mRNA_Ecto-sp13_S_contig61635.16861.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig61635.16861.1 vs. uniprot
Match: D7G780_ECTSI (Dual specificity phosphatase, catalytic domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G780_ECTSI) HSP 1 Score: 248 bits (633), Expect = 4.900e-74 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
Query: 10 MATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFDGGNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRWSFE 357
MATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFDGGNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRWSFE
Sbjct: 1 MATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFDGGNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRWSFE 116
BLAST of mRNA_Ecto-sp13_S_contig61635.16861.1 vs. uniprot
Match: A0A836CE08_9STRA (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE08_9STRA) HSP 1 Score: 173 bits (439), Expect = 5.400e-48 Identity = 77/114 (67.54%), Postives = 94/114 (82.46%), Query Frame = 1
Query: 10 MATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFDG-GNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRW 348
MATK+ D +FIGDAE+SQDPEFIELNKIT +INCAGRQLPNLWE+HGL YLTFPW C LFDG N+V++QIT+FID A G+S+LVHSL+G RC+AC +YLM+++RW
Sbjct: 1 MATKLTDCVFIGDAESSQDPEFIELNKITHIINCAGRQLPNLWERHGLRYLTFPWDDTEACILFDGHANIVVKQITSFIDGATAAGESILVHSLEGTSRCVACAMSYLMYKFRW 114
BLAST of mRNA_Ecto-sp13_S_contig61635.16861.1 vs. uniprot
Match: A0A8J2WZF7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZF7_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.530e-41 Identity = 70/120 (58.33%), Postives = 86/120 (71.67%), Query Frame = 1
Query: 10 MATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFD----GGNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRWSFE 357
MAT+I DG+F+ D E+SQD EF+E+NKI++VINCAGRQLPNLW HG+ YLTF W +P LFD G VV EQI F+DEA G++VL+HSL G GR +AC AYLM +Y W E
Sbjct: 1 MATRIKDGIFVADGESSQDGEFVEMNKISYVINCAGRQLPNLWAPHGIRYLTFSWEDEPSYRLFDAHDTGRCVVAEQICAFVDEALISGEAVLIHSLRGTGRAVACALAYLMHKYEWGLE 120
BLAST of mRNA_Ecto-sp13_S_contig61635.16861.1 vs. uniprot
Match: A0A5A8DTZ8_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DTZ8_CAFRO) HSP 1 Score: 127 bits (320), Expect = 1.620e-34 Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 1
Query: 10 MATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFDGGNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRWS 351
MA K+ DGLF+GDAEA+QD +F+ NKI +INC+GRQ PNL+E G+ YLT+ W +C +FD N V+++I +FI++ G SVLVHS DG R C Y M +YRW+
Sbjct: 1 MAAKLKDGLFLGDAEAAQDIDFLAANKILKIINCSGRQAPNLYEAAGVRYLTYFWPQSGNCIIFDESNAVLDEIYSFIEDTLADGLSVLVHSTDGVSRACFCACIYFMLKYRWT 114
BLAST of mRNA_Ecto-sp13_S_contig61635.16861.1 vs. uniprot
Match: A0A5A8DIH3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DIH3_CAFRO) HSP 1 Score: 127 bits (320), Expect = 2.510e-34 Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 1
Query: 10 MATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFDGGNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRWS 351
MA K+ DGLF+GDAEA+QD +F+ NKI +INC+GRQ PNL+E G+ YLT+ W +C +FD N V+++I +FI++ G SVLVHS DG R C Y M +YRW+
Sbjct: 1 MAAKLKDGLFLGDAEAAQDIDFLAANKILKIINCSGRQAPNLYEAAGVRYLTYFWPQSGNCIIFDESNAVLDEIYSFIEDTLADGLSVLVHSTDGVSRACFCACIYFMLKYRWT 114
BLAST of mRNA_Ecto-sp13_S_contig61635.16861.1 vs. uniprot
Match: A0A7S1J120_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J120_9EUGL) HSP 1 Score: 128 bits (322), Expect = 9.330e-34 Identity = 57/116 (49.14%), Postives = 82/116 (70.69%), Query Frame = 1
Query: 10 MATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFDGGNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRWSFE 357
+A +I DGLF+G++ +SQD EF+ LNK++ +INCA + PNL++Q G++YL+FPW P TLFD + + QI FI++ EKG+ VLVHS DG RC + V+AYLM ++ WS
Sbjct: 5 LAVRIKDGLFVGNSISSQDDEFLFLNKVSHIINCAATESPNLYQQAGVNYLSFPWRDSPTTTLFDPEDRNVAQIYQFIEKGLEKGECVLVHSRDGISRCCSVVAAYLMLKFGWSLN 120
BLAST of mRNA_Ecto-sp13_S_contig61635.16861.1 vs. uniprot
Match: A0A7S3ID03_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium inclinatum TaxID=197538 RepID=A0A7S3ID03_9SPIT) HSP 1 Score: 121 bits (304), Expect = 4.890e-33 Identity = 56/113 (49.56%), Postives = 79/113 (69.91%), Query Frame = 1
Query: 13 ATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFDGGNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRWS 351
A KI DGLFIGD+ A+QD EF+ NK+T ++NCAG+Q+PN WE G+ YLTF W + T+FD + + I +FI+ A +K +SVLVHS+ G+ R + ++AY M +YRWS
Sbjct: 4 AIKIKDGLFIGDSFAAQDQEFVVANKVTHIVNCAGKQVPNHWEGRGVVYLTFQWMDLENQTIFDAKDTTTKAIFDFIENAIKKYESVLVHSVRGQSRSSSVLAAYFMRKYRWS 116
BLAST of mRNA_Ecto-sp13_S_contig61635.16861.1 vs. uniprot
Match: I7M3W2_TETTS (Dual specificity phosphatase domain protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7M3W2_TETTS) HSP 1 Score: 129 bits (323), Expect = 3.210e-32 Identity = 58/113 (51.33%), Postives = 78/113 (69.03%), Query Frame = 1
Query: 13 ATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFDGGNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRWS 351
A KI DGLFIGD A+QD EF+ NK+T +INCAG+ + N+WEQ G+ YLTFPWT LFD + ++ +I FIDEAAE G+S LVHS+ G+ R +++Y M +Y W+
Sbjct: 20 AIKIKDGLFIGDEYAAQDLEFVITNKVTHIINCAGQSIGNIWEQIGVMYLTFPWTQSDQQILFDEQDEILNEIVKFIDEAAEAGESTLVHSVKGQSRACCVLASYFMKKYNWA 132
BLAST of mRNA_Ecto-sp13_S_contig61635.16861.1 vs. uniprot
Match: UPI001CFE3462 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFE3462) HSP 1 Score: 120 bits (302), Expect = 3.300e-32 Identity = 52/116 (44.83%), Postives = 79/116 (68.10%), Query Frame = 1
Query: 10 MATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFDGGNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRWSFE 357
+A +I DGLF+G++ A+QD EF+ NK++ ++NCAG + N++ +HG+ YLTFPW P L D + I +++NFID+A EKG+ VLV SL G R ++AY +++Y WS E
Sbjct: 52 LAVRIMDGLFVGNSIAAQDDEFLFSNKVSHIVNCAGLEAANIFAEHGVEYLTFPWRDVPTTVLLDSRDRNITRVSNFIDQAFEKGECVLVQSLHGNSRSCVIIAAYFIYKYGWSLE 167
BLAST of mRNA_Ecto-sp13_S_contig61635.16861.1 vs. uniprot
Match: A0A7J6RFI4_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RFI4_PEROL) HSP 1 Score: 124 bits (310), Expect = 6.740e-32 Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 13 ATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYLTFPWTSDPDCTLFDGGNVVIEQITNFIDEAAEKGDSVLVHSLDGRGRCIACVSAYLMFRYRWSFE 357
A K+ DGLFIGD A+Q+ EF+ NK+T VINC GRQ+PN WE G+ YLT+ W + + D +VV++++T F+DEA + +SVL+HS G+GR + AYLM +YRW
Sbjct: 25 AVKVKDGLFIGDEMAAQELEFVVTNKVTHVINCCGRQIPNHWEPIGVVYLTYYWLDNDSQVVLDARDVVVDEVTAFVDEALDNAESVLIHSERGQGRSCTVLCAYLMRKYRWGMR 139 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig61635.16861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig61635.16861.1 >prot_Ecto-sp13_S_contig61635.16861.1 ID=prot_Ecto-sp13_S_contig61635.16861.1|Name=mRNA_Ecto-sp13_S_contig61635.16861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp MATKINDGLFIGDAEASQDPEFIELNKITFVINCAGRQLPNLWEQHGLHYback to top mRNA from alignment at Ecto-sp13_S_contig61635:3..806- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig61635.16861.1 ID=mRNA_Ecto-sp13_S_contig61635.16861.1|Name=mRNA_Ecto-sp13_S_contig61635.16861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=804bp|location=Sequence derived from alignment at Ecto-sp13_S_contig61635:3..806- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig61635:3..806- >mRNA_Ecto-sp13_S_contig61635.16861.1 ID=mRNA_Ecto-sp13_S_contig61635.16861.1|Name=mRNA_Ecto-sp13_S_contig61635.16861.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=348bp|location=Sequence derived from alignment at Ecto-sp13_S_contig61635:3..806- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |