|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig616.16855.1 vs. uniprot
Match: A0A6H5JI84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI84_9PHAE) HSP 1 Score: 1270 bits (3287), Expect = 0.000e+0 Identity = 737/943 (78.15%), Postives = 779/943 (82.61%), Query Frame = 1
Query: 316 MPLGPAGNIMSRNGHRDHDGGELHPRSKSIVAPTSPPRSSYPSREEGLTLVDRRHRSPHRCTPEIEGSRGLAVDKMTLSRSFLSRIFPEGTTSKVERERTESNDHQREEEGMAASTGAVRRASVGLQRDVDEVMGMVCRLHSRLSDAACWTKNLQEDTRASRRKVADLIAQVQHLSERTLLPITGTHEKWLPIISGSDTHDTGSHIGQPAAIRLSRRNNAERDDNGVDPTGDVGMRGQETNGRTNIETSEGGISRDVSPLASGPSSPASSRSSSASLSSQPGSKSRSPRPGSPFSQESCCGSMAPMYSPAFPSAATAAAATVDGVAVEVDANTGADGDNQRGKAEEINEGKDCPGDRRGDGTNSTRQRRGTKAMGSKEPETNIGRGREQRPLACRIDGKLAANLATHGGEGFGDVSEQRGAETQQLSKISNEITRRGKRRSRSRRRRVEPTAETSDDGGGRXXXXXXXGTKGGRETAQALSTPSSPRHHDGGGTSSLPSPRSDRDNQHERRVLPSSRQGSPPRGRRHXXXXXXXXXXRGDGSTNNDRRIERQAGVEVTVASKAGEKKEAVGDGGGEGAGDGRCDKDESLAEEGVLAEDGVGPNPTEAGHMLQALAGLSTTLRRLSRAEDNIEAPDNPDPVRTAEEMGGEGGQGDTPPACERCVVLSESLKSLRERARAQERLLEHSEKLLTVATSTAAPFDTPVRSAGQRDESRPTADAGRNGPIALCPGASADPATSVGVAADVAPIGQVEPAIRPAGNEDVPRDKQQPEAGSEYHASAARAGDEHGGARGADEENEKLLAAAEEVWRVSEMARSALQGELERKDEALSAATKTARESTEALSKQRQEVARLNDSLRNQEMETEKWKADAERSIAKAKDTRRVMEGAKVAAADVLRRSDRERKALMGEVDTLNEKISALRSRLGGVQTRRHAECELAAKKTE 3144
MPLGPAGNIMSRNGH DGGEL PRSK AP SPP+SSYPSREE LTLVDRR RS +RCTP+ EGSRGLAVDKMTL RSFL+R FPEGT S+ ERER+ESNDH REEEGMAASTGA+RRASV LQR VDEVMGMVCRLHSRLSDAACWTKNLQEDTRASRRKVADLI QVQHLSE TLLPITGTHE WL IISG+DTHD GSHIGQPAA RLSRRN+AERDD+ +P GDVG+RGQE NG T ET EG ISRDVSPLAS P SPAS RSSSAS+SSQ GSKSRS PFSQESCCGSMAPMYSPAFP+AA+AAAATVD AVEVDA+TG G + G A EI+EGK CPGDR GDGT+STRQRR TKAMGSKE ETNIG+GREQR LA R DGKLAAN+AT G E GDVSEQRGA QQL K+ RRGKRRSRSRRRRVE TA+ DDGG R TKGGRETAQALSTPSSPR+ GGGTSSL SP S RDNQ ER V PSSR GSPPRGRRH XXX RGDGSTNNDRR+ERQAGVE+ VASKAGEKKEAV DG G GAGDGRCDKD SLAEEGVLAEDGVGP+PTEAG+MLQ LAGLS TLRRLS AEDN P NPDPVRTAEE+GG+GG+GD PACERCVVLSESL+SLRERARAQERLLEHSEKLLT AT+TAA FD + SAGQRDES PTADAG +GPIAL PGASADP T GVAADVAP+GQVEPAIRPA NEDVPRD+QQPE G AEEVWRVSEMAR+ LQGELERKDEALSAATKTARES EALSKQRQEVARLND++RNQE ETEKWKADAERSIAK KDTRR ME AKVAAADVLRRS RERKALMGEV TLNEKI+ALRSRLGGVQTRR+AECELAAKKTE
Sbjct: 1 MPLGPAGNIMSRNGH---DGGELPPRSKPTAAPASPPKSSYPSREERLTLVDRRPRSSNRCTPDTEGSRGLAVDKMTLGRSFLTRTFPEGTISRAERERSESNDHHREEEGMAASTGALRRASVELQRHVDEVMGMVCRLHSRLSDAACWTKNLQEDTRASRRKVADLIDQVQHLSEGTLLPITGTHESWLRIISGTDTHDPGSHIGQPAATRLSRRNDAERDDDRFEPNGDVGVRGQEINGSTISETCEGRISRDVSPLASRPGSPASWRSSSASVSSQSGSKSRSSXXXXPFSQESCCGSMAPMYSPAFPAAASAAAATVDRAAVEVDADTGVGG--ETGTAAEIDEGKYCPGDRGGDGTSSTRQRRETKAMGSKESETNIGKGREQRTLARRDDGKLAANIATRGVERIGDVSEQRGAAAQQLPKVIYGSKRRGKRRSRSRRRRVESTADAIDDGGDRDGGGRGSDTKGGRETAQALSTPSSPRNDGGGGTSSLSSPPSGRDNQRERGVSPSSRSGSPPRGRRHRXXXRAKRRDRGDGSTNNDRRVERQAGVEIAVASKAGEKKEAVRDGDGGGAGDGRCDKDNSLAEEGVLAEDGVGPDPTEAGYMLQTLAGLSKTLRRLSCAEDNTLVPGNPDPVRTAEEVGGDGGRGDILPACERCVVLSESLESLRERARAQERLLEHSEKLLTAATTTAASFDARIHSAGQRDESCPTADAGGDGPIALGPGASADPTTPTGVAADVAPVGQVEPAIRPAENEDVPRDEQQPEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEVWRVSEMARNVLQGELERKDEALSAATKTARESKEALSKQRQEVARLNDAVRNQEKETEKWKADAERSIAKEKDTRRAMESAKVAAADVLRRSGRERKALMGEVHTLNEKITALRSRLGGVQTRRNAECELAAKKTE 938
BLAST of mRNA_Ecto-sp13_S_contig616.16855.1 vs. uniprot
Match: D7FL34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL34_ECTSI) HSP 1 Score: 1267 bits (3279), Expect = 0.000e+0 Identity = 740/995 (74.37%), Postives = 773/995 (77.69%), Query Frame = 1
Query: 1 MVVPRPTLLLEDDVLGLNDDVHVEWARTARARSSPAQGRSSPTYAEYLGGDSPYRQRCNSIVSHRTNLKVSAARKVDPRRTAVHALNAVEAAFAAAGGDAIPAANMPLGPAGNIMSRNGHRDHDGGELHPRSKSIVAPTSPPRSSYPSREEGLTLVDRRHRSPHRCTPEIEGSRGLAVDKMTLSRSFLSRIFPEGTTSKVERERTESNDHQREEEGMAASTGAVRRASVGLQRDVDEVMGMVCRLHSRLSDAACWTKNLQEDTRASRRKVADLIAQVQHLSERTLLPITGTHEKWLPIISGSDTHDTGSHIGQPAAIRLSRRNNAERDDNGVDPTGDVGMRGQETNGRTNIETSEGGISRDVSPLASGPSSPASSRSSSASLSSQPGSKSRSPRPGSPFSQESCCGSMAPMYSPAFPSAATAAAATVDGVAVEVDANTGADGDNQRGKAEEINEGKDCPGDRRGDGTNSTRQRRGTKAMGSKEPETNIGRGREQRPLACRIDGKLAANLATHGGEGFGDVSEQRGAETQQLSKISNEITRRGKRRSRSRRRRVEPTAETSDDGGGRXXXXXXXGTKGGRETAQALSTPSSPRHHDGGGTSSLPSPRSDRDNQHERRVLPSSRQGSPPRGRRHXXXXXXXXXXRGDGSTNNDRRIERQAGVEVTVASKAGEKKEAVGDGGGEGAGDGRCDKDESLAEEGVLAEDGVGPNPTEAGHMLQALAGLSTTLRRLSRAEDNIEAPDNPDPVRTAEEMGGEGGQGDTPPACERCVVLSESLKSLRERARAQERLLEHSEKLLTVATSTAAPFDTPVRSAGQRDESRPTADAGRNGPIALCPGASADPATSVGVAADVAPIGQVEPAIRPAGNEDVPRDKQQPEAGSEYHASAARAGDEHGGARGADEENEKLLAAAEEVWRVSEMARSALQGELERKDEALSAATKTARESTEALSKQRQEVARLNDSLRNQEMETEKWKADAERSIAKAKDTRRVMEGAKV 2985
MVVPRPTLLLEDDVLGL DDVH EWARTARARSSPAQGRSS A YLGG+SPYRQR GDAI ANMPLGPAGNIMSRNGHRDHDGGEL PRSKSIVAP SPPRSSYPSREE LTLVDR+ RSPHRCTP+ EGSRGLAVDKMTL RSFLSR FPEGTTSK ERER+ESNDH REEEGMA STGA+RRASVGLQRDVDEVMGMVCRLHSRLSDAACWTKNLQEDTRASRRKVADLIAQVQ+LSE TLLPITGTHEKWLPIISGSDTHDTGSHIGQPAA RLSRRN+AERDD+GVDPTGDVG+RGQETNG SSSASLSSQPGSKSRS PFSQESCCGSMAPMYSPAFP+AA AAAATVD VEVDA+TGA GDNQRG A EINEG+DCPGDRRGD T STRQRR T+AMGSKE TNIGRGREQRPLACR DGK+A NLA HGGE GDVS+QRGA QQL K+SNE RRGKRR XXXXXXX TKGGRETAQALST SSPRH DGGG SSL SPRS RDNQ ER V P+SR GSP RGRRH RGDGSTNNDRR+E QAGVE+TVASKA EKKEAVGDG G GRCDKD+SLAEEGVLAEDGVGP+P EAGHMLQALAGLSTTLRRLSRAEDN PDNPDPVRTAEE+ GEGG+GD PPACERCVVLSESL+SLRER RAQERLLEHSEKLLTVAT+TAAPFDT VRSAGQRDES PTADAG NGPIAL PGASADPA VGVAADV+P+G+VEPAIRPAGNEDVPR +QQPE GS++HAS AAAEEVWRVSEMAR+ALQGELERKDEALSAATKTARES EALSKQ E ETEKW+ADAERSIAK KDTRR ME AKV
Sbjct: 1 MVVPRPTLLLEDDVLGLKDDVHAEWARTARARSSPAQGRSSSANAGYLGGESPYRQR----------------------------------------GDAISTANMPLGPAGNIMSRNGHRDHDGGELPPRSKSIVAPVSPPRSSYPSREERLTLVDRQPRSPHRCTPDTEGSRGLAVDKMTLRRSFLSRTFPEGTTSKAERERSESNDHHREEEGMAVSTGALRRASVGLQRDVDEVMGMVCRLHSRLSDAACWTKNLQEDTRASRRKVADLIAQVQYLSEGTLLPITGTHEKWLPIISGSDTHDTGSHIGQPAATRLSRRNDAERDDDGVDPTGDVGVRGQETNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSASLSSQPGSKSRSSXXXXPFSQESCCGSMAPMYSPAFPAAAIAAAATVDHATVEVDADTGAGGDNQRGTAAEINEGEDCPGDRRGDRTKSTRQRRETEAMGSKESATNIGRGREQRPLACRDDGKMATNLAAHGGERIGDVSDQRGAAEQQLPKVSNESKRRGKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKGGRETAQALSTTSSPRHDDGGGASSLSSPRSGRDNQRERGVSPASRPGSPLRGRRHRRGRKDKRRDRGDGSTNNDRRVEWQAGVEITVASKAEEKKEAVGDGDGGXXXXGRCDKDDSLAEEGVLAEDGVGPDPNEAGHMLQALAGLSTTLRRLSRAEDNTVVPDNPDPVRTAEEVRGEGGRGDIPPACERCVVLSESLESLRERTRAQERLLEHSEKLLTVATTTAAPFDTRVRSAGQRDESCPTADAGSNGPIALGPGASADPAAPVGVAADVSPVGEVEPAIRPAGNEDVPRVEQQPEEGSKHHASXXXXXXXXXXXXXXXXXXXXXXAAAEEVWRVSEMARNALQGELERKDEALSAATKTARESKEALSKQ--------------EKETEKWQADAERSIAKEKDTRRAMESAKV 941
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 1 |
| Model size | 3144 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-05_006810.1 |
| Cds size | 3144 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681463858.1990812-CDS-Ecto-sp13_S_contig616:168..304 | 1681463858.1990812-CDS-Ecto-sp13_S_contig616:168..304 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig616 169..304 - |
| 1681463858.211223-CDS-Ecto-sp13_S_contig616:837..992 | 1681463858.211223-CDS-Ecto-sp13_S_contig616:837..992 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig616 838..992 - |
| 1681463858.222124-CDS-Ecto-sp13_S_contig616:1251..3276 | 1681463858.222124-CDS-Ecto-sp13_S_contig616:1251..3276 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig616 1252..3276 - |
| 1681463858.2328534-CDS-Ecto-sp13_S_contig616:3715..3869 | 1681463858.2328534-CDS-Ecto-sp13_S_contig616:3715..3869 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig616 3716..3869 - |
| 1681463858.2456532-CDS-Ecto-sp13_S_contig616:4500..5004 | 1681463858.2456532-CDS-Ecto-sp13_S_contig616:4500..5004 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig616 4501..5004 - |
| 1681463858.269166-CDS-Ecto-sp13_S_contig616:6060..6230 | 1681463858.269166-CDS-Ecto-sp13_S_contig616:6060..6230 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig616 6061..6230 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig616.16855.1 >prot_Ecto-sp13_S_contig616.16855.1 ID=prot_Ecto-sp13_S_contig616.16855.1|Name=mRNA_Ecto-sp13_S_contig616.16855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1048bp
MVVPRPTLLLEDDVLGLNDDVHVEWARTARARSSPAQGRSSPTYAEYLGG DSPYRQRCNSIVSHRTNLKVSAARKVDPRRTAVHALNAVEAAFAAAGGDA IPAANMPLGPAGNIMSRNGHRDHDGGELHPRSKSIVAPTSPPRSSYPSRE EGLTLVDRRHRSPHRCTPEIEGSRGLAVDKMTLSRSFLSRIFPEGTTSKV ERERTESNDHQREEEGMAASTGAVRRASVGLQRDVDEVMGMVCRLHSRLS DAACWTKNLQEDTRASRRKVADLIAQVQHLSERTLLPITGTHEKWLPIIS GSDTHDTGSHIGQPAAIRLSRRNNAERDDNGVDPTGDVGMRGQETNGRTN IETSEGGISRDVSPLASGPSSPASSRSSSASLSSQPGSKSRSPRPGSPFS QESCCGSMAPMYSPAFPSAATAAAATVDGVAVEVDANTGADGDNQRGKAE EINEGKDCPGDRRGDGTNSTRQRRGTKAMGSKEPETNIGRGREQRPLACR IDGKLAANLATHGGEGFGDVSEQRGAETQQLSKISNEITRRGKRRSRSRR RRVEPTAETSDDGGGRGGGGRGSGTKGGRETAQALSTPSSPRHHDGGGTS SLPSPRSDRDNQHERRVLPSSRQGSPPRGRRHRRSRRAKRRDRGDGSTNN DRRIERQAGVEVTVASKAGEKKEAVGDGGGEGAGDGRCDKDESLAEEGVL AEDGVGPNPTEAGHMLQALAGLSTTLRRLSRAEDNIEAPDNPDPVRTAEE MGGEGGQGDTPPACERCVVLSESLKSLRERARAQERLLEHSEKLLTVATS TAAPFDTPVRSAGQRDESRPTADAGRNGPIALCPGASADPATSVGVAADV APIGQVEPAIRPAGNEDVPRDKQQPEAGSEYHASAARAGDEHGGARGADE ENEKLLAAAEEVWRVSEMARSALQGELERKDEALSAATKTARESTEALSK QRQEVARLNDSLRNQEMETEKWKADAERSIAKAKDTRRVMEGAKVAAADV LRRSDRERKALMGEVDTLNEKISALRSRLGGVQTRRHAECELAAKKTE back to topmRNA from alignment at Ecto-sp13_S_contig616:169..6230- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig616.16855.1 ID=mRNA_Ecto-sp13_S_contig616.16855.1|Name=mRNA_Ecto-sp13_S_contig616.16855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6062bp|location=Sequence derived from alignment at Ecto-sp13_S_contig616:169..6230- (Ectocarpus species13 EcNAP12_S_4_19m) ATGGTCGTACCGCGGCCCACGCTCCTGCTCGAAGATGATGTCTTAGGGCT
CAACGACGACGTTCATGTAGAGTGGGCGCGAACAGCACGAGCCCGCTCGA
GCCCCGCACAGGGTCGTTCGAGTCCCACTTACGCTGAGTATCTGGGAGGC
GACTCGCCATACCGCCAACGGTGAGTACGTTCGCAGAACATGGTGCTGCT
GTTGGCACATACAGCAGTGAAACAAATGAGCTCTCATTGTTGCGTCCGTG
TGCAGTACCATACCAAAAAAAAGTGGACGTGTGTCCATTAGACTAATGGC
TGCTGTGCGTGGGGTCGTGGTGAGAGCTGTCATCGATGCCATGTTATCCT
TACAAGCTGCTCATGAAGCTCGTACATGAAGATTGGGCTCGTACTCAAAT
TAAACGCGGTGATCGACGGGTTGCGTATGCGCAGAGAGAGCTGTTTGCCA
CTCTCACCCTCCTTCGTCGATCGCACCATGGATGGTGGCGTTTGCATACA
TACCCTTGTACACTACACTTCATGTCTCGGTGTGGGTCGAGCAAGTCTTC
AGGTCTGGTTCTTCTCCGCCTGCTGCAACCCGTAAGTCATCTGCGAAGAA
ACAATTCGTCGCTCACCTCCACCTTGCCACAAGATGCAGGTACGCTGTAG
AAAGTGGGGTACCCCGAAAAGGCTGTGATGGGGCGGCGAATGTTGACCGC
CTTGTACACATATAGGGCAGCCACCTGGTTCAATATGTAGAATAGGTTGA
ATATTCTGTCTATGCCATACAATCTCACCCGTCAAATGAGGTCGATCGCC
TTATTCAGATCGCCTTGTTCGTGAACCCCCGCTGCACTGTACATTTCCTT
ACACCACCCCCTCTCACATGGAACATCTCTCATACTTGAGGAAAAAATGT
TGTTGCACATATTCATGTACGTAAAATTTTCTTGGTCATGGCGAGAATCC
AAATTCAGCGACCTAATCATTGGTCTGTGGAGGCAGCAGCATCATCATCA
GCAGCAGCAGCAGCAGCAGCAGCAAGAACGGCCATTCTTACAGTCTACCG
CATGTGTTGGAACCCAACCTTTCTCTGCGTGCGTCGACATACCACACAAA
CGCACGCCGACCACAACATGAGCTACGTATTACCGGATGCCCCAAGCATA
AGCGCTCGAGTCGCCACGGGTCGGGCCTGACCGACCACCAGCGTCATTCC
ATCACCGCGACTGCCTCGTCCCTCAGATGCAACAGCATTGTCTCGCACAG
GACCAATTTAAAGGTTTCGGCTGCGCGAAAGGTAGACCCGCGTCGAACCG
CCGTTCATGCGCTGAATGCCGTCGAAGCCGCATTCGCCGCTGCCGGTGGA
GACGCGATACCAGCCGCCAACATGCCTCTTGGTCCAGCAGGGAACATCAT
GAGTCGAAATGGCCATCGCGATCATGATGGAGGCGAGCTACACCCCAGAT
CGAAGTCGATCGTGGCACCAACATCGCCACCAAGAAGTAGTTACCCTTCC
CGCGAGGAAGGGCTGACGCTTGTAGACCGACGACACCGCTCACCACATCG
TTGCACACCGGAGATCGAAGGCAGTAGAGGCCTTGCGGTCGACAAAATGA
CACTTAGCCGATCGTTTCTGTCCCGGATATTTCCGGAGGGAACGACAAGT
AAGGTGGAGCGGGAACGTACCGAGTCGAACGACCACCAACGGGAAGAAGA
GGGCATGGCAGCGTCGACGGGTGCTGTGAGGTACGTCCCCACAACCGCTT
GCTTACGGCGCTGTATTCCTTGGATCGGACGGGCGAACCTCCGGGACCGT
GCACACGTCTCTGCTAACGTTTTGTGGGGCCCTGTAGTTCCTACTCAACG
CGATCTTAAACCAATTTGGATAGCGAGACAAGTTTTAGCCACCACATCTA
GCAGCTGTCTTGCTAGAACAACGACTGGCGTGCGGCAGCTTGCGATGTGA
AGCTTCAGGAGGTAGGGGCAGGGGACGCATGTGCTTCACTGGCCTTGGGG
AAGCCTTACCTATCTCTTTTCGAGCAAGTATCTCGTCGCAGACAGAATGG
GCTGAACGAAAGAAGCCCCCCCCCTGCCCCTTCTACACAGGAGGATCGCA
CCACCCCAAAGTTCTCGAAGTTATCACCCATCACCACGTCCATCTAAGCG
ACACTACCGTTCCACTTCACCCCGTCACAACCTTGGTACGCTTTCCGGGC
TTCAGAGAGGCATGGACGATGGGTAGACAAGTAACAAAGACCTAATTTGG
AGAGCTGTCCACACTTTCCTTGTCAGCGAATGCGTGCAACTCTGCTTCTG
TGTATGCACAACATACAAAACGGCTTGCATTCACGATTACCCTTCGGTGC
CGTTGATGCAGGCGAGCTTCTGTTGGGCTCCAGAGAGACGTAGACGAAGT
GATGGGTATGGTGTGTAGGCTCCACAGCCGGCTCTCTGACGCGGCCTGCT
GGACGAAGAACTTGCAGGAAGACACTCGAGCGTCCAGGCGAAAGGTCGCC
GATCTGATAGCCCAGGTAAATCTACCTTTGCTTCCTCCGATTTGGCTAGT
GGCAGCAAACCTGTGCCATAAGCATAGATGCATGTATCTCATGTATTTGT
TGCGTCCATACAGTCGTCCTGACTCGGTGTGCTTCAACGACTTGAAAGTA
GAGTCTAACAGGAAGGATATATTGTAGTCATCGGATCAACATCTCCCTGC
TGAATCGGTGTTGTTGCTGCTTCCCCTGTGACCTTGCTCGCGATTGCAAG
GGAATAATCTCCATCTCAGGGGTACCAGAAGCAGCGTACTATTGCGGTGC
AACACCTGGTTGTATCAGGTGTTGCCACGAGCATCGCACTACCGGAAGAT
TTCTCACTATGAGCAACCTACGGCCCACCCAACAGTGACGCCAAAATATT
TCCTTCTCTTCTGCTCCGTCCGTCTCCCGCTCCCGCCTACTTCTTTGCCT
TCAGGTGCAACATCTGTCTGAAAGAACGCTGCTACCCATCACCGGCACCC
ATGAAAAGTGGCTGCCGATCATCTCGGGCAGCGACACGCATGACACCGGC
AGCCACATCGGTCAGCCAGCAGCGATTAGACTTTCTCGCCGCAACAATGC
AGAAAGAGACGACAATGGCGTCGATCCTACCGGTGATGTTGGAATGAGAG
GCCAAGAGACAAACGGACGCACTAACATCGAAACAAGCGAGGGTGGGATA
TCTCGAGACGTCTCGCCTTTGGCATCTGGTCCCAGCTCACCCGCATCGTC
GCGGTCTAGTTCTGCTTCACTTTCGTCTCAGCCTGGCAGCAAGTCGCGAT
CACCTCGACCCGGGTCGCCTTTCTCGCAAGAGAGTTGTTGCGGCAGCATG
GCCCCGATGTACTCTCCCGCCTTTCCCTCTGCCGCGACTGCAGCTGCCGC
TACCGTCGACGGTGTCGCTGTCGAAGTCGATGCCAACACGGGTGCCGATG
GCGACAACCAGCGGGGTAAGGCAGAGGAGATAAACGAGGGCAAGGACTGT
CCTGGAGACCGTCGCGGCGACGGCACTAATTCTACCCGCCAGAGAAGAGG
GACTAAAGCAATGGGCTCCAAAGAACCCGAAACGAATATCGGGAGGGGTC
GTGAGCAACGGCCGCTGGCGTGTCGTATTGACGGAAAGCTGGCCGCTAAC
CTTGCAACACACGGCGGCGAGGGATTTGGGGACGTGTCCGAGCAACGCGG
AGCAGAGACGCAGCAGCTTTCCAAAATAAGCAACGAGATCACGAGGAGGG
GGAAACGACGATCGAGGTCGAGAAGGAGACGGGTGGAACCAACTGCCGAA
ACCAGCGATGACGGTGGTGGCAGGGGCGGCGGCGGCAGGGGCAGCGGCAC
AAAGGGGGGCCGAGAGACTGCGCAAGCCTTGTCAACCCCAAGCAGCCCTC
GACATCATGACGGTGGCGGCACGAGCTCACTTCCGTCCCCGCGCAGCGAT
AGGGACAATCAACACGAACGACGAGTGCTGCCGTCCTCGAGACAAGGCAG
CCCACCGCGCGGACGCCGTCATCGTCGGAGTAGAAGGGCTAAACGACGCG
ATCGGGGTGATGGCAGCACCAACAACGACAGGAGGATCGAACGGCAAGCA
GGGGTCGAAGTAACGGTGGCATCCAAGGCGGGGGAGAAGAAGGAGGCTGT
TGGTGATGGTGGCGGTGAAGGTGCTGGTGATGGGAGGTGCGACAAGGATG
AGAGTCTGGCCGAGGAAGGCGTGTTAGCGGAGGATGGCGTCGGACCGAAC
CCGACGGAAGCCGGGCACATGCTTCAGGCGCTCGCTGGCCTATCCACAAC
GCTGCGGCGACTGAGTCGTGCGGAGGACAACATAGAAGCCCCTGACAACC
CTGACCCCGTACGTACTGCAGAGGAGATGGGAGGCGAGGGAGGACAGGGC
GATACCCCTCCCGCGTGTGAACGCTGCGTAGTTCTCTCTGAGAGCTTGAA
AAGCTTGCGCGAGCGGGCCCGGGCGCAGGAGCGTCTCCTGGAACATTCTG
AGAAACTTCTTACGGTGGCCACGTCGACAGCGGCGCCATTTGACACCCCT
GTACGCTCAGCAGGGCAACGAGATGAGTCGCGTCCGACCGCAGACGCTGG
TCGCAACGGCCCGATAGCATTATGCCCGGGAGCATCAGCAGACCCAGCAA
CCTCGGTCGGCGTCGCAGCAGATGTTGCACCCATAGGCCAGGTAGAGCCT
GCCATCAGGCCCGCGGGGAACGAAGACGTTCCGCGGGACAAACAACAGCC
CGAGGCGGGCAGTGAATACCACGCATCAGCAGCAAGGGCGGGAGACGAGC
ACGGGGGGGCACGCGGAGCGGACGAAGAAAACGAGAAACTTCTCGCCGCT
GCTGAGGAGGTATGGAGAGTGTCGGAGATGGCGCGGAGTGCGTTGCAGGG
GGAGCTAGAGAGGAAGGACGAAGCTCTGTCCGCTGCGACCAAGACGGCGA
GGGAGTCCACGGAAGCGCTGTCGAAACAGGTTTGGCATCTCCTGTTCCAC
GTAGGGTTGGGGTTGTGTGAGAAGGTAACGTAATTTTTTATTTTGGTTTG
TGTAAAGATTTTCGTGCGCCAAACCTCCGTTGTCGTTGGGCTGTTCACGA
ATTGGACATGAACATGTGTCTCCCTATAGTACAATGCACGCGCACGCCCA
TGCTGCTTTCGTGCAACTATGGGACGATTGAGGGGACTGCCAACGTCCAG
CCCCGCCCTCGCAACATCGGCCTCGTCAATCGTGGTAGAGGCAAGAAGTG
GCTCGGTTGAACGACTCCCTGCGGAACCAGGAGATGGAGACCGAGAAGTG
GAAGGCAGACGCTGAGAGATCCATCGCCAAGGCCAAGGACACTCGACGAG
TGATGGAGGGCGCCAAGGTTGCTGCGGCTGATGTCTTGCGAAGGTGTTTC
ATGAGGCGTTACATGTTCATGAAGGATCCTGACATTTTTCCACATGCATT
ATAAATCTGACCTTCGCCAAGCACGCCGATGTTCTGAAATTTCTAACGGC
AAGGGAGCAGCCCGCGTGCTGCAATAAGAATAGTAAGTATAGCGATTTCG
GTCTCGCCGTTTGGGGCCTTTTTATTCGAACGGCGAGCGCTAGGAGCCTG
ATCTTTTCTCTCCATTTTTGTCCACGCCCTCCCCCAACAATGGTCAGTGC
ATCGCGTCAATGGCAGAGCATGCCATGCGGTAGCCCTTCCCTTCCGATAT
CTGTCTCGAAGGATATGCCGTCACGAAGTACAACTATCTTTTCATAAGAA
GGGTTCCAACAGCTGAGCCCACCACTCGATCAAGTACCGATTCTAGACGA
ACAGTGACCGATACCAGCCTATGGCGCACCGATCACATATCTTATTGCCC
TGGGCAATTGGTGTTGTGAGGAGTGACGAAGTGTTGAGAGAAGACGTCCT
CCTTTGGTGTCAATAAAAAATGTCAGGTCGGACAGGGAGAGGAAAGCGCT
CATGGGTGAAGTGGACACCCTCAACGAGAAGATCTCAGCCCTTCGGAGTC
GCCTGGGGGGCGTACAGACGAGGCGGCACGCGGAATGCGAGCTGGCAGCG
AAGAAAACGGAG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig616:169..6230- >mRNA_Ecto-sp13_S_contig616.16855.1 ID=mRNA_Ecto-sp13_S_contig616.16855.1|Name=mRNA_Ecto-sp13_S_contig616.16855.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3144bp|location=Sequence derived from alignment at Ecto-sp13_S_contig616:169..6230- (Ectocarpus species13 EcNAP12_S_4_19m) ATGGTCGTACCGCGGCCCACGCTCCTGCTCGAAGATGATGTCTTAGGGCT CAACGACGACGTTCATGTAGAGTGGGCGCGAACAGCACGAGCCCGCTCGA GCCCCGCACAGGGTCGTTCGAGTCCCACTTACGCTGAGTATCTGGGAGGC GACTCGCCATACCGCCAACGATGCAACAGCATTGTCTCGCACAGGACCAA TTTAAAGGTTTCGGCTGCGCGAAAGGTAGACCCGCGTCGAACCGCCGTTC ATGCGCTGAATGCCGTCGAAGCCGCATTCGCCGCTGCCGGTGGAGACGCG ATACCAGCCGCCAACATGCCTCTTGGTCCAGCAGGGAACATCATGAGTCG AAATGGCCATCGCGATCATGATGGAGGCGAGCTACACCCCAGATCGAAGT CGATCGTGGCACCAACATCGCCACCAAGAAGTAGTTACCCTTCCCGCGAG GAAGGGCTGACGCTTGTAGACCGACGACACCGCTCACCACATCGTTGCAC ACCGGAGATCGAAGGCAGTAGAGGCCTTGCGGTCGACAAAATGACACTTA GCCGATCGTTTCTGTCCCGGATATTTCCGGAGGGAACGACAAGTAAGGTG GAGCGGGAACGTACCGAGTCGAACGACCACCAACGGGAAGAAGAGGGCAT GGCAGCGTCGACGGGTGCTGTGAGGCGAGCTTCTGTTGGGCTCCAGAGAG ACGTAGACGAAGTGATGGGTATGGTGTGTAGGCTCCACAGCCGGCTCTCT GACGCGGCCTGCTGGACGAAGAACTTGCAGGAAGACACTCGAGCGTCCAG GCGAAAGGTCGCCGATCTGATAGCCCAGGTGCAACATCTGTCTGAAAGAA CGCTGCTACCCATCACCGGCACCCATGAAAAGTGGCTGCCGATCATCTCG GGCAGCGACACGCATGACACCGGCAGCCACATCGGTCAGCCAGCAGCGAT TAGACTTTCTCGCCGCAACAATGCAGAAAGAGACGACAATGGCGTCGATC CTACCGGTGATGTTGGAATGAGAGGCCAAGAGACAAACGGACGCACTAAC ATCGAAACAAGCGAGGGTGGGATATCTCGAGACGTCTCGCCTTTGGCATC TGGTCCCAGCTCACCCGCATCGTCGCGGTCTAGTTCTGCTTCACTTTCGT CTCAGCCTGGCAGCAAGTCGCGATCACCTCGACCCGGGTCGCCTTTCTCG CAAGAGAGTTGTTGCGGCAGCATGGCCCCGATGTACTCTCCCGCCTTTCC CTCTGCCGCGACTGCAGCTGCCGCTACCGTCGACGGTGTCGCTGTCGAAG TCGATGCCAACACGGGTGCCGATGGCGACAACCAGCGGGGTAAGGCAGAG GAGATAAACGAGGGCAAGGACTGTCCTGGAGACCGTCGCGGCGACGGCAC TAATTCTACCCGCCAGAGAAGAGGGACTAAAGCAATGGGCTCCAAAGAAC CCGAAACGAATATCGGGAGGGGTCGTGAGCAACGGCCGCTGGCGTGTCGT ATTGACGGAAAGCTGGCCGCTAACCTTGCAACACACGGCGGCGAGGGATT TGGGGACGTGTCCGAGCAACGCGGAGCAGAGACGCAGCAGCTTTCCAAAA TAAGCAACGAGATCACGAGGAGGGGGAAACGACGATCGAGGTCGAGAAGG AGACGGGTGGAACCAACTGCCGAAACCAGCGATGACGGTGGTGGCAGGGG CGGCGGCGGCAGGGGCAGCGGCACAAAGGGGGGCCGAGAGACTGCGCAAG CCTTGTCAACCCCAAGCAGCCCTCGACATCATGACGGTGGCGGCACGAGC TCACTTCCGTCCCCGCGCAGCGATAGGGACAATCAACACGAACGACGAGT GCTGCCGTCCTCGAGACAAGGCAGCCCACCGCGCGGACGCCGTCATCGTC GGAGTAGAAGGGCTAAACGACGCGATCGGGGTGATGGCAGCACCAACAAC GACAGGAGGATCGAACGGCAAGCAGGGGTCGAAGTAACGGTGGCATCCAA GGCGGGGGAGAAGAAGGAGGCTGTTGGTGATGGTGGCGGTGAAGGTGCTG GTGATGGGAGGTGCGACAAGGATGAGAGTCTGGCCGAGGAAGGCGTGTTA GCGGAGGATGGCGTCGGACCGAACCCGACGGAAGCCGGGCACATGCTTCA GGCGCTCGCTGGCCTATCCACAACGCTGCGGCGACTGAGTCGTGCGGAGG ACAACATAGAAGCCCCTGACAACCCTGACCCCGTACGTACTGCAGAGGAG ATGGGAGGCGAGGGAGGACAGGGCGATACCCCTCCCGCGTGTGAACGCTG CGTAGTTCTCTCTGAGAGCTTGAAAAGCTTGCGCGAGCGGGCCCGGGCGC AGGAGCGTCTCCTGGAACATTCTGAGAAACTTCTTACGGTGGCCACGTCG ACAGCGGCGCCATTTGACACCCCTGTACGCTCAGCAGGGCAACGAGATGA GTCGCGTCCGACCGCAGACGCTGGTCGCAACGGCCCGATAGCATTATGCC CGGGAGCATCAGCAGACCCAGCAACCTCGGTCGGCGTCGCAGCAGATGTT GCACCCATAGGCCAGGTAGAGCCTGCCATCAGGCCCGCGGGGAACGAAGA CGTTCCGCGGGACAAACAACAGCCCGAGGCGGGCAGTGAATACCACGCAT CAGCAGCAAGGGCGGGAGACGAGCACGGGGGGGCACGCGGAGCGGACGAA GAAAACGAGAAACTTCTCGCCGCTGCTGAGGAGGTATGGAGAGTGTCGGA GATGGCGCGGAGTGCGTTGCAGGGGGAGCTAGAGAGGAAGGACGAAGCTC TGTCCGCTGCGACCAAGACGGCGAGGGAGTCCACGGAAGCGCTGTCGAAA CAGAGGCAAGAAGTGGCTCGGTTGAACGACTCCCTGCGGAACCAGGAGAT GGAGACCGAGAAGTGGAAGGCAGACGCTGAGAGATCCATCGCCAAGGCCA AGGACACTCGACGAGTGATGGAGGGCGCCAAGGTTGCTGCGGCTGATGTC TTGCGAAGGTCGGACAGGGAGAGGAAAGCGCTCATGGGTGAAGTGGACAC CCTCAACGAGAAGATCTCAGCCCTTCGGAGTCGCCTGGGGGGCGTACAGA CGAGGCGGCACGCGGAATGCGAGCTGGCAGCGAAGAAAACGGAG back to top
|