prot_Ecto-sp13_S_contig11973.1683.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11973.1683.1
Unique Nameprot_Ecto-sp13_S_contig11973.1683.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length128
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11973.1683.1 vs. uniprot
Match: D7FTY4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY4_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 9.490e-30
Identity = 71/112 (63.39%), Postives = 81/112 (72.32%), Query Frame = 0 
Query:    1 MSQEDRKQSRSSKKVESRRLCEENISSRDPCLNGAVDRQAEAAQELVSKLSSGLGNKYEKAKMMRDIQGAKNDTTATGVPLAARTAYLPVVDHTTRISGMQAGSTFLLWAVF 112
            MSQEDRKQSRSSKK E  R  E   +++   L+GAVDRQAEAAQ+LVSKL+ GLGNKYE AKMMRDI+GAKN TTATG PL AR         T ++   QAGSTFL  A+F
Sbjct:   26 MSQEDRKQSRSSKKAEEGRQAESQATAQS-MLDGAVDRQAEAAQKLVSKLNPGLGNKYETAKMMRDIEGAKNVTTATGTPLHARC--------TKQLLTTQAGSTFLYSALF 128
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BLAST of mRNA_Ecto-sp13_S_contig11973.1683.1 vs. uniprot
Match: D7FTX9_ECTSI (U3 small nucleolar ribonucleoprotein protein MPP10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTX9_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 4.680e-16
Identity = 51/78 (65.38%), Postives = 55/78 (70.51%), Query Frame = 0 
Query:    1 MSQEDRKQSRSSKKVESRRLCEENISSRDPCLNGAVDRQAEAAQELVSKLSSGLGNKYEKAKMMRDIQGAKNDTTATG 78
            MSQEDRK+SRSSKK   R+                  RQAEAAQ+LVSKL+ GLGNKYEKAKMMRDIQGAKN TTATG
Sbjct:  502 MSQEDRKRSRSSKKAVRRK----------------ARRQAEAAQKLVSKLNPGLGNKYEKAKMMRDIQGAKNVTTATG 563
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11973.1683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTY4_ECTSI9.490e-3063.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTX9_ECTSI4.680e-1665.38U3 small nucleolar ribonucleoprotein protein MPP10... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11973contigEcto-sp13_S_contig11973:744..1748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11973.1683.1mRNA_Ecto-sp13_S_contig11973.1683.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11973 728..1763 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11973.1683.1 ID=prot_Ecto-sp13_S_contig11973.1683.1|Name=mRNA_Ecto-sp13_S_contig11973.1683.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp
MSQEDRKQSRSSKKVESRRLCEENISSRDPCLNGAVDRQAEAAQELVSKL
SSGLGNKYEKAKMMRDIQGAKNDTTATGVPLAARTAYLPVVDHTTRISGM
QAGSTFLLWAVFLGPYRVEMLYTTHPP*
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