prot_Ecto-sp13_S_contig617.16869.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig617.16869.1
Unique Nameprot_Ecto-sp13_S_contig617.16869.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length114
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig617.16869.1 vs. uniprot
Match: A0A6H5KBW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW6_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 3.090e-41
Identity = 68/77 (88.31%), Postives = 69/77 (89.61%), Query Frame = 0 
Query:    2 RFQLNEEHVTPARPWNRPPDGXXXXXXXRNLVTVSLGDSGELDGYVVASTTCAPNGTPTVETVEVRQLTDRGLTHVQ 78
            RFQLNEEH+TPARPWNR PDG       RNLVTVSLGDSGELDGYVVASTTCAPNGTPTVETVEVRQLTDRGLTHVQ
Sbjct:    3 RFQLNEEHITPARPWNRQPDGGGSGGGGRNLVTVSLGDSGELDGYVVASTTCAPNGTPTVETVEVRQLTDRGLTHVQ 79
[Close]
BLAST of mRNA_Ecto-sp13_S_contig617.16869.1 vs. uniprot
Match: D8LID1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID1_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 3.400e-34
Identity = 70/106 (66.04%), Postives = 76/106 (71.70%), Query Frame = 0 
Query:    2 RFQLNEEHVTPARPWNRPPDGXXXXXXXRNLVTVSLGDSGELDGYVVASTTCAPNGTPTVETVEVRQLTDRGLTHVQQISVKNLLTGGQSAVMRTWARVPMTGEDH 107
            RF+L+EE VTPARPWNRP  G XXXXXX N VTVSLG+S +LDGYVVA+TT APNG PTVETVEVRQLTD GLTH+Q                R W RVPMT ED 
Sbjct:   45 RFELDEEQVTPARPWNRPQHGGXXXXXXVNQVTVSLGESEQLDGYVVATTTSAPNGRPTVETVEVRQLTDGGLTHIQXXXXXXXXXXXXXXXXRVWVRVPMTHEDQ 150
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig617.16869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBW6_9PHAE3.090e-4188.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LID1_ECTSI3.400e-3466.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig617contigEcto-sp13_S_contig617:14130..15143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig617.16869.1mRNA_Ecto-sp13_S_contig617.16869.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig617 14130..15143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig617.16869.1 ID=prot_Ecto-sp13_S_contig617.16869.1|Name=mRNA_Ecto-sp13_S_contig617.16869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
FRFQLNEEHVTPARPWNRPPDGGGGGGGGRNLVTVSLGDSGELDGYVVAS
TTCAPNGTPTVETVEVRQLTDRGLTHVQQISVKNLLTGGQSAVMRTWARV
PMTGEDHLRLLAA*
back to top