prot_Ecto-sp13_S_contig6148.16837.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6148.16837.1
Unique Nameprot_Ecto-sp13_S_contig6148.16837.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length162
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6148.16837.1 vs. uniprot
Match: A0A6H5L4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T0_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 1.130e-88
Identity = 151/162 (93.21%), Postives = 152/162 (93.83%), Query Frame = 0 
Query:    1 AFASSSGGALPEDPSDRPLTGAKPPPAAPTAATGDSEXXXXXGGGKGAWVPPSEFPPGEEDGPVRRGDGGDALVKKASAGSVVDAAGQEKDSAGDETVSSEYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLETSKLWVRVCYRGREDGWVLTANKRGPT 162
            AFASSSGGALPEDP+DRPLTGAKPPPAA TAATGDSE     GGGKGAWVPPSEFPPGEEDGPV  GDGGD LVKKASAGSVVDAAGQEKDSAGDE VSSEYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLETSKLWVRVCYRGREDGWVLTANKRGPT
Sbjct:  624 AFASSSGGALPEDPADRPLTGAKPPPAASTAATGDSEDRPLTGGGKGAWVPPSEFPPGEEDGPVGSGDGGDVLVKKASAGSVVDAAGQEKDSAGDEAVSSEYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLETSKLWVRVCYRGREDGWVLTANKRGPT 785
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BLAST of mRNA_Ecto-sp13_S_contig6148.16837.1 vs. uniprot
Match: D7G7L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L6_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 8.930e-85
Identity = 145/162 (89.51%), Postives = 148/162 (91.36%), Query Frame = 0 
Query:    1 AFASSSGGALPEDPSDRPLTGAKPPPAAPTAATGDSEXXXXXGGGKGAWVPPSEFPPGEEDGPVRRGDGGDALVKKASAGSVVDAAGQEKDSAGDETVSSEYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLETSKLWVRVCYRGREDGWVLTANKRGPT 162
            AFA++ GGALPEDPSDRPLTGAKPPPAAPTAATG SE     GGGKGAWVPPSEFPPG+EDGPV RGDGGDALVKKASA SVVDA GQ  DSAGDE VSSEYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLE SKLWVRVCYRGREDGWVLTANKRGPT
Sbjct:  985 AFAANGGGALPEDPSDRPLTGAKPPPAAPTAATGASEDRPLTGGGKGAWVPPSEFPPGQEDGPVSRGDGGDALVKKASAESVVDAPGQGNDSAGDEAVSSEYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLEASKLWVRVCYRGREDGWVLTANKRGPT 1146
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6148.16837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4T0_9PHAE1.130e-8893.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7L6_ECTSI8.930e-8589.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003646SH3-like domain, bacterial-typePFAMPF08239SH3_3coord: 109..155
e-value: 3.0E-8
score: 33.8
NoneNo IPR availableGENE3D2.30.30.40coord: 98..158
e-value: 1.4E-6
score: 29.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6148contigEcto-sp13_S_contig6148:50..1301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6148.16837.1mRNA_Ecto-sp13_S_contig6148.16837.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6148 48..1301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6148.16837.1 ID=prot_Ecto-sp13_S_contig6148.16837.1|Name=mRNA_Ecto-sp13_S_contig6148.16837.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp
AFASSSGGALPEDPSDRPLTGAKPPPAAPTAATGDSEDRPLTGGGKGAWV
PPSEFPPGEEDGPVRRGDGGDALVKKASAGSVVDAAGQEKDSAGDETVSS
EYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLETSKLWVRVCYRGRED
GWVLTANKRGPT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003646SH3-like_bac-type