prot_Ecto-sp13_S_contig6149.16840.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6149.16840.1
Unique Nameprot_Ecto-sp13_S_contig6149.16840.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length255
Homology
BLAST of mRNA_Ecto-sp13_S_contig6149.16840.1 vs. uniprot
Match: A0A6H5KT28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT28_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 1.550e-104
Identity = 174/245 (71.02%), Postives = 178/245 (72.65%), Query Frame = 0
Query:    1 IDKEAAQTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVNTRFQKFCLDPLLTANVPPTAGTVLPAKIKSLRSSASPLGIVKTPCALETPAVSIEKTVGRFALCPTQAHRGTGNYAYVNVVREVAAATSHFRVLALSATPGSDIKV 245
            IDKEAA+TWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACY+IMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVV                                                                   +AHRGTGNYAYVNV+REVAAATSHFRVLALSATPGSDIKV
Sbjct:   98 IDKEAAKTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYNIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVV-----------------------------------------------------------------VDEAHRGTGNYAYVNVIREVAAATSHFRVLALSATPGSDIKV 277          
BLAST of mRNA_Ecto-sp13_S_contig6149.16840.1 vs. uniprot
Match: D7FP48_ECTSI (DEAD box helicase similar to CG7922-PA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP48_ECTSI)

HSP 1 Score: 324 bits (830), Expect = 4.280e-98
Identity = 171/244 (70.08%), Postives = 176/244 (72.13%), Query Frame = 0
Query:    1 IDKEAAQTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVNTRFQKFCLDPLLTANVPPTAGTVLPAKIKSLRSSASPLGIVKTPCALETPAVSIEKTVGRFALCPTQAHRGTGNYAYVNVVREVAAATSHFRVLALSATPGSDIK 244
            ID+EAAQTWIYPVNYPIRQYQLQIVTQALF+NTLVALPTGLGKTLIAAVVMYNYYRWFP GKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVV                                                                   +AHRGTGNYAYVNV+REVAAAT+HFRVLALSATPGSDIK
Sbjct:  102 IDEEAAQTWIYPVNYPIRQYQLQIVTQALFQNTLVALPTGLGKTLIAAVVMYNYYRWFPRGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVV-----------------------------------------------------------------VDEAHRGTGNYAYVNVIREVAAATAHFRVLALSATPGSDIK 280          
BLAST of mRNA_Ecto-sp13_S_contig6149.16840.1 vs. uniprot
Match: A0A397EJI9_9STRA (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EJI9_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.480e-79
Identity = 135/248 (54.44%), Postives = 167/248 (67.34%), Query Frame = 0
Query:    1 IDKEAAQTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVNTRFQKFCLD--PLLTANVPPTAGTVLPAKIKSLRSSASPLGIVKTPCALETPAVSIEKTVGRFA-LCPTQAHRGTGNYAYVNVVREVAAATSHFRVLALSATPGSDIKV 245
            ID++ A  WIYP NYP+R YQ  I   AL +NTLV LPTGLGKTLIAAVVM+N+YRWFP GK+VF+APTKPLV+QQI AC+D+M +P+ D AELQG+V P KR QLW  +RVFFCTPQS+ NDI+   CD   FVCVV+ + Q  C D  P+  +++    G V PAK K L   A+      TP +L+         V  F  +   +AHR TGNYAYV V++ +AA  S FRVLALSATPG+   V
Sbjct:   14 IDRDLATQWIYPSNYPVRAYQQSISRAALLQNTLVCLPTGLGKTLIAAVVMFNFYRWFPRGKIVFMAPTKPLVSQQIQACHDVMPIPQSDMAELQGNVAPAKRKQLWATKRVFFCTPQSLQNDIERGNCDVRSFVCVVSQQIQA-CHDVMPIPQSDMAELQGNVAPAKRKQLW--ATKRVFFCTPQSLQNDIERGNCDVRSFVCVVVDEAHRATGNYAYVVVIKAIAAKVSGFRVLALSATPGAKFDV 258          
BLAST of mRNA_Ecto-sp13_S_contig6149.16840.1 vs. uniprot
Match: A0A418AL25_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AL25_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.600e-69
Identity = 118/245 (48.16%), Postives = 140/245 (57.14%), Query Frame = 0
Query:    1 IDKEAAQTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVNTRFQKFCLDPLLTANVPPTAGTVLPAKIKSLRSSASPLGIVKTPCALETPAVSIEKTVGRFALCPTQAHRGTGNYAYVNVVREVAAATSHFRVLALSATPGSDIKV 245
            ID++ A  WIYP NYP+R YQ  I   AL++NTLV LPTGLGKTLIAAVVMYN++RWFP GK+VF+APTKPLV+QQI AC+D+M +P+ D AELQG+V P KR  LW  +RVFFCTPQSM NDI+   CD   FVCVV                                                                   +AHR TGNYAYV V++ +AA  S FRVLALSATPG+   V
Sbjct:   23 IDRDLATQWIYPSNYPVRAYQQSISRAALYQNTLVCLPTGLGKTLIAAVVMYNFHRWFPRGKIVFMAPTKPLVSQQIQACHDVMPIPQHDMAELQGNVAPSKRKALWATKRVFFCTPQSMQNDIERGNCDVRSFVCVV-----------------------------------------------------------------VDEAHRATGNYAYVTVIKAIAAKISGFRVLALSATPGAKFDV 202          
BLAST of mRNA_Ecto-sp13_S_contig6149.16840.1 vs. uniprot
Match: A0A1V9Z2F6_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2F6_9STRA)

HSP 1 Score: 221 bits (563), Expect = 4.180e-63
Identity = 120/245 (48.98%), Postives = 139/245 (56.73%), Query Frame = 0
Query:    1 IDKEAAQTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVNTRFQKFCLDPLLTANVPPTAGTVLPAKIKSLRSSASPLGIVKTPCALETPAVSIEKTVGRFALCPTQAHRGTGNYAYVNVVREVAAATSHFRVLALSATPGSDIKV 245
            ID++ A  WIYP NYP+R YQ  I   ALF NTLV LPTGLGKTLIAAVVMYNYYRWFP GK+VF+APTKPLV+QQI AC+++M     D AELQG+V P +R QLW E+RVFFCTPQSM ND++   CD  +FVCVV                                                                   +AHR TGNYAYV VV+ +AA  S FRVLALSATPG+   V
Sbjct:  168 IDRDLATQWIYPSNYPVRTYQQTITRAALFHNTLVCLPTGLGKTLIAAVVMYNYYRWFPTGKIVFMAPTKPLVSQQIQACHNVMPFAHSDMAELQGNVAPTRRKQLWAEKRVFFCTPQSMQNDVELGNCDVTKFVCVV-----------------------------------------------------------------VDEAHRATGNYAYVMVVKAIAAKISGFRVLALSATPGAKFDV 347          
BLAST of mRNA_Ecto-sp13_S_contig6149.16840.1 vs. uniprot
Match: A0A3N0YYC0_ANAGA (Fanconi anemia group M protein n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0YYC0_ANAGA)

HSP 1 Score: 211 bits (538), Expect = 4.440e-63
Identity = 114/243 (46.91%), Postives = 133/243 (54.73%), Query Frame = 0
Query:    2 DKEAAQTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVNTRFQKFCLDPLLTANVPPTAGTVLPAKIKSLRSSASPLGIVKTPCALETPAVSIEKTVGRFALCPTQAHRGTGNYAYVNVVREVAAATSHFRVLALSATPGSDIK 244
            D  A + WIYP NYP+RQYQLQI   AL +NTLV LPTGLGKT IAAV+MYNYYRWFP GK+VF+APTKPLVAQQI ACY +MG+P+Q  AEL GS    +R +LW  RRVFF TPQ M ND+    C  A+  CVV        +D                                                         +AH+ TGN+AY  VVRE+      FRVLALSATPG D+K
Sbjct:  156 DPSAGRVWIYPTNYPVRQYQLQICEAALLRNTLVCLPTGLGKTFIAAVLMYNYYRWFPAGKIVFMAPTKPLVAQQIQACYGVMGIPQQHMAELTGSTAAPQRRELWRSRRVFFLTPQVMVNDLSRNTCPAAQVKCVV--------ID---------------------------------------------------------EAHKATGNHAYCQVVRELCNQMQQFRVLALSATPGGDVK 333          
BLAST of mRNA_Ecto-sp13_S_contig6149.16840.1 vs. uniprot
Match: A0A6G0X567_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X567_9STRA)

HSP 1 Score: 223 bits (568), Expect = 6.190e-63
Identity = 119/245 (48.57%), Postives = 139/245 (56.73%), Query Frame = 0
Query:    1 IDKEAAQTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVNTRFQKFCLDPLLTANVPPTAGTVLPAKIKSLRSSASPLGIVKTPCALETPAVSIEKTVGRFALCPTQAHRGTGNYAYVNVVREVAAATSHFRVLALSATPGSDIKV 245
            ID++ A  WIYP NYP+R YQ  I   ALF+NTLV LPTGLGKTLIAAVVMYN+YRWFP GK+VF+APTKPLV+QQI AC+D+M +P+ D AELQG+V P KR  LW  +RVFFCTPQS+ NDI+   CD   FVCVV                                                                   +AHR TGNYAYV  +R +AA  S FR+LALSATPGS   V
Sbjct:   26 IDRDLATQWIYPSNYPVRIYQQTIARAALFQNTLVCLPTGLGKTLIAAVVMYNFYRWFPRGKIVFMAPTKPLVSQQIQACHDVMPIPQHDMAELQGNVAPAKRKLLWSTKRVFFCTPQSLQNDIERGNCDVRSFVCVV-----------------------------------------------------------------VDEAHRATGNYAYVVAIRHIAAKISGFRILALSATPGSKFDV 205          
BLAST of mRNA_Ecto-sp13_S_contig6149.16840.1 vs. uniprot
Match: A0A3R7Y455_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7Y455_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.680e-62
Identity = 118/245 (48.16%), Postives = 140/245 (57.14%), Query Frame = 0
Query:    1 IDKEAAQTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVNTRFQKFCLDPLLTANVPPTAGTVLPAKIKSLRSSASPLGIVKTPCALETPAVSIEKTVGRFALCPTQAHRGTGNYAYVNVVREVAAATSHFRVLALSATPGSDIKV 245
            ID++ A  WIYP NYP+R YQ  I   AL +NTLV LPTGLGKTLIAAVVM+N+YRWFP GK+VF+APTKPLV+QQI AC+D+M +P+ D AELQG+V P KR QLW  +RVFFCTPQS+ NDI+   CD   FVCVV                                                                   +AHR TGNYAYV V++ +AA  S FRVLALSATPG+   V
Sbjct:   14 IDRDLATQWIYPSNYPVRAYQQSISRAALLQNTLVCLPTGLGKTLIAAVVMFNFYRWFPRGKIVFMAPTKPLVSQQIQACHDVMPIPQSDMAELQGNVAPAKRKQLWATKRVFFCTPQSLQNDIERGNCDVRSFVCVV-----------------------------------------------------------------VDEAHRATGNYAYVVVIKAIAAKVSGFRVLALSATPGAKFDV 193          
BLAST of mRNA_Ecto-sp13_S_contig6149.16840.1 vs. uniprot
Match: A0A418BWH5_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BWH5_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.870e-62
Identity = 118/245 (48.16%), Postives = 140/245 (57.14%), Query Frame = 0
Query:    1 IDKEAAQTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVNTRFQKFCLDPLLTANVPPTAGTVLPAKIKSLRSSASPLGIVKTPCALETPAVSIEKTVGRFALCPTQAHRGTGNYAYVNVVREVAAATSHFRVLALSATPGSDIKV 245
            ID++ A  WIYP NYP+R YQ  I   AL +NTLV LPTGLGKTLIAAVVM+N+YRWFP GK+VF+APTKPLV+QQI AC+D+M +P+ D AELQG+V P KR QLW  +RVFFCTPQS+ NDI+   CD   FVCVV                                                                   +AHR TGNYAYV V++ +AA  S FRVLALSATPG+   V
Sbjct:   14 IDRDLATQWIYPSNYPVRAYQQSISRAALLQNTLVCLPTGLGKTLIAAVVMFNFYRWFPRGKIVFMAPTKPLVSQQIQACHDVMPIPQSDMAELQGNVAPAKRKQLWATKRVFFCTPQSLQNDIERGNCDVRSFVCVV-----------------------------------------------------------------VDEAHRATGNYAYVVVIKAIAAKVSGFRVLALSATPGAKFDV 193          
BLAST of mRNA_Ecto-sp13_S_contig6149.16840.1 vs. uniprot
Match: A0A1V9ZRQ8_9STRA (DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRQ8_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.880e-62
Identity = 117/245 (47.76%), Postives = 141/245 (57.55%), Query Frame = 0
Query:    1 IDKEAAQTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVVMYNYYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDPKKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVNTRFQKFCLDPLLTANVPPTAGTVLPAKIKSLRSSASPLGIVKTPCALETPAVSIEKTVGRFALCPTQAHRGTGNYAYVNVVREVAAATSHFRVLALSATPGSDIKV 245
            ID++ A  WIYP NYPIR YQ  I   ALF NTLV LPTGLGKTLIAAVV+YN+YRWFP+GK+VF+APTKPLV+QQI AC+D+M +P+ D A+LQG+V P +R QLW ++RVFFCTPQS+ NDI    C+ + FVC+V                                                                   +AHR  GNYAYV VV+ +AA  S FRVLALSATPGS   V
Sbjct:  145 IDRDLASNWIYPSNYPIRTYQQTITRAALFHNTLVCLPTGLGKTLIAAVVIYNFYRWFPQGKIVFMAPTKPLVSQQIQACHDVMPIPQADMAKLQGNVPPARRKQLWAQKRVFFCTPQSLQNDIDRGNCEVSSFVCIV-----------------------------------------------------------------VDEAHRAVGNYAYVMVVKAIAAKISGFRVLALSATPGSKFDV 324          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6149.16840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT28_9PHAE1.550e-10471.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP48_ECTSI4.280e-9870.08DEAD box helicase similar to CG7922-PA n=1 Tax=Ect... [more]
A0A397EJI9_9STRA3.480e-7954.44Helicase ATP-binding domain-containing protein (Fr... [more]
A0A418AL25_9STRA2.600e-6948.16Helicase ATP-binding domain-containing protein n=1... [more]
A0A1V9Z2F6_9STRA4.180e-6348.98DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna... [more]
A0A3N0YYC0_ANAGA4.440e-6346.91Fanconi anemia group M protein n=1 Tax=Anabarilius... [more]
A0A6G0X567_9STRA6.190e-6348.57Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A3R7Y455_9STRA2.680e-6248.16Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A418BWH5_9STRA2.870e-6248.16Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]
A0A1V9ZRQ8_9STRA2.880e-6247.76DEAD/DEAH box RNA helicase (Fragment) n=1 Tax=Thra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 13..254
e-value: 5.8E-4
score: 29.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 24..255
score: 14.64
IPR006935Helicase/UvrB, N-terminalPFAMPF04851ResIIIcoord: 16..138
e-value: 1.4E-14
score: 54.4
NoneNo IPR availableGENE3D3.40.50.300coord: 13..139
e-value: 1.1E-35
score: 124.9
NoneNo IPR availablePANTHERPTHR14025FAMILY NOT NAMEDcoord: 1..138
coord: 206..244
IPR039686FANCM/Mph1-likePANTHERPTHR14025:SF20FANCONI ANEMIA GROUP M PROTEINcoord: 1..138
IPR039686FANCM/Mph1-likePANTHERPTHR14025:SF20FANCONI ANEMIA GROUP M PROTEINcoord: 206..244
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6149contigEcto-sp13_S_contig6149:2341..4504 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6149.16840.1mRNA_Ecto-sp13_S_contig6149.16840.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6149 2341..4504 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6149.16840.1 ID=prot_Ecto-sp13_S_contig6149.16840.1|Name=mRNA_Ecto-sp13_S_contig6149.16840.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=255bp
IDKEAAQTWIYPVNYPIRQYQLQIVTQALFKNTLVALPTGLGKTLIAAVV
MYNYYRWFPEGKVVFLAPTKPLVAQQISACYDIMGVPEQDTAELQGSVDP
KKRAQLWDERRVFFCTPQSMANDIKHKRCDPARFVCVVNTRFQKFCLDPL
LTANVPPTAGTVLPAKIKSLRSSASPLGIVKTPCALETPAVSIEKTVGRF
ALCPTQAHRGTGNYAYVNVVREVAAATSHFRVLALSATPGSDIKVRLSSL
LLLRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR006935Helicase/UvrB_N
IPR039686FANCM/Mph1-like
IPR027417P-loop_NTPase