prot_Ecto-sp13_S_contig6148.16838.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6148.16838.1
Unique Nameprot_Ecto-sp13_S_contig6148.16838.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6148.16838.1 vs. uniprot
Match: A0A6H5L4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T0_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 1.890e-63
Identity = 115/131 (87.79%), Postives = 116/131 (88.55%), Query Frame = 0 
Query:    6 RPLTGAKTDGGSGGNGAWVPPSEFPPGHSEAPAA-ATPAGVEGSNVGPAAAEGVAPEFLATSGPLKIRDEADPFSMELGVTEKGHIVRVLERSGLWARVSYRGREDGWMLTANKRGPILVPSEDQASAARE 135
            RPLTGAKTDGGSGGNGAW PPSEFPPGHSE PA  A PA VEGS VGPAAAEGV PEFLATSG     DEADPFSMELGVTEKGHIVRVLE+SGLWARVSYRGREDGWMLTANKRGP LVP EDQASAARE
Sbjct:  319 RPLTGAKTDGGSGGNGAWAPPSEFPPGHSEEPAPPAPPARVEGSKVGPAAAEGVGPEFLATSG-----DEADPFSMELGVTEKGHIVRVLEKSGLWARVSYRGREDGWMLTANKRGPTLVPPEDQASAARE 444
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BLAST of mRNA_Ecto-sp13_S_contig6148.16838.1 vs. uniprot
Match: D7G7L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L6_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 4.640e-44
Identity = 103/217 (47.47%), Postives = 109/217 (50.23%), Query Frame = 0 
Query:    7 PLTGAKTDGGSGGNGAWVPPSEFPPGHSEAPAAATPAGVEGSNVGPAAAEGVAPEFLATSGPL----------------------------------------------------------------------------------------KIRDEADPFSMELGVTEKGHIVRVLERSGLWARVSYRGREDGWMLTANKRGPILVPSEDQASAARE 135
            PLTGAK DGGSGGNGAW PPSEFPPGHS+A      AGVEGS VGPAAAEGV PEFLATSGPL                                                                                        K+R+EADPFSM+LG   KG IV+VLE S LW RV YRGREDGW+LTANKRGP LVPSEDQASAA E
Sbjct:  763 PLTGAKADGGSGGNGAWAPPSEFPPGHSKAXXXXA-AGVEGSKVGPAAAEGVGPEFLATSGPLTGAKQTPTAPEVSGPGAAAGEDRPLTGGGKGAWVPPSEFPPGHEGGAPSXXXXXXXXXXXXXXXXXXXXXXAGDEAVSAEFFTALGFVKVREEADPFSMDLGSVRKGDIVKVLETSKLWVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAGE 978
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6148.16838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4T0_9PHAE1.890e-6387.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7L6_ECTSI4.640e-4447.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003646SH3-like domain, bacterial-typePFAMPF08239SH3_3coord: 68..114
e-value: 3.2E-7
score: 30.5
NoneNo IPR availableGENE3D2.30.30.40coord: 61..118
e-value: 3.3E-5
score: 25.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6148contigEcto-sp13_S_contig6148:2908..3862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6148.16838.1mRNA_Ecto-sp13_S_contig6148.16838.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6148 2908..3862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6148.16838.1 ID=prot_Ecto-sp13_S_contig6148.16838.1|Name=mRNA_Ecto-sp13_S_contig6148.16838.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
PDDDDRPLTGAKTDGGSGGNGAWVPPSEFPPGHSEAPAAATPAGVEGSNV
GPAAAEGVAPEFLATSGPLKIRDEADPFSMELGVTEKGHIVRVLERSGLW
ARVSYRGREDGWMLTANKRGPILVPSEDQASAARE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003646SH3-like_bac-type