mRNA_Ecto-sp13_S_contig615.16843.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig615.16843.1
Unique NamemRNA_Ecto-sp13_S_contig615.16843.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig615.16843.1 vs. uniprot
Match: A0A6H5JV08_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV08_9PHAE)

HSP 1 Score: 1085 bits (2806), Expect = 0.000e+0
Identity = 711/809 (87.89%), Postives = 732/809 (90.48%), Query Frame = 1
Query:    1 MVPPIAIESEEHLQRLVQENEKLIAGRFPVGEGDDLTTEEAFEQLPAAAEGGLAQLCRIDPGSIPAANLLPDGWETSEGDQQEPCWFFYSAGEMVYAAQDSATPGPKLGRLAALLERSPDTLHQLARQDQVLRRQRRGQXXXXXXXXXXXXXXXXXXP-VVAAALPQERGRHGASRGEQLLGVTPGGADRGGGGPASGPGPANLLFVAGDRSQASLGRGCGFGVGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYKLWGCFDPLPLMREFLKGGAGTSEELLQEIKDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFVQANPNALPYGFVPEIASLKHAAAAGSVAAKPGGSQAEANPAAVPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVRVKEELPATEVEDEQDLQAFVATAGSERLVLVDFGAEWCKNCKAILPLVRDLPQRFDGTVAVATADVDKAVELADEREVTTIPHFILLKHGVQVDTYTGSSETDLLRKLSQHLPNVGTPATEPSPAGSGSAXXXXSGATIRSGPGEHAKSVNGEDVPGENSAGLKAAEALIDAFDGNVDVARLLCDIRQHAAEAYGGTSFNPSRRRLPXXXXLSPRAPGETPVQKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGEKPGTXXXXXXXXXXXXXXXXXXXXXXVSATRKSRQEVEAEATKLGASGG 2424
            M PPIAIESEEHLQRLVQEN+KLIAGRFPVGE DD TTEEAFEQLPAAAEGGLA LCRIDPGSIPAANLLPDGWETSEGD QEPCWFFYSAG+MVYAAQDSATPGPKLGRLAALLERSPDTLHQLARQDQVLRRQ    XXXXXXXXXXXXXXXXXX  VVAA LPQERGRHGA+RGEQLLGVTP GA+R GG PASGPGPA L+FVAGDRSQA L       VGKS+TCLGLLG+LLRR+DLCSSDLAYIKPATQCEK Q VTDWCEANGVACRGIGPVVFYK           REFLKGGAGTSEELLQEI+DAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRIST GYYSLERCREAVTSYF QANPNALPYGFVPEIASLKHA+AAGSVAAKPG SQAEAN  AV P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT RVKE+LPATEVEDEQDLQA++AT GSERLVLVDFGAEWCKNCKAILPLVR LP+RFDG VAVATADVDKA ELADER+VTTIPHF+LLK+GVQVDTYTGSSETDLL KL+QHLP+VGTPATEPSPAGSG A    SGA IRSGPGEH K VNGED+PGE SA LKAAEALIDAFDGNVDVARLL DIRQHAAEA G TS NPSRR   XXXX  PRAPGETP+Q TKXXXXXXXXXXXXXXXXXXXXXXXXXXX    GRRGEK   XXXXXXXXXXXXXXXXXXXXXXVSATRKSRQEVEAEATKLGASGG
Sbjct:    1 MAPPIAIESEEHLQRLVQENDKLIAGRFPVGEDDDPTTEEAFEQLPAAAEGGLALLCRIDPGSIPAANLLPDGWETSEGDHQEPCWFFYSAGKMVYAAQDSATPGPKLGRLAALLERSPDTLHQLARQDQVLRRQXXXXXXXXXXXXXXXXXXXXXXXAVVAAPLPQERGRHGAARGEQLLGVTPEGAEREGGVPASGPGPAVLVFVAGDRSQAML-------VGKSTTCLGLLGSLLRRKDLCSSDLAYIKPATQCEKLQPVTDWCEANGVACRGIGPVVFYK--------GFTREFLKGGAGTSEELLQEIRDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTTGYYSLERCREAVTSYFAQANPNALPYGFVPEIASLKHASAAGSVAAKPGVSQAEANSTAVRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARVKEKLPATEVEDEQDLQAYLATTGSERLVLVDFGAEWCKNCKAILPLVRSLPERFDGAVAVATADVDKAAELADERKVTTIPHFVLLKNGVQVDTYTGSSETDLLSKLAQHLPDVGTPATEPSPAGSGPAGTGSSGAMIRSGPGEHVKGVNGEDIPGEKSAALKAAEALIDAFDGNVDVARLLRDIRQHAAEACGDTSSNPSRRLXXXXXXXLPRAPGETPIQTTKXXXXXXXXXXXXXXXXXXXXXXXXXXXVED-GRRGEKQ--XXXXXXXXXXXXXXXXXXXXXXVSATRKSRQEVEAEATKLGASGG 791          
BLAST of mRNA_Ecto-sp13_S_contig615.16843.1 vs. uniprot
Match: D7FR90_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR90_ECTSI)

HSP 1 Score: 1075 bits (2781), Expect = 0.000e+0
Identity = 662/808 (81.93%), Postives = 680/808 (84.16%), Query Frame = 1
Query:    1 MVPPIAIESEEHLQRLVQENEKLIAGRFPVGEGDDLTTEEAFEQLPAAAEGGLAQLCRIDPGSIPAANLLPDGWETSEGDQQEPCWFFYSAGEMVYAAQDSATPGPKLGRLAALLERSPDTLHQLARQDQVLRRQRRGQXXXXXXXXXXXXXXXXXXPVVAAALPQERGRHGASRGEQLLGVTPGGADRGGGGPASGPGPANLLFVAGDRSQASLGRGCGFGVGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYKLWGCFDPLPLMREFLKGGAGTSEELLQEIKDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFVQANPNALPYGFVPEIASLKHAAAAGSVAAKPGGSQAEANPAAVPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVRVKEELPATEVEDEQDLQAFVATAGSERLVLVDFGAEWCKNCKAILPLVRDLPQRFDGTVAVATADVDKAVELADEREVTTIPHFILLKHGVQVDTYTGSSETDLLRKLSQHLPNVGTPATEPSPAGSGSAXXXXSGATIRSGPGEHAKSVNGEDVPGENSAGLKAAEALIDAFDGNVDVARLLCDIRQHAAEAYGGTSFNPSRRRLPXXXXLSPRAPGETPVQKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGEKPGTXXXXXXXXXXXXXXXXXXXXXXVSATRKSRQEVEAEATKLGASGG 2424
            M PPIAIESEEHLQRLVQEN+KLIAG  P GE  + T EEAFEQLPA AEGGLA LCRIDPG IPAANLLPDGWETSEGDQQEPCWFFYSAG+MVYAAQDSATPGPKLGRLAALLERSPDTLHQLARQDQVLRRQRRGQ                   VVAAA PQE GRHGA+RGEQLLGVT GGA R  G PASGPGPA L+FVAGDRSQ          VGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYK           R+FLKGGAGTSEELLQEI+DAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYF QANPNALPYGFVPEIASLKHAA  GSVAAKPG SQAEAN  AVPPAXXXXXXXXXXXXXXXXX                      VKE+LPATEVEDEQDLQAFVATAGSERLVLVDFGAEWCKNCKAILPLVR+LP+RFDGTVAVATADVDKA ELADEREVTTIPHF+LLK+GVQVDTYTGSSETDLL KL+QHLPNVG+P+TEPSPAGSGSAXXX SGA IRSGPGEHAK VNGEDVPG+N A LKAAEALIDAFDGNVDVARLL DIRQ+AAEAYGGTS  PSR    XXXXL PRAPGE P+QKTK               XXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXVSATRKSRQEVEAEA KLGASGG
Sbjct:    1 MAPPIAIESEEHLQRLVQENDKLIAGWIPAGEDGEPTAEEAFEQLPADAEGGLALLCRIDPGIIPAANLLPDGWETSEGDQQEPCWFFYSAGKMVYAAQDSATPGPKLGRLAALLERSPDTLHQLARQDQVLRRQRRGQQASTATAAGADQGHV----VVAAAPPQEPGRHGAARGEQLLGVTQGGAARERGVPASGPGPAVLVFVAGDRSQ----------VGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYK--------GFTRQFLKGGAGTSEELLQEIRDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFAQANPNALPYGFVPEIASLKHAAETGSVAAKPGVSQAEANSTAVPPAXXXXXXXXXXXXXXXXXPGSGMVTGLSDSPTRKGPEAALVKEKLPATEVEDEQDLQAFVATAGSERLVLVDFGAEWCKNCKAILPLVRNLPERFDGTVAVATADVDKAAELADEREVTTIPHFLLLKNGVQVDTYTGSSETDLLSKLAQHLPNVGSPSTEPSPAGSGSAXXXSSGAMIRSGPGEHAKGVNGEDVPGKNFAALKAAEALIDAFDGNVDVARLLRDIRQYAAEAYGGTSSKPSRXXXXXXXXLLPRAPGEAPIQKTKAAADSSSGQPWAVSAXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXVSATRKSRQEVEAEAAKLGASGG 784          
BLAST of mRNA_Ecto-sp13_S_contig615.16843.1 vs. uniprot
Match: A0A836CIE2_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE2_9STRA)

HSP 1 Score: 266 bits (680), Expect = 7.840e-78
Identity = 141/227 (62.11%), Postives = 166/227 (73.13%), Query Frame = 1
Query:  598 PANLLFVAGDRSQASLGRGCGFGVGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYKLWGCFDPLPLMREFLKGGAGTSEELLQEIKDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFVQANPNALPYGFVPE 1278
            PA  +F+ GDRSQ          VGKS+ CLG+LG+LL       SDLAYIKP TQCE+PQL++ WC A GVACRGIGPVVFY            R FLKG AGTSE+LL + K AV+EIS GKK VVVDGVGYPAVGSICG+SN   AAAL  PVLLVG+SGVGDAVDS+NLNA FF++ GV VLGGVFNR+++ G+YSL  C+EAVT+YF +     +PYGFVP+
Sbjct:   13 PALKIFIGGDRSQ----------VGKSTVCLGILGSLLEL-GYSPSDLAYIKPVTQCEQPQLISKWCAAKGVACRGIGPVVFYA--------GFTRAFLKGEAGTSEQLLADAKAAVDEISKGKKFVVVDGVGYPAVGSICGISNAHTAAALHTPVLLVGRSGVGDAVDSFNLNATFFKSHGVEVLGGVFNRLASGGFYSLANCQEAVTNYFARVGRQ-MPYGFVPD 219          
BLAST of mRNA_Ecto-sp13_S_contig615.16843.1 vs. uniprot
Match: A0A3M6VK01_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VK01_9STRA)

HSP 1 Score: 260 bits (664), Expect = 2.030e-73
Identity = 136/236 (57.63%), Postives = 168/236 (71.19%), Query Frame = 1
Query:  595 GPANLLFVAGDRSQASLGRGCGFGVGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYKLWGCFDPLPLMREFLKGGAGTSEELLQEIKDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFVQANPNALPYGFVPEIASLKHAA 1302
            GP   +FV+GDR+Q          VGKS+ CLGL+GALLR     +SD+AYIKPATQCEKPQLVT +C   G+ C  +GP++FY+           REFLKG   TS ELL++ K  VEE+  GKKVVVVDGVGYPAVGSICGVSN D+A  L+APV+LVGK GVGDAVDS++LNA FFE+ GV+VLGG+FNR+   GYYSLE C++ VT+YF Q  P    YGF+P++    H+A
Sbjct:  118 GPPLRIFVSGDRAQ----------VGKSTVCLGLVGALLR-SGYAASDIAYIKPATQCEKPQLVTKFCRQQGITCCDVGPILFYR--------GFTREFLKGETETSAELLEKAKMKVEEVGRGKKVVVVDGVGYPAVGSICGVSNADIAKKLEAPVVLVGKKGVGDAVDSFSLNATFFESHGVKVLGGIFNRLPNDGYYSLEHCKDNVTAYFKQFQPEKSVYGFLPDLTDGGHSA 334          
BLAST of mRNA_Ecto-sp13_S_contig615.16843.1 vs. uniprot
Match: A0A329RVX4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RVX4_9STRA)

HSP 1 Score: 262 bits (669), Expect = 2.500e-73
Identity = 138/235 (58.72%), Postives = 166/235 (70.64%), Query Frame = 1
Query:  598 PANLLFVAGDRSQASLGRGCGFGVGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYKLWGCFDPLPLMREFLKGGAGTSEELLQEIKDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFVQANPNALPYGFVPEIASLKHAA 1302
            P   LF++GDR+Q          VGKS+ CLGL+GALLR     +SD+AYIKPATQCEKPQLVT +C   G+ C  +GP++FYK           REFLKG   TS +LL++ K  VEE+  GKKVVVVDGVGYPAVGSICGVSN  VA  L+ PV+LVGK GVGDAVDS+NLNA FFE+ GV+VLGG+FNR+   G+YSLE CRE VT+YF Q  P    YGF+PE+A   H+A
Sbjct:  132 PPLRLFISGDRAQ----------VGKSTVCLGLVGALLR-SGYAASDIAYIKPATQCEKPQLVTKFCRQQGITCCEVGPILFYK--------GFTREFLKGETDTSAQLLEKAKQKVEEVGRGKKVVVVDGVGYPAVGSICGVSNAHVAKKLETPVVLVGKKGVGDAVDSFNLNATFFESHGVKVLGGIFNRLPEGGFYSLEHCRENVTAYFEQFQPEKRVYGFLPELADGGHSA 347          
BLAST of mRNA_Ecto-sp13_S_contig615.16843.1 vs. uniprot
Match: D0MTT2_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MTT2_PHYIT)

HSP 1 Score: 259 bits (663), Expect = 7.620e-73
Identity = 139/241 (57.68%), Postives = 167/241 (69.29%), Query Frame = 1
Query:  580 PASGPGPANLLFVAGDRSQASLGRGCGFGVGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYKLWGCFDPLPLMREFLKGGAGTSEELLQEIKDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFVQANPNALPYGFVPEIASLKHAA 1302
            PA+   P   LF++GDR+Q          VGKS+ CLGL+GALLR     +SD+AYIKPATQCEKPQLVT +C   G+ C  +GP++FYK           REFLKG   TS +LL++ K  VEE+  GKKVVVVDGVGYPAVGSICGVSN  VA  LK PV+LVGK GVGDAVDS+NLNA FFE+ GV+VLGG+FNR+   G+YSLE CRE VT+YF Q       YGF+PE+    H+A
Sbjct:  122 PATPEAPPLRLFISGDRAQ----------VGKSTVCLGLVGALLR-SGYAASDIAYIKPATQCEKPQLVTKFCRQQGITCCEVGPILFYK--------GFTREFLKGETETSAQLLEKAKQKVEEVGKGKKVVVVDGVGYPAVGSICGVSNAHVAKKLKTPVVLVGKKGVGDAVDSFNLNATFFESHGVKVLGGIFNRLPEDGFYSLEHCRENVTAYFEQFQSEKRVYGFLPELTDGGHSA 343          
BLAST of mRNA_Ecto-sp13_S_contig615.16843.1 vs. uniprot
Match: A0A2P4X707_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X707_9STRA)

HSP 1 Score: 258 bits (659), Expect = 3.220e-72
Identity = 139/241 (57.68%), Postives = 167/241 (69.29%), Query Frame = 1
Query:  580 PASGPGPANLLFVAGDRSQASLGRGCGFGVGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYKLWGCFDPLPLMREFLKGGAGTSEELLQEIKDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFVQANPNALPYGFVPEIASLKHAA 1302
            PA+   P   LF++GDR+Q          VGKS+ CLGL+GALLR      SD+AYIKPATQCEKPQLVT +C   G+ C  +GP++FYK           REFLKG   TSE+LL++ K  VEE+  GKKVVVVDGVGYPAVGSICGVSN  VA  L  PV+LVGK GVGDAVDS+NLNA FFE+ GV+VLGG+FNR+   G+YSLE C+E VT+YF Q  P    YGF+PE+    H+A
Sbjct:  115 PATSEVPPLRLFISGDRAQ----------VGKSTVCLGLVGALLRSR-YAPSDIAYIKPATQCEKPQLVTKFCRQQGITCCEVGPILFYK--------GFTREFLKGETETSEQLLEKAKKKVEEVGRGKKVVVVDGVGYPAVGSICGVSNAHVAKKLGTPVVLVGKKGVGDAVDSFNLNATFFESYGVKVLGGIFNRLPDDGFYSLEHCKENVTAYFEQFQPKKHVYGFLPELTDGGHSA 336          
BLAST of mRNA_Ecto-sp13_S_contig615.16843.1 vs. uniprot
Match: W2RIT5_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2RIT5_PHYPN)

HSP 1 Score: 258 bits (658), Expect = 1.060e-71
Identity = 140/256 (54.69%), Postives = 174/256 (67.97%), Query Frame = 1
Query:  580 PASGPGPANLLFVAGDRSQASLGRGCGFGVGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYKLWGCFDPLPLMREFLKGGAGTSEELLQEIKDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFVQANPNALPYGFVPEIASLKHAAAAGSVAAKPGGSQAE 1347
            PA+   P   LF++GDR+Q          VGKS+ CLGL+GALLR     + D+AYIKPATQCEKPQLVT +C   G+ C  +GP++FYK           REFLKG   TS +LL++ K  V+E+  GKKVVVVDGVGYPAVGSICGVSN  VA  L+APV+LVGK GVGDAVDS+NLNA FFE+ GV+VLGG+FNR+   G+YSLE C+E VT+YF Q  P    YGF+PE+    H+A     A++ G  + E
Sbjct:  156 PATQETPPLRLFISGDRAQ----------VGKSTVCLGLVGALLR-SGYAAGDIAYIKPATQCEKPQLVTKFCRQQGITCCEVGPILFYK--------GFTREFLKGETDTSAQLLEKAKQKVDEVGRGKKVVVVDGVGYPAVGSICGVSNAHVAKKLEAPVVLVGKKGVGDAVDSFNLNATFFESYGVKVLGGIFNRLPEDGFYSLEHCKENVTAYFEQFQPEKHVYGFLPELTDGGHSALIAEKASEEGQKEPE 392          
BLAST of mRNA_Ecto-sp13_S_contig615.16843.1 vs. uniprot
Match: G4Z3Y9_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z3Y9_PHYSP)

HSP 1 Score: 257 bits (657), Expect = 1.220e-71
Identity = 139/250 (55.60%), Postives = 177/250 (70.80%), Query Frame = 1
Query:  610 LFVAGDRSQASLGRGCGFGVGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYKLWGCFDPLPLMREFLKGGAGTSEELLQEIKDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFVQANPNALPYGFVPEIASLKHAAAAGSVAAKPGGSQAEANPA 1359
            LFV+GDR+Q          VGKS+TCLGL+GALLR E   + DLAYIKPATQCEKPQLVT +C   GVAC  +GP++FYK           REFL+G   ++ +LL++ +  VEE+ +GKKVV+VDGVGYPAVGSICGVSN  VA  L+ PV+LVGK GVGDAVDS+NLNA FFE+ GV+VLGG+FNR+   G+YSLE C+E VT+YF Q  P+   YGF+PE+    H+A    + A+ G  + ++ PA
Sbjct:  137 LFVSGDRAQ----------VGKSTTCLGLVGALLR-EGYKAEDLAYIKPATQCEKPQLVTKFCRQQGVACCEVGPILFYK--------GFTREFLRGETESAPQLLEKARKKVEEVGTGKKVVIVDGVGYPAVGSICGVSNAHVAKKLEVPVVLVGKKGVGDAVDSFNLNATFFESHGVKVLGGIFNRLPEDGFYSLEHCKENVTAYFEQFQPDKHVYGFLPELTDGGHSA----LIAEKGSEEGQSEPA 363          
BLAST of mRNA_Ecto-sp13_S_contig615.16843.1 vs. uniprot
Match: A0A662XI14_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XI14_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.880e-71
Identity = 133/225 (59.11%), Postives = 163/225 (72.44%), Query Frame = 1
Query:  610 LFVAGDRSQASLGRGCGFGVGKSSTCLGLLGALLRREDLCSSDLAYIKPATQCEKPQLVTDWCEANGVACRGIGPVVFYKLWGCFDPLPLMREFLKGGAGTSEELLQEIKDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFVQANPNALPYGFVPEIA 1284
            LFV+GDR+Q          VGKS+ CLGL+G+LLR     +SD+AYIKPATQCEKPQLV  +C   G++C  +GP++FYK           REFLKG   +S +LL   K  V+E+  GKKVVVVDGVGYPAVGSICGVSN  VA A++APV+LVGK GVGDAVDS+NLNA FFE+ GV+VLGG+FNR+   G+YSLE CRE VT+YF Q  P+   YGF+PE+A
Sbjct:  164 LFVSGDRAQ----------VGKSTVCLGLVGSLLR-SGYAASDIAYIKPATQCEKPQLVAKYCRQQGISCCDVGPILFYK--------GFTREFLKGSTESSAQLLARAKAKVDEVGRGKKVVVVDGVGYPAVGSICGVSNASVAKAVQAPVVLVGKKGVGDAVDSFNLNASFFESHGVKVLGGIFNRLPADGFYSLEHCRENVTAYFEQFQPDKRVYGFLPELA 369          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig615.16843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV08_9PHAE0.000e+087.89Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
D7FR90_ECTSI0.000e+081.93Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A836CIE2_9STRA7.840e-7862.11AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A3M6VK01_9STRA2.030e-7357.63Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A329RVX4_9STRA2.500e-7358.72Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
D0MTT2_PHYIT7.620e-7357.68Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A2P4X707_9STRA3.220e-7257.68Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
W2RIT5_PHYPN1.060e-7154.69Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
G4Z3Y9_PHYSP1.220e-7155.60Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A662XI14_9STRA1.880e-7159.11Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig615contigEcto-sp13_S_contig615:15632..23342 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1083.6
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FR90
Model size3145
KEGG koko:K03671
KEGG Pathwayko04621,ko05418,map04621,map05418
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.cell redox homeostasis
EggNOG OGsCOG0526@1,KOG0907@2759
Cds size2427
COG Functional cat.CO
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig615.16843.1prot_Ecto-sp13_S_contig615.16843.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig615 15632..22611 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463857.3453948-CDS-Ecto-sp13_S_contig615:15631..159131681463857.3453948-CDS-Ecto-sp13_S_contig615:15631..15913Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig615 15632..15913 +
1681463857.3563437-CDS-Ecto-sp13_S_contig615:16969..173531681463857.3563437-CDS-Ecto-sp13_S_contig615:16969..17353Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig615 16970..17353 +
1681463857.3673337-CDS-Ecto-sp13_S_contig615:17631..178141681463857.3673337-CDS-Ecto-sp13_S_contig615:17631..17814Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig615 17632..17814 +
1681463857.382939-CDS-Ecto-sp13_S_contig615:18180..183031681463857.382939-CDS-Ecto-sp13_S_contig615:18180..18303Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig615 18181..18303 +
1681463857.3938248-CDS-Ecto-sp13_S_contig615:18636..188791681463857.3938248-CDS-Ecto-sp13_S_contig615:18636..18879Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig615 18637..18879 +
1681463857.4035385-CDS-Ecto-sp13_S_contig615:19346..197571681463857.4035385-CDS-Ecto-sp13_S_contig615:19346..19757Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig615 19347..19757 +
1681463857.4146252-CDS-Ecto-sp13_S_contig615:21079..212201681463857.4146252-CDS-Ecto-sp13_S_contig615:21079..21220Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig615 21080..21220 +
1681463857.427442-CDS-Ecto-sp13_S_contig615:21951..226111681463857.427442-CDS-Ecto-sp13_S_contig615:21951..22611Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig615 21952..22611 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463857.4423485-UTR-Ecto-sp13_S_contig615:22611..230151681463857.4423485-UTR-Ecto-sp13_S_contig615:22611..23015Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig615 22612..23015 +
1681463857.453795-UTR-Ecto-sp13_S_contig615:23028..233421681463857.453795-UTR-Ecto-sp13_S_contig615:23028..23342Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig615 23029..23342 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig615.16843.1

>prot_Ecto-sp13_S_contig615.16843.1 ID=prot_Ecto-sp13_S_contig615.16843.1|Name=mRNA_Ecto-sp13_S_contig615.16843.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=809bp
MVPPIAIESEEHLQRLVQENEKLIAGRFPVGEGDDLTTEEAFEQLPAAAE
GGLAQLCRIDPGSIPAANLLPDGWETSEGDQQEPCWFFYSAGEMVYAAQD
SATPGPKLGRLAALLERSPDTLHQLARQDQVLRRQRRGQRASAAAAAAAD
AGADEDDPVVAAALPQERGRHGASRGEQLLGVTPGGADRGGGGPASGPGP
ANLLFVAGDRSQASLGRGCGFGVGKSSTCLGLLGALLRREDLCSSDLAYI
KPATQCEKPQLVTDWCEANGVACRGIGPVVFYKLWGCFDPLPLMREFLKG
GAGTSEELLQEIKDAVEEISSGKKVVVVDGVGYPAVGSICGVSNGDVAAA
LKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSL
ERCREAVTSYFVQANPNALPYGFVPEIASLKHAAAAGSVAAKPGGSQAEA
NPAAVPPAPAGASAQAEVAQGEGGGPGSGTVTDLSDSPREKESETVRVKE
ELPATEVEDEQDLQAFVATAGSERLVLVDFGAEWCKNCKAILPLVRDLPQ
RFDGTVAVATADVDKAVELADEREVTTIPHFILLKHGVQVDTYTGSSETD
LLRKLSQHLPNVGTPATEPSPAGSGSAGAGSSGATIRSGPGEHAKSVNGE
DVPGENSAGLKAAEALIDAFDGNVDVARLLCDIRQHAAEAYGGTSFNPSR
RRLPPPPPLSPRAPGETPVQKTKKAAAGSSSGQPWAVSAAAAVVEQQQGA
TVEDGRRGEKPGTSGSGSSVTTSKPAAAAAAAAAAVSATRKSRQEVEAEA
TKLGASGG*
back to top

mRNA from alignment at Ecto-sp13_S_contig615:15632..23342+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig615.16843.1 ID=mRNA_Ecto-sp13_S_contig615.16843.1|Name=mRNA_Ecto-sp13_S_contig615.16843.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7711bp|location=Sequence derived from alignment at Ecto-sp13_S_contig615:15632..23342+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTACCGCCGATTGCAATAGAGAGCGAGGAGCACCTGCAGCGCCTCGT GCAAGAGAATGAAAAGTTGATTGCTGGGAGGTTTCCTGTCGGGGAGGGTG ATGATCTCACCACCGAGGAGGCCTTTGAGCAGCTGCCAGCTGCTGCTGAA GGAGGTCTCGCCCAGTTGTGCCGCATCGATCCCGGAAGCATCCCTGCTGC TAATCTGCTGCCCGACGGGTGGGAGACAAGCGAGGGAGACCAGCAGGAAC CATGCTGGTTTTTCTACAGCGCTGGCGAGATGGTGCGTGCTAATGCGTAT TGTACGGGATGGCGATATCGCGGTTTATCTGTTGCTGTTCCACAAGTGCA AGTTCAACTCCGCCTTACCGTGTCGTCGGCGCTTGCATTGCGGGTGGTAT CCGTTGGCGTGGGCACAAACTTCCTTTGGTGCCGACCCCGCATGATTCAG GACCGTCCTTGAAGTGTGACTGTGGATAAAGCCGAGTACTAAGTACGATC GACCCTTTCATGCCGGCTACCAACACCCCGCCTGCCGAAGTGGCTGTTGC ACTCCCTTATAGTTGTTGCACAAAGCCGGAGCGGCGGGCTCAGGCGGGGA TGCTTTGAGAATTGTCAAAAGCAGCCGAGAGATATACGGGTATTGAACCC GTGCATATAAGCACTCCTCTTTTCACCCCCGAAGGGACCCTGGCTTTGTC ATGCATGCATTGCCTCTTCGACAGCAGTAGAGGCTAAAGTCTACACGCCA TGGAATTGGGTCCGCGTCTCGTGCCGCGTTTCGTACTTTGCACCTCCCCC TAGTTACCGCAGTCTGGCTTTCACAGCTCGATTGCTCCACAGCCAAGAAG GTTCGCAAACCCATCGATGCGTGCCAGAAGCTCTCCACGAGATTGTCCAA TCTTGGCGTTGGCATCCCCAGTAGGTCACGCAGGTTTTTTCAAGTAAGAA AATATACTGGATATAGTATAGAAATGGCTAGATTGAGGTTTAGGGTCTGA GTTCCTGGACGTACCTCGGACCGGTCGCTCCTATGATCTCGGTGGCCCCC TCGAGAATCATGCCACCAGCCAGTCGTAGTGCGGTATCGGCCACATTTCA ACGGCATCTGAACACGCGGCACGCAAGCTGAGAATTGTAGAACCTGGCCG CCGAAGGAAAAGAAGAAAATTACACGCAGGTCTAGGTGGATGGCGACACT GAATACGGCGTTTCGCGCGATATTATAGAGCTAAGACGACCCCAATGGCG ACCACGCCCAGAAGAAGGATTCCCCCGCGTGACCCTTTGACCAAGATTTC TCATCTAGCAGCTTGCCCCCGACCAACCGCACAACCAGGTGTACGCGGCA CAAGACTCCGCCACGCCGGGCCCGAAGCTCGGCCGCCTCGCCGCCCTCCT CGAGCGTAGCCCGGACACGCTCCACCAGCTCGCTCGGCAAGACCAAGTCC TTCGCCGACAAAGGCGGGGACAACGAGCTTCCGCCGCCGCCGCCGCCGCC GCTGACGCCGGTGCTGACGAAGATGATCCCGTCGTCGCTGCTGCGCTACC CCAAGAACGGGGGCGACACGGCGCCTCGCGCGGAGAACAACTTCTTGGGG TTACACCGGGAGGGGCGGACCGGGGGGGAGGAGGGCCTGCTTCCGGGCCG GGGCCCGCAAACTTGCTCTTCGTCGCCGGGGATAGGTCTCAGGCAAGTCT TGGGCGAGGATGTGGATTCGGAGTTACTTACTTAGATTGTAACGGCATTG TGCTGGTCATACGGATACCTTCCCGAGCGCTGTGGGTGACGAGAAATCGT CGCGGGGGTGGAGGTAGCATTGGTTTCCCTTCTTCTTTCGTGAATGGTTC CCCCGCAGTTCTAGGCGTGCGGACGCTCCTCCAATGTATTGTCGTTGCGA AGGCAGCAGTCGGCCCAAAAATCACGCAGATTAATGTGTTGACCCATGCG CTCCCTTTCCCAAACGTTCTGAAATCGCGCACGTGCGCAACCATGAAAAG GTGGGCAAAAGCAGCACGTGCCTCGGCCTCCTGGGAGCTTTGTTAAGACG AGAAGACTTGTGCTCGAGCGACCTGGCCTACATCAAGCCGGCCACGCAGT GTGAAAAGCCGCAGCTGGTGACCGACTGGTGCGAGGCGAATGGCGTCGCC TGTCGAGGCATAGGTCCGGTGGTTTTCTACAAGGTGCGGAACTCCACCCC CCCGAAGCGGAAATAAAAAGGAGACAGCGAGCACAGTATCGCCCTCGTCG TCTTTCTAAAGAGAAAAACGTAGAGCTGGATGTGGATGAAAGCATTGGTG GCGGGATCGGAACATGTCTCACGTGGCGTTCTTAACATGCCGGGAGGGAT CCGTCCCTCGAGCGGGGGGAAAGGCCGGGGATGGCTACAAGTAACGTCGC CGTGCGGTAACTTTTTGTTTATTCAGTTGGGAAAATCGATGCCAGGGCAG CTCGCCAGAGTTTCCGCCGGCTTTTGTCGTCGGACCCCGCTAGAGTACAA GGTGTTATAGCCGGTGTTCTTCCGAGGGATGGATGCAATGGTTAGGAAGC TTTGGGGCTGCTTTGACCCGCTTCCACTCATGAGGGAGTTCCTCAAAGGA GGCGCGGGCACGTCGGAGGAACTGCTGCAGGAGATCAAGGATGCTGTCGA AGAAATTTCCTCCGGAAAAAAGGTGGCGTTGCTGGGGGTGAAGTATGTCG CTATTGACGTTTGACGTTGCGGCTTTTTCTGACGTTGTCAAAACATCCCC CGACAACATCGGGCAGGGGGGGTTCAGGAAAACACCGCTTCGTTCAGCTC GTGAAGTTCTTCAACACAATGCCGAGAAGTGTTGTTCTGCGAACTTTAGC CAAGTCGCGGGATCGATGACGGTCACAACCATAAAGCGTGGTGGGAAACC CGACATTAGGGTGGATATGTGAAACTACCGTAGTAATTTGCACGATGGAA GCATTTCGTTTCGACTGTTGCCCCGCACCCTGGGACCCCGCGCCCGACCT CGCAGGTCGTTGTGGTCGACGGCGTGGGCTACCCCGCCGTGGGATCGATC TGCGGGGTGTCCAACGGGGACGTCGCCGCCGCTCTCAAGGCGCCCGTCCT TCTGGTTGGAAAGTCGGGCGTCGGGGACGCCGTGGACAGTTACAACCTCA ACGCCTGTTTTTTCGAGGCCCGCGGTGTGAGGGTGCTTGGCGGCGTGTTC AACAGGATCTCCACCGCCGGATACTACTCCCTGGAGCGCTGCCGCGAGGT TTGAACATAGGGAAGCTACAAGTCAGTTTGTTTTCCGACGACGCTTCGTC ACGCGTGGTTTGCTGCAGTTTGTTTCCAGAGACAGCATGGCTTGTTGCGT CGTGGTGCTTGGACGTGTGAAGGGTGCGGTGCCGGTGTTGGCCGACGTAC TTAGTGGGGCATCTATTGTCGCTACTTGCATCTCACCCTACCTGCCGTAA GGTCTGCATGTTCTCTTCTCTTCTGCTCTCGCGTTCCGCGCTTGGTCTAC GGTATGACTTTTCGAGAGCGCCCTTTGGTGGACTGCCCTTTTTTTAGTGC TCCGCATGTTTCCCTCGATTGTGCATGACGATCCGCGGTAGTCGCATCTA CCCTTCGGTGCTGTGTCACGGCACTCCTTCAAGCGCCGACAGTAATTTCT TGTGCAGATTCTTCGAGAGACTTCCTAACCTTGTCCCACGGTCTGTTTTG TCTTTTTCCCCTTAGGCGGTGACTTCGTACTTTGTTCAGGCGAACCCAAA CGCCTTGCCCTACGGCTTCGTCCCCGAGATAGCCTCCTTGAAACACGCCG CCGCGGCGGGCAGCGTTGCGGCAAAACCCGGGGGTTCCCAAGCAGAGGCC AACCCAGCGGCAGTTCCTCCGGCACCCGCGGGGGCGTCGGCGCAAGCGGA GGTTGCTCAGGGTGAAGGTGGTGGGCCTGGGAGTGGCACTGTGACTGATC TGTCGGATTCGCCTAGAGAGAAGGAGTCAGAAACTGTGCGAGTGAAAGAG GAGCTTCCGGCGACGGAGGTCGAGGACGAGCAGGACCTGCAAGCTTTCGT GGCCACCGCCGGGAGCGAGCGGTTGGTGTTGGTTGACTTCGGGGCGGAGT GGTGCAAGAACTGCAAGGCGATATTGGTGAGTTTTGGACAAGCGAGAGCT AGACATGATGGTTTGTTCTATTTGTGCTAGTGAGCAGCAGCATTTCATTT TTTTGTGGAACCTCCGGGGTGTTGACGCATGTGGTGGATCGTATTGTTGG CCGTGGTCAATTATGCAGACAGAGCCCGGAGATAGGAGAAGTCAAAATCG GGTCGAGCCTCGATTGCTTGTTCTGGGCAAAAGGCGCAGCCGAAATCGGT CAATTTTTTACAACGGATTTCTTACTCCTTTGGCTGTCGCATCTTGCTGA TTCTCCATTGATGCATTTTTTTGTTTCTGATGGCGAAGAAAACAACACGC CAAATGCCTTCATGCAGCATTGAACCGACAGCTCGGTTTGACGAACATTC GGGGTTTTGGTAGTACAGAAGTACAGCAGCAGTGGGTAGCGCAGCCCGCG GCGCCGCTGGAGCGCGGGGGGCGCCACGAAAGTAATCACTCTCCCCCTAC CAAAAACTTAAATGACATGAGCTAGGTAGGAGGTGGGAGCATGGCAGCAG CAGCAGCAGTGGGCCGTTTCTTTGGACCCGCTCCCCCAGCTTCTACCCCT TGTTTCTTTTGTGTTGGTGTATCGCACGACCAGTTTCTTTTTGTGACGTT TCCTATGTTGTGCTGGAGATTGAGCTGTGCTTCTTAGGCCTTTTACTTAT TTTCCGTAAAAGTTTGACCCTTTCTTTCTTCACATACTTTTTCTTAACTG CGGGCCCCATCTGGGCCTATTCACTCCCATACAGAATATTTTCTTACAAC TAGTATAATAGCGTTTTGGGGTAGCGCCGGCGTCACTCATCCTTCATGGC CAGCGTTTTGTGGTGTTTGGTACGGTCATTTTTGGGAGCGAGGGTTGCGC GACATCCCTGCCTTGCCTTTGCCTGGATGCTCAACCCAAACGAGAGTGTG GTACTGGCCACGTCGCACGTCTCCTTCCTTGAGCACTTGAACACCAACCC TTCCTACACAGCTTTTTGACCCAGATTTCTCCCACATCGATTGTAGAACG TTGAGCCGTTTTTTTGTTTCGGTGTTTTTTTTTCTGAAAGCCTTTAGCGA GGTCGCGAGAGCAACAACATATTGAATTTATTCTTGGACACCTGCCCGCC CCTTGCGCTTATTCCAACCAGTTGAGGGCGCGCCGGAGCTTCTGTGAACA CATTGCCCCGAAATGCAGTATCGCGCTATGATCCCCTTCACTGCTTCCAG GGTGGGCGTTCATGGCTCTCCACACGTTCTACTTCATACCCACCGCTGTC GAGAACATTTTTTTCTGCACTTTCACCTCTTTCGTTGTTTTGTCCCAGCC TCTCGTGCGCGACCTCCCGCAGCGGTTCGATGGGACTGTCGCGGTGGCCA CGGCTGACGTGGATAAGGCGGTGGAACTCGCCGACGAGCGCGAAGTGACC ACCATTCCGCACTTCATCCTCCTCAAACACGGTGTTCAGGTGTGTGCGCA TTGGTTTTGTTATTTTCGCATCGATCTCGCTGAGTGGCTGGGTAACGAAA CACGTCGGTCTTATGTTAGTGGGATACAGCACAATTTGAACGCTTCAGGT TCCGTGGGCTCCGTTCTTGTGATCCATTGAATTATATCTACCTGGCTAAC TGGAACCTTGAAACTTGTCAGTCTACGATTGTGGGTGTGTAACTTTTCGA TTGTTTGTTTGTTTCTGCAACTACTCGCATGATCCGCGCGATGTAGTTGA TTGACGACCACAATAGAAGGCTTTTCAGTTGTGGCGAGACGAATGGAGTC CTACCGTTTCCCAAACAAGACTGGGACGGAAGGGTGAAACCTCCGTATGC CGCGTGATCGAAGAAGGTAGAAAGCCGCCACCAACTCTATCCTCCCGTGG CACCGTTGCCTTGTAGGGAGGTGTTTCTGGTGTCCACCTGTGACTGCCCT GTACCGCTCTTTCTTTGCTGAGTGTGTCCATTTATGTATATTTATTTTTC ATTACTCCGGAGTACGTACGTCTCCAGCGAAAACCAATGAGTCGTTATTT GGTGGGGTCTTCTCATTGAGGTTGTATATCCACCCCAACCCCATTCAGAA TTTTGCCCCAGCCATTGGTTTTCTCTACGTCCGATACCTCGGTTGTACTT GGGCTGACCTCCTCGATCGAAAGAATATCTTAACCAAGATCCTCCGCAAA ATCGATGTGTTGACGCGAAGGTGGACACCTACACCGGCAGTTCGGAAACG GACCTGCTGAGAAAGCTTTCACAGCACCTCCCTAACGTTGGGACCCCGGC AACAGAGCCAAGCCCGGCCGGCAGCGGATCTGCAGGCGCCGGTTCGAGCG GTGCCACGATCCGTAGCGGCCCGGGAGAACACGCCAAGAGCGTGAACGGG GAAGATGTTCCAGGCGAAAACTCCGCCGGCCTCAAGGCAGCGGAGGCGCT CATCGACGCGTTCGACGGTAACGTGGACGTCGCTCGACTCTTGTGCGACA TCCGACAGCACGCCGCCGAAGCTTATGGTGGCACCAGTTTCAACCCCTCT CGGCGGCGGCTGCCACCACCACCACCACTGTCGCCACGAGCTCCGGGAGA AACACCTGTTCAGAAGACGAAGAAGGCCGCGGCTGGTTCGAGTTCCGGAC AGCCGTGGGCAGTGTCCGCCGCTGCTGCTGTTGTCGAGCAGCAGCAGGGT GCAACAGTGGAAGATGGCAGGAGGGGAGAGAAACCGGGGACGAGCGGAAG CGGTTCGTCCGTCACGACATCCAAGCCTGCTGCTGCTGCTGCTGCTGCCG CCGCCGCGGTCTCTGCCACGCGGAAAAGCAGACAAGAAGTGGAAGCAGAA GCCACCAAACTCGGGGCGTCAGGCGGCTGACAGCTTGGGTCGAGGAGGAA GTAGCATGGGTGTGTTCCTCGATAGACAAACGGAAACGACGTTTGGCGCT TTCATTTGCCCTTGTAAGAGGCGCGTTTCACCGTACACCGTATTCCTGTC GACGTTCATGCCCTTGGTACCCTTCCCGGCCGATTTATGAAGATGTTATA GCTTTTCAGCCTACAGGGCATAATGGTTGCTCTGTGTTTGTGGTCAGCCC CCTGAGAGGTTGTGTACGATTGCCGTAATGACGGGCGGCGCGGGAAACCA TCGCGGAAGAGCGAAGTATGTTTCTTCCGGCTGGCGCGGTCGCTCTGACA AGTGCTTTCGACCTGTTTGTTTTTTGATAGCCGTATAAGTATGGTAGACC AGTCGTGTATTCGGGGTCCCTTTGTTTCAGAATGCTGCCATTCACCACCG GGCCAAGCATTCATGCGCGTTTCGAAGAAGAATTAATTGTGCACACGGTT GGGTGATGGATCTGGATTACTCATGACTGGGAGTACAGCAGTAGTTCGGA TTGTCTATATTGGCGCTGTAGGATTTGCTCTCCCGAGGTGGGGGCTCGTT GGTGTAAATGTGTTGAACAGTCGTGCCTTGCCTGCAGGAAGTTATTATCT TTCCTACAGTGCGTAAGCGTGCAGGCAGTCGTGTGCCCTAAAGCCTTGAC AAGCAGTAGAGGAGGAATGATGTCCACGTAGGAGACCAATGGTGGTCAGT GTCAGATTCAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig615:15632..23342+

>mRNA_Ecto-sp13_S_contig615.16843.1 ID=mRNA_Ecto-sp13_S_contig615.16843.1|Name=mRNA_Ecto-sp13_S_contig615.16843.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2427bp|location=Sequence derived from alignment at Ecto-sp13_S_contig615:15632..23342+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTACCGCCGATTGCAATAGAGAGCGAGGAGCACCTGCAGCGCCTCGT
GCAAGAGAATGAAAAGTTGATTGCTGGGAGGTTTCCTGTCGGGGAGGGTG
ATGATCTCACCACCGAGGAGGCCTTTGAGCAGCTGCCAGCTGCTGCTGAA
GGAGGTCTCGCCCAGTTGTGCCGCATCGATCCCGGAAGCATCCCTGCTGC
TAATCTGCTGCCCGACGGGTGGGAGACAAGCGAGGGAGACCAGCAGGAAC
CATGCTGGTTTTTCTACAGCGCTGGCGAGATGGTGTACGCGGCACAAGAC
TCCGCCACGCCGGGCCCGAAGCTCGGCCGCCTCGCCGCCCTCCTCGAGCG
TAGCCCGGACACGCTCCACCAGCTCGCTCGGCAAGACCAAGTCCTTCGCC
GACAAAGGCGGGGACAACGAGCTTCCGCCGCCGCCGCCGCCGCCGCTGAC
GCCGGTGCTGACGAAGATGATCCCGTCGTCGCTGCTGCGCTACCCCAAGA
ACGGGGGCGACACGGCGCCTCGCGCGGAGAACAACTTCTTGGGGTTACAC
CGGGAGGGGCGGACCGGGGGGGAGGAGGGCCTGCTTCCGGGCCGGGGCCC
GCAAACTTGCTCTTCGTCGCCGGGGATAGGTCTCAGGCAAGTCTTGGGCG
AGGATGTGGATTCGGAGTGGGCAAAAGCAGCACGTGCCTCGGCCTCCTGG
GAGCTTTGTTAAGACGAGAAGACTTGTGCTCGAGCGACCTGGCCTACATC
AAGCCGGCCACGCAGTGTGAAAAGCCGCAGCTGGTGACCGACTGGTGCGA
GGCGAATGGCGTCGCCTGTCGAGGCATAGGTCCGGTGGTTTTCTACAAGC
TTTGGGGCTGCTTTGACCCGCTTCCACTCATGAGGGAGTTCCTCAAAGGA
GGCGCGGGCACGTCGGAGGAACTGCTGCAGGAGATCAAGGATGCTGTCGA
AGAAATTTCCTCCGGAAAAAAGGTCGTTGTGGTCGACGGCGTGGGCTACC
CCGCCGTGGGATCGATCTGCGGGGTGTCCAACGGGGACGTCGCCGCCGCT
CTCAAGGCGCCCGTCCTTCTGGTTGGAAAGTCGGGCGTCGGGGACGCCGT
GGACAGTTACAACCTCAACGCCTGTTTTTTCGAGGCCCGCGGTGTGAGGG
TGCTTGGCGGCGTGTTCAACAGGATCTCCACCGCCGGATACTACTCCCTG
GAGCGCTGCCGCGAGGCGGTGACTTCGTACTTTGTTCAGGCGAACCCAAA
CGCCTTGCCCTACGGCTTCGTCCCCGAGATAGCCTCCTTGAAACACGCCG
CCGCGGCGGGCAGCGTTGCGGCAAAACCCGGGGGTTCCCAAGCAGAGGCC
AACCCAGCGGCAGTTCCTCCGGCACCCGCGGGGGCGTCGGCGCAAGCGGA
GGTTGCTCAGGGTGAAGGTGGTGGGCCTGGGAGTGGCACTGTGACTGATC
TGTCGGATTCGCCTAGAGAGAAGGAGTCAGAAACTGTGCGAGTGAAAGAG
GAGCTTCCGGCGACGGAGGTCGAGGACGAGCAGGACCTGCAAGCTTTCGT
GGCCACCGCCGGGAGCGAGCGGTTGGTGTTGGTTGACTTCGGGGCGGAGT
GGTGCAAGAACTGCAAGGCGATATTGCCTCTCGTGCGCGACCTCCCGCAG
CGGTTCGATGGGACTGTCGCGGTGGCCACGGCTGACGTGGATAAGGCGGT
GGAACTCGCCGACGAGCGCGAAGTGACCACCATTCCGCACTTCATCCTCC
TCAAACACGGTGTTCAGGTGGACACCTACACCGGCAGTTCGGAAACGGAC
CTGCTGAGAAAGCTTTCACAGCACCTCCCTAACGTTGGGACCCCGGCAAC
AGAGCCAAGCCCGGCCGGCAGCGGATCTGCAGGCGCCGGTTCGAGCGGTG
CCACGATCCGTAGCGGCCCGGGAGAACACGCCAAGAGCGTGAACGGGGAA
GATGTTCCAGGCGAAAACTCCGCCGGCCTCAAGGCAGCGGAGGCGCTCAT
CGACGCGTTCGACGGTAACGTGGACGTCGCTCGACTCTTGTGCGACATCC
GACAGCACGCCGCCGAAGCTTATGGTGGCACCAGTTTCAACCCCTCTCGG
CGGCGGCTGCCACCACCACCACCACTGTCGCCACGAGCTCCGGGAGAAAC
ACCTGTTCAGAAGACGAAGAAGGCCGCGGCTGGTTCGAGTTCCGGACAGC
CGTGGGCAGTGTCCGCCGCTGCTGCTGTTGTCGAGCAGCAGCAGGGTGCA
ACAGTGGAAGATGGCAGGAGGGGAGAGAAACCGGGGACGAGCGGAAGCGG
TTCGTCCGTCACGACATCCAAGCCTGCTGCTGCTGCTGCTGCTGCCGCCG
CCGCGGTCTCTGCCACGCGGAAAAGCAGACAAGAAGTGGAAGCAGAAGCC
ACCAAACTCGGGGCGTCAGGCGGCTGA
back to top