prot_Ecto-sp13_S_contig6163.16860.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6163.16860.1
Unique Nameprot_Ecto-sp13_S_contig6163.16860.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1193
Homology
BLAST of mRNA_Ecto-sp13_S_contig6163.16860.1 vs. uniprot
Match: D7FXF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF5_ECTSI)

HSP 1 Score: 1142 bits (2955), Expect = 0.000e+0
Identity = 884/1199 (73.73%), Postives = 910/1199 (75.90%), Query Frame = 0
Query:    1 MKVPNMRHLRAMRPTXXXXXXXXX--ARDALPLGGPFLDVLNNSNQGRDLSSPRASVSTDPSDTPSSSLTSLGDGSGGSVPQLGQLTPKSLAPGADGTXXXXXXXXXXXXX-TQGTTSTSHRTAETPADVAWPSLGARNNSNIDNCHPDKKVAVRQREGNESSLVHLRGSPRRRRGGRDDANWPSDRTQLGAKIASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGG-----------------------------------------------------GPGQRFGATAWPKLRGGXXXXXXXXXXXXXXXXXXXXXXXXVREAGERGTASTSRRPAGGRDGEGGERWRLSGPADCSWQSPSLHTGSPDAASSRPPSREGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAAGAATRGPSLRDRPARWAAKGGGSSMWSPLRAPGAPRGVTGNAGNSHSTKNSTSSSGNATSGKNSPGRSVSSRFSPSRRGGGLPRAGRGGGDAAASSRSRGGEDGDGEEAPMFELTSVFQATPASSSVSSRPRGSGGHTPGGRWRGSQHSMVRAGQHAGCSSAGAAAAA----GTPPSFDPTRLAARPRPVG-ETAEELQEVEEVEDV------GSDDYGEDDGEGLLNSNACEVADGDWGASQEGRGGDGWREGDDGAGGGVVDYEDQLLGEEGGGDAAATRLDVRLQQQQQRRLRPSGAAGMEGENPERARAVAPSGSAMDPTGTGRSAEDEPGVE-EAVSDSRQLGTLPGKTPGAEAGTATAVVAVSPVAARRPRRVTDTAAEATPTPAAVETPRGAKRRHHEQQAERQEGRQSEPNKDRSSPPPRTPVRPPRTMFAPSSFGRSGPTSSSXXXXXXXXXXXXXXGGKWRPSFGSAGGARGGGQSPAAGAMHAPRAAFSTPARDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NGPLGRLLQQVRARCDGDEARLLSGEFPFRQPSSASKATXXXXXXXXXXX-VGVGXXGSTAKSRRDHGDPRTRCSVALDATVMLPAATPRGPSVGFEGGLWGGGEGNRLGQAGDGGASGLVRFSCFVHHVVDVSLSLVGSRVRPGSRRATSAAGDAAGSSSVATDFGRLHRLKGVRVDALFKQDTRRAVDVGPGSQLRIYDPFCVWYDAE 1128
            MKVPNMRHLRAMRPTXXXXXXXXX  A DA PLGGPF D+LNNSNQGRDLSS RASVSTDP DTPSSS  S                     PGADGT              TQGT STSHRTAETPA V WPSLGAR+NS+ +N     K AV Q EG+ESSL+HLRGSPRRRRG RDDA+ PSDRTQLGAK AS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                        GPGQRFGATAWPKLRGGXXXXXXXXXXXXXXXXXXXXXXXXVREAG RGTASTS RPAGGRDGEGGER RLSG ADCSW SPSLHTGSPDAASSRPPSR+GH  XXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAAGAATRGPSLRDRPARWAAKGGGSS+WSPLRAPGAPRG TGNAGNS+S KNSTSS GNA SGKNSPGRSVSSRFSPSRRG GLPR GRGGGDAAASSRSRGGEDG+GEEAP FELTSVFQATPASSSVS RPRGSGGHTPGGRWRGSQH +VRAGQ AGCSS           GTPPSFDPTRLAARPRPVG ET EELQ              GSDDYGED GEG L+SNAC+VADGD GASQEGRGG+GWRE D GA                                                                     RS ED PGV+ EAV DSR+LGTLPG+TPGAEAGTA   +A+SP AARRP+RV DTAAEAT T AAVETPRGAKRRHHEQQAERQ GRQSEP KDRSSPPPRTPVRPPRTMFAPS+FGRSGPT+SS              GGKWRPSFGSA GARGGGQSPAAGAMHAPRAAFSTPARDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NGPLGRLLQQVRARCDGDEARLLSGEFPFRQPSSASKAT  XXXXX     VGVGXX    KSRRD GDPRTRC VALDATVMLPAATPRGPSVGFEGGLWGGGEGN LGQAG GG +GLVRFSCFVHHVVDVSLSL GSRV PGSRR TSA G AAG S VATDFGRLHRL+GVRVD +FKQDTRRAVDVGPGSQLRIYDP CVWYDAE
Sbjct:   94 MKVPNMRHLRAMRPTXXXXXXXXXXXAGDAFPLGGPFHDLLNNSNQGRDLSSTRASVSTDPGDTPSSSTASXXXXXXXXXXXXXXXXXXXXXPGADGTGVGGVGAGDDDGVATQGTMSTSHRTAETPAAVTWPSLGARDNSSNNNHAGVNKAAVHQPEGSESSLMHLRGSPRRRRGCRDDASRPSDRTQLGAKTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGQRFGATAWPKLRGGXXXXXXXXXXXXXXXXXXXXXXXXVREAGGRGTASTSGRPAGGRDGEGGERRRLSGAADCSWHSPSLHTGSPDAASSRPPSRQGHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAAGAATRGPSLRDRPARWAAKGGGSSVWSPLRAPGAPRGGTGNAGNSYSNKNSTSSCGNAVSGKNSPGRSVSSRFSPSRRGAGLPRTGRGGGDAAASSRSRGGEDGEGEEAPTFELTSVFQATPASSSVSPRPRGSGGHTPGGRWRGSQHPVVRAGQRAGCSSGXXXXXXXXXXGTPPSFDPTRLAARPRPVGGETEEELQXXXXXXXXXXXXXXGSDDYGEDGGEGFLSSNACQVADGDRGASQEGRGGEGWREADGGAXXXXXXXX-------------------------------------------------------------RSGEDAPGVKKEAVPDSRRLGTLPGETPGAEAGTAMEALALSPAAARRPQRVNDTAAEATATAAAVETPRGAKRRHHEQQAERQGGRQSEPIKDRSSPPPRTPVRPPRTMFAPSTFGRSGPTASSAAAASTSASTT---GGKWRPSFGSASGARGGGQSPAAGAMHAPRAAFSTPARDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPLGRLLQQVRARCDGDEARLLSGEFPFRQPSSASKATTSXXXXXGHLDDVGVGXXXXGGKSRRDPGDPRTRCRVALDATVMLPAATPRGPSVGFEGGLWGGGEGNELGQAGGGGVTGLVRFSCFVHHVVDVSLSLGGSRVSPGSRRVTSAVGYAAGPSGVATDFGRLHRLEGVRVDGIFKQDTRRAVDVGPGSQLRIYDPCCVWYDAE 1228          
BLAST of mRNA_Ecto-sp13_S_contig6163.16860.1 vs. uniprot
Match: A0A6H5LC46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC46_9PHAE)

HSP 1 Score: 896 bits (2315), Expect = 1.110e-313
Identity = 567/657 (86.30%), Postives = 582/657 (88.58%), Query Frame = 0
Query:  541 MVRAGQHAGCSSAGAAAAAGTPPSFDPTRLAARPRPVGETAEELQEVEEVEDVGSDDYGEDDGEGLLNSNACEVADGDWGASQEGRGGDGWREGDDGAGGGVVDYEDQLLGEEGGGDAAATRLDVRLQQQQQRR-----LRPSGAAGMEGENPERARAVAPSGSAMDPTGTGRSAEDEPGVEEAVSDSRQLGTLPGKTPGAEAGTATAVVAVSPVAARRPRRVTDTAAEATPTPAAVETPRGAKRRHHEQQAERQEGRQSEPNKDRSSPPPRTPVRPPRTMFAPSSFGRSGPTSSSXXXXXXXXXXXXXXGGKWRPSFGSAGGARGGGQSPAAGAMHAPRAAFSTPARDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPLGRLLQQVRARCDGDEARLLSGEFPFRQPSSASKATXXXXXXXXXXXVGVGXXGSTAKSRRDHGDPRTRCSVALDATVMLPAATPRGPSVGFEGGLWGGGEGNRLGQAGDGGASGLVRFSCFVHHVVDVSLSLVGSRVRPGSRRATSAAGDAAGSSSVATDFGRLHRLKGVRVDALFKQDTRRAVDVGPGSQLRIYDPFCVWYDAEVGGEGGRAEALLVCTQLCEPYPSCLPALPSPXXXXXXGRGSPSHEGGGDEGSRTTDTAAASALT 1192
            MVRA Q AGCSS GAAAAAGTPPSFDPTRLAARPRPVGETAEELQEVEEVEDVGSDD+GEDDGEG LNSNACEVADGDWGAS+EGRGGDGWRE D GAGGGVVDYEDQLLGEEGGGDAAATRLDVRLQ           LRPSGAAG+EGENPERARAVAPSG AMDPTG+GRSAEDEPGVE AV DS +LGTL  +TPGAEAGTAT  +A+SP AARRP+RV DTAAEA  T AAVETPRGAK R HEQQAERQ GR  EPN+DRSSPPPRTPVRPPRTMFAPSSFGRS PTS  XXXXXXXXXXXXXXGGKWRPSFGSAGGARGGGQS AAGA HAPRAAFSTPARD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPLGRLLQQVRARCDGDEARLLSGEFPFRQPSSASK+T           VGV XX S AKSRRD+GDPRTRCSVALDATVMLPAATPRG SVGFEGGLWGGGEGN LGQAG GGASGLV FSCFVHHVVDVSL L G+RVRPGSR ATSAAGDAAG SSVATDFG LHRL+GVRVD LFKQDTRRAVDVGPGSQLRIYDP CVWYDAEVGGEGGRAEALLVCTQLCEPYPSCLPALPSPXXXXXX      H+GG  EGSRTT TAAASALT
Sbjct:    1 MVRARQRAGCSSGGAAAAAGTPPSFDPTRLAARPRPVGETAEELQEVEEVEDVGSDDHGEDDGEGFLNSNACEVADGDWGASREGRGGDGWREADGGAGGGVVDYEDQLLGEEGGGDAAATRLDVRLQXXXXXXXXXXXLRPSGAAGIEGENPERARAVAPSGRAMDPTGSGRSAEDEPGVE-AVPDSHRLGTLSDETPGAEAGTATEALAMSPAAARRPQRVNDTAAEAAATAAAVETPRGAKGRRHEQQAERQGGRHREPNRDRSSPPPRTPVRPPRTMFAPSSFGRSAPTSXXXXXXXXXXXXXXXXGGKWRPSFGSAGGARGGGQSLAAGATHAPRAAFSTPARDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPLGRLLQQVRARCDGDEARLLSGEFPFRQPSSASKSTTGGNNNSHLDGVGVXXXXSGAKSRRDYGDPRTRCSVALDATVMLPAATPRGSSVGFEGGLWGGGEGNELGQAGRGGASGLVWFSCFVHHVVDVSLGLGGNRVRPGSRCATSAAGDAAGWSSVATDFGCLHRLEGVRVDGLFKQDTRRAVDVGPGSQLRIYDPSCVWYDAEVGGEGGRAEALLVCTQLCEPYPSCLPALPSPXXXXXXXXXXXXHQGGRGEGSRTTGTAAASALT 656          
BLAST of mRNA_Ecto-sp13_S_contig6163.16860.1 vs. uniprot
Match: A0A6H5L526_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L526_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 3.780e-68
Identity = 147/198 (74.24%), Postives = 154/198 (77.78%), Query Frame = 0
Query:    1 MKVPNMRHLRAMRPTXXXXXXXXX----ARDALPLGGPFLDVLNNSNQGRDLSSPRASVSTDPSDTPSSSLTSLGDGSGGSVPQLGQLTPKSLAPGADGTXXXXXXXXXXXXXTQGTTSTSHRTAETPADVAWPSLGARNNSNIDNCHPDKKVAVRQREGNESSLVHLRGSPRRRRGGRDDANWPSDRTQLGAKIASS 194
            ++VPNMRHLRAMRPT    XXXXX    A DA PLGGPF D+LNNSNQGRDLSSPRASVSTDPSDTPSSS  SLGDGSGGSVP LGQLTP SL  GADG              TQGT  TSHRTAETP  VAWPSLGAR+NSN +N H   KVAVRQREGNESSLVHLR SPRRRRGGRDDAN PS+RTQL  K+ASS
Sbjct:   75 LQVPNMRHLRAMRPTPTRAXXXXXXXXXAGDAFPLGGPFHDLLNNSNQGRDLSSPRASVSTDPSDTPSSSTASLGDGSGGSVPPLGQLTPPSLPAGADGAGVGVGAGDDGSA-TQGTMFTSHRTAETPVAVAWPSLGARDNSN-NNTHAGIKVAVRQREGNESSLVHLRDSPRRRRGGRDDANRPSNRTQLEGKMASS 270          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6163.16860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FXF5_ECTSI0.000e+073.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LC46_9PHAE1.110e-31386.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L526_9PHAE3.780e-6874.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..1192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6163contigEcto-sp13_S_contig6163:765..7885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6163.16860.1mRNA_Ecto-sp13_S_contig6163.16860.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6163 2..8049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6163.16860.1 ID=prot_Ecto-sp13_S_contig6163.16860.1|Name=mRNA_Ecto-sp13_S_contig6163.16860.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1193bp
MKVPNMRHLRAMRPTPTPAAAAAAARDALPLGGPFLDVLNNSNQGRDLSS
PRASVSTDPSDTPSSSLTSLGDGSGGSVPQLGQLTPKSLAPGADGTGMGG
VGAGDDGAATQGTTSTSHRTAETPADVAWPSLGARNNSNIDNCHPDKKVA
VRQREGNESSLVHLRGSPRRRRGGRDDANWPSDRTQLGAKIASSSPPSTA
AAAAAAGWGRQGPRKPTTPTSSSPAAVATGVAAGVAAACSAGGAKRKRPA
SATGGGPGQRFGATAWPKLRGGAPPPPPRRREPQGGGGGGGGGGGGVREA
GERGTASTSRRPAGGRDGEGGERWRLSGPADCSWQSPSLHTGSPDAASSR
PPSREGHGNGNSKGKGPALRGDGGGGAGVNVGVGGGGTKAAGAATRGPSL
RDRPARWAAKGGGSSMWSPLRAPGAPRGVTGNAGNSHSTKNSTSSSGNAT
SGKNSPGRSVSSRFSPSRRGGGLPRAGRGGGDAAASSRSRGGEDGDGEEA
PMFELTSVFQATPASSSVSSRPRGSGGHTPGGRWRGSQHSMVRAGQHAGC
SSAGAAAAAGTPPSFDPTRLAARPRPVGETAEELQEVEEVEDVGSDDYGE
DDGEGLLNSNACEVADGDWGASQEGRGGDGWREGDDGAGGGVVDYEDQLL
GEEGGGDAAATRLDVRLQQQQQRRLRPSGAAGMEGENPERARAVAPSGSA
MDPTGTGRSAEDEPGVEEAVSDSRQLGTLPGKTPGAEAGTATAVVAVSPV
AARRPRRVTDTAAEATPTPAAVETPRGAKRRHHEQQAERQEGRQSEPNKD
RSSPPPRTPVRPPRTMFAPSSFGRSGPTSSSAAAATAAATSASTTGGKWR
PSFGSAGGARGGGQSPAAGAMHAPRAAFSTPARDRDRDRDGVAMPPSGSL
GTGATGSASARRRKGSGAGNGPLGRLLQQVRARCDGDEARLLSGEFPFRQ
PSSASKATTGGNNNSHFDDVGVGGGGSTAKSRRDHGDPRTRCSVALDATV
MLPAATPRGPSVGFEGGLWGGGEGNRLGQAGDGGASGLVRFSCFVHHVVD
VSLSLVGSRVRPGSRRATSAAGDAAGSSSVATDFGRLHRLKGVRVDALFK
QDTRRAVDVGPGSQLRIYDPFCVWYDAEVGGEGGRAEALLVCTQLCEPYP
SCLPALPSPPPPPPTGRGSPSHEGGGDEGSRTTDTAAASALT*
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