAAATCCACAACAGCGACACAGAAGCATCGGAG GAGGACACGAAAGAGGAGGAGGAGGGGGAACAAGAGGAGAAAGTAGGGAA AGAGGAGGAGGCCAGCTTTGGGTTGGTGATCCTGTCGGCAAGCTTGAACG GTGTCATCAGGGCATGGGAGACGCTCGGAAAAAGCGAGAAGTACTGCATG CGGCATTCAGGAGGCGCAGAGGTGACAAGCATGCTCGTACTACCGGGAGG GTCTATCTTAGTCACAGGTATGATAAGAACGCGCTGGCAAGTGTGACTAC ACTAATACACTGACACCAACACATTCGCACGAGCGTGGTTGTTCCCGCGC CAAAGATTTCAAATAGCGGGGAAGTTCTTCGAAAAGTGCAGGCCACAGTA CAAGGTGCACATCGCTTTGTCAGAGGGAGAGTCGTCCCACAATACGGGCG TACAGTAGTCCGTAAGAGAAGCAAACAGCGTAGGGACAACAGAGGCGACA ACGATATTGTTGAGACGCCCAACAACTATTTTCATGGCGGGCGTTGAGTG CTGCTTTTCACTGCCTCAAACTGTAGCACATTCGTTTGATGGCGTTCCTT TATCAGGAACGGACGACGGAAGCGTGAGGTTCTGGCAACTAGACACAGGG GCAGGAGAATCATATAAAGCTCACAACAATAGCGTCAGTGCTCTCGCGGC GTATAGTGATCAACTGGGGTCGTTGGTGCTTGCCAGTGCGGGCTTTGAAG GCGCAATCATCATCTGGAGAGCGCACGCGAAGGATGGCCTGAAGAAAGAT CGAGTGAGGAAGCGCAGGTCGCAAAGTTATCGCTTGGACGGCATTTGTTC GCATGTTTCTCATGCGCCCGTTTCCCGTGCGCCTGTGTAACACCTGTCGC ATAATGCCCCGACCATGCATCTTCTGTGATCCCAGCACCAAGTAGTGTTG ACCAACCCCTGGGTCTTGTTTGTTCTCTTTCTAAGCCTCTATGTACCACC CTGCATGAACAGGTGCCGACGGTAGATTATTGCGTTCGTGACGCTCATCG CGCCTTGGACGGAATGGACGGCGAAATCCTTTGTTTAGCTTTCGTTGCTT CAGATGTGCCGGTGTTAGCCAGCGCGGGCAATGATCGCGTTGTGCGATGC TGGCGCCTCCGGGAGCGTACGTGCATCTTACTGCTGGTCCTAGAGGTGAG CACTGGCCTGATTACGTGCGACACGCTCGTGGTGATACTGCATTACCATT CGGGCGTAGTTCGAAAAACAGAAAATGTCGTTGCAATGGGTCCTTCGACT TCACGTGCTCTGCCACGTTCGCCCTCGGTTATACTTCTCCCGTACAGGGC CACGAGGATTCCATCGAAGCGCTAGTTTCTGACGGACTTTTCCTTTTTAG TGGAAGCTGTGATGGGGCCGTTCGAGTATGGAATGTCTCCAATCTTGAGC ACGAAGGTGTGTTGGAAATTTGAGTTTGTTTATGTGTTGGCGGCTTTGGT TTGATTCTTGGACGAATCTGGTACCTTTATCTTTGTCGAGCAGGCTCTTA AGGTATCACTGCACGCCTGCTGGACAGGTTGAACAACTTTACATCTGAGG CGCGACTCGTGTGTCTTTTCTCACTACACACAGACGACAACGTCAGTCTT GGAGACAATAGCAGACATCGGGGTGAAATGGGACGAACGGAAGCTATGAT GGTGGGGGCTTTCAAGGCGCATCCGAACGGAGTTTCTGGCATTGCCGTCA TGACCGGCGAGCGAAACCGCCGTGCTGACGTCGTTTACGCAGGACGAGAA TCACACGAGGCGGGAGGGTTGATCGCGACTTGCGGAAAGGCAGAGGGGAT CGTTAAAATATGGGATTACACGCATGTGGAAGATGACGGTACCTGCGGAA GGTAGGAATAGGGTTTGGAACGGCCAACAGCTTGATTGGTGTGTCGGTGT CAACCGATTCGGAGATGCACGAATAGCTCGTCCACGTGCATGATGCTGTA GGTCAGCCTCGCGAGGTATGCAGAGGACACTCTCCAAGCTTGGGAACCCG ATAATTACCTGGCGCAAAGAGCTTGGTTGAGGGGTTCATGCTTGTGCGTG CATCTGTACCGACCAGATCGCATACACACATCACAACTCAATACAGCGAA CTTTCCTCTTAACTCCTCCTTGTTCATCGCCCGGAATCCCTTACCCTCGC AATAGGCTCATCACCGAGTTTCGTTCTCAGGATGAGTCACTTTTCAACTG CGTCGCGTGCACCCAGGACATTTTGGGGAAGCCCCTATTGTTCGCCGGCA CCAACGAGGGCAGCATACTCCAGTTGGCTTACAGTGGCATCGATGAGGGA AACATAGGCTAGAAGATGAACGCGAGGTAGTTGACCAAAAATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6184:1733..7626+

>mRNA_Ecto-sp13_S_contig6184.16886.1 ID=mRNA_Ecto-sp13_S_contig6184.16886.1|Name=mRNA_Ecto-sp13_S_contig6184.16886.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2757bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6184:1733..7626+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATCTCGAGGTAGTCGAAGTCTTAGCGCTCGCGGGTGAGGGAGCGGC
TGGCAGCCACTGGTCCCGCAACACTGCACGGCCTAGGTACTCGCTAGACA
CGGACGAGGCCAAGCAAGCCAGCTTCCACCACTCCTTCACCTGTTTCGAC
GTGGCGGAGAGAGTGGAGGCGGACCATGATATTGTCTTCGCAGGAAGGAG
CAACGGAGCAGTTGTGCTTTGGCGGATGGTTGCCCGCAATATGTTTGGCG
GGGCGAACAAGAACGACCGCGTGGAGGAGCCCCTCGTCACCGCCTCACCT
CATCGGGGCGCCGTCACCTGCCTAACGCACACCCGTCATGGCACCTACGG
CTCCTTGATAGGGCCACTGATGTTCAGCGGATCAACTGACCATACTATCA
AGGTGTGGGATGCATGGGCTGGTCCTCCGTTCAAAGAAGCCTGCCTACAG
ACGATGGCCGAGCACAGGGGTGGAGTGACGGCCCTAGCGTTTGCTGGAGA
CACAACGCTAATCTCTACAGCTCGAGACGGGAGTGTGCGACTATGGCGGC
CGCAGCGGGGCCGAAAGCTCTTGCGCTTCCCTTTCTTCTGCTGCGTGAAG
TGTTTATTCGTCTACCCTACAGCAGTGGGACGAGGCATGTCTAGGTCAAT
CGGGGCAGGACAACCAGGAGCTTTCGTGCATGTGTGGCCGACGGCAGCAT
GTGTTGCTGGTGGAGAGACCTGGACTTTCTACTGCGGCGACAGCAATGGA
ACGGTATCTGTTTTCCAACGAGCTCCAACATCTGCCGCGAAACGCCTGGC
CAACGCAAGAAAAACTTCCGACAGCCTCACCATGAACCAGTTGGCAGATG
ATGAAGTGACCCTCCACAGAAGGTGGACCCATCTGCACAGCCTTGCCATT
ACGGGGCTTGTTCTTGTGGCAGAACACAACTTTCTTCTCAGCGTGGGGAA
TGACGGGGCTTGCCGAGTTCTCGACTACCTACAGGGAAACACCTTCATGA
CGATTGAGAGCGACGGCCACAACCTTTTTACGTCCGTGGCGTGGGATCTA
GCTCACGAGCAGCTCGTGCTAGCGGACGCTTCGGGTGTGGTACAAGTTTG
GAACACTTATACGGAATCGCTTCTTCTCAAGAAAAAGGTGGCGAAAGCAG
TCACGTACATCGGCCCTCGCAAAGGCCAATCGCTGAAGGCGTTGATGGGC
TTTCACTCATCCAAGGCGGACGGCATGATTTACGGCATGTCTCCCTCGGA
AGGCTGCTTCTTCCGATGGAAGCTGGTCAAAGCCGATAGCAGTGTCTTAA
TTGGGCGCCATGACGAAAGTATACTAGGCCTGGGCTTCCAGGGGGCACCG
GCCTATCCCATTCGACGAAACCCCCCCTCCAACGATGGCGGGATCGATAT
CGCTGGTCGGGCTGGGAATATGCAAAAGCGTACAGACAGAAGCGAAAAAA
ATCATGTCGACGAGAGCAAGGGCAGCTGCACTGGCGTGGTGAGGACGACT
TGCAACGAGCTTGAAGGAACAGGACTAGAATGCGACGGCGACAAACGACC
AACAGACCAACGCGGTAGTCATGGTAATGTGGGCAGGGTAGTAGAAATCC
ACAACAGCGACACAGAAGCATCGGAGGAGGACACGAAAGAGGAGGAGGAG
GGGGAACAAGAGGAGAAAGTAGGGAAAGAGGAGGAGGCCAGCTTTGGGTT
GGTGATCCTGTCGGCAAGCTTGAACGGTGTCATCAGGGCATGGGAGACGC
TCGGAAAAAGCGAGAAGTACTGCATGCGGCATTCAGGAGGCGCAGAGGTG
ACAAGCATGCTCGTACTACCGGGAGGGTCTATCTTAGTCACAGGAACGGA
CGACGGAAGCGTGAGGTTCTGGCAACTAGACACAGGGGCAGGAGAATCAT
ATAAAGCTCACAACAATAGCGTCAGTGCTCTCGCGGCGTATAGTGATCAA
CTGGGGTCGTTGGTGCTTGCCAGTGCGGGCTTTGAAGGCGCAATCATCAT
CTGGAGAGCGCACGCGAAGGATGGCCTGAAGAAAGATCGAGTGCCGACGG
TAGATTATTGCGTTCGTGACGCTCATCGCGCCTTGGACGGAATGGACGGC
GAAATCCTTTGTTTAGCTTTCGTTGCTTCAGATGTGCCGGTGTTAGCCAG
CGCGGGCAATGATCGCGTTGTGCGATGCTGGCGCCTCCGGGAGCGTACGT
GCATCTTACTGCTGGTCCTAGAGGGCCACGAGGATTCCATCGAAGCGCTA
GTTTCTGACGGACTTTTCCTTTTTAGTGGAAGCTGTGATGGGGCCGTTCG
AGTATGGAATGTCTCCAATCTTGAGCACGAAGACGACAACGTCAGTCTTG
GAGACAATAGCAGACATCGGGGTGAAATGGGACGAACGGAAGCTATGATG
GTGGGGGCTTTCAAGGCGCATCCGAACGGAGTTTCTGGCATTGCCGTCAT
GACCGGCGAGCGAAACCGCCGTGCTGACGTCGTTTACGCAGGACGAGAAT
CACACGAGGCGGGAGGGTTGATCGCGACTTGCGGAAAGGCAGAGGGGATC
GTTAAAATATGGGATTACACGCATGTGGAAGATGACGGTACCTGCGGAAG
GCTCATCACCGAGTTTCGTTCTCAGGATGAGTCACTTTTCAACTGCGTCG
CGTGCACCCAGGACATTTTGGGGAAGCCCCTATTGTTCGCCGGCACCAAC
GAGGGCAGCATACTCCAGTTGGCTTACAGTGGCATCGATGAGGGAAACAT
AGGCTAG
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