mRNA_Ecto-sp13_S_contig6144.16831.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6144.16831.1 vs. uniprot
Match: D7FSB2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSB2_ECTSI) HSP 1 Score: 997 bits (2577), Expect = 0.000e+0 Identity = 480/501 (95.81%), Postives = 491/501 (98.00%), Query Frame = 3
Query: 204 VSTTSMAAQAVAWPDEVSAPSLDQPIRARILAVAPEDVASPFEDRGTAVPWFEVWDHIAKRVKWADTGVEMTVFREESLRKGKDSSDERARFNDLAARSDVFVGSAIQDSATAEWIASVIEKAEITTRFSAGCPPELARTALVGEFRPDPPAPAFVRILPDFLRDFIGGPNSGTKKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPGTVDCMMENCKQEVIDCAKDPNCRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTINGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEEKEMQRVEKAFDSCGIKLWELFPVDNTNDKGAPLGLPDSFAANNDRPTLV 1706
+STTSMAAQAVAWPDEV+APSLDQP+RARILAVAP+ VASPFEDRGTAVPWFEVWDHIAKRVKWADTGVEM VFREESLRK KDSS ERARFNDLAARSDVFVGSAIQD ATAEWIASVIEKA+ITTRFSAGCPPELART+LVG+FRPDPPAPA VRILPDFLRD IGGPNSGTKKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNP TVDCMMENCKQEVIDCAKD +CRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTI GEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPE+KEM+RVEKAFDSCGIKLWELFPVDNTND+GAPLGLPDSFAANNDRPTLV
Sbjct: 1 MSTTSMAAQAVAWPDEVTAPSLDQPVRARILAVAPDGVASPFEDRGTAVPWFEVWDHIAKRVKWADTGVEMKVFREESLRKDKDSSGERARFNDLAARSDVFVGSAIQDPATAEWIASVIEKADITTRFSAGCPPELARTSLVGKFRPDPPAPALVRILPDFLRDLIGGPNSGTKKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPDTVDCMMENCKQEVIDCAKDADCRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTIKGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEQKEMERVEKAFDSCGIKLWELFPVDNTNDEGAPLGLPDSFAANNDRPTLV 501
BLAST of mRNA_Ecto-sp13_S_contig6144.16831.1 vs. uniprot
Match: A0A835Z990_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z990_9STRA) HSP 1 Score: 444 bits (1143), Expect = 3.170e-145 Identity = 220/441 (49.89%), Postives = 287/441 (65.08%), Query Frame = 3
Query: 375 IAKRVKWADT-GVEMTVFREESLRKGKDSSDERARFNDLAARSDVFVGSAIQDSATAEWIASVIEKAEITTRFSAGCPPELARTALVGEFRPDPPAPAFVRILPDFLRDFIGGPNSGTKKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPGTVDCMMENCKQEVIDCAKDPNCRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKE-----AYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTINGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEEKEMQRVEKAFDSCGIKLWELFPVDNTNDKGAPLGLPDSFA 1679
+A+RV WAD G++M V +L G D A +DVF+ + + D + A IA+ + A + TR PEL +G +RP AF + P L F G+ DR L+ + FYER S+EDL F++L LV++YVT VP G+GK S G V C++ C+ +++ C ++P C+ACI+CL CPPNDQVC+YRCITSYET T E FSLC++ K+NCM N AE+P PDP +RG+PL HET +D+ +GWLG E +SWKV CGQNPAYD+FP+QHQIFYRG+ EG MWYDPVF+V T+ GE+VWRRRHYRV+ PGTF FSVLDNGV S EYWRI+ ++DLSW YY+GAA AAGQ+Y G+LL++ DG+WP M+ V AF +CGI++WEL+P N APL LP FA
Sbjct: 4 VARRVAWADPRGLQMDVI---ALPDGGSPLDV-APIEAALHGADVFIATGVTDRSEAGAIAAAVRAAGVATRLVFDSAPELDTLTKLGNYRPA----AFAGV-PRRLSIFRAALRGGSGDDRALYTLVKTFYERCSAEDLAFMALSLVNAYVTEVPAAQGLGKKSGVGMVACILTKCRAQLLACVREPTCKACITCLNKCPPNDQVCSYRCITSYETATFEQFSLCLMTKHNCMGNHAEMPASPDPAPMTHYRGRPLDHETGEDILIGWLGGEDQGLRPWSWKVACGQNPAYDYFPNQHQIFYRGKREGTMWYDPVFQVNTLAGEKVWRRRHYRVRRGTAPGTFFFSVLDNGVTSKEYWRIVAAAEDLSWACVYYSGAAAAAGQAYAGALLITPDGEWPAPAAMEEVTAAFATCGIEMWELYPCHNEPITDAPLDLPPEFA 435
BLAST of mRNA_Ecto-sp13_S_contig6144.16831.1 vs. uniprot
Match: D8QN47_SELML (VDE domain-containing protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QN47_SELML) HSP 1 Score: 406 bits (1044), Expect = 2.420e-130 Identity = 212/475 (44.63%), Postives = 293/475 (61.68%), Query Frame = 3
Query: 285 ARILAVAPEDVASPFEDRGTAVPWFEVWDHIAKRVKWADTGVEMTVFREESLRKGKDSSDERARFNDLAARSDVFVGSAIQDSATAEWIASVIEKAEITTRFSAGCPPELARTALVGEFRPDPPAPAFVRILP-----DFLRDFIGGPNSGTKKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPGTVDCMMENCKQEVIDCAKDPNCRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTINGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEEKEMQRVEKAFDSCGIKLWELFPV--------DNTNDKGAPLGLPD 1670
A+++AV E+ SP ++ PW EV +H+ KR++W D EM VF +ESL E F+ A++D+ +G + + T WI S F + + + T L G V++LP D LR + P + K + D + N + R+SS+++ F LVL+DSYV VP + + + ++ + CM +NC +E++ C DP+CR + CLT+C PNDQVC+YRCI SYET T+E SLC+LQKNNC+ SAEI + P FRG+ LTH A+D+F+GWLG +SW+V GQN AYD F +Q Q++YRG + MWYDPVF+V T+ GE VWRRRHYR + PGTF F+VLDNGVVS E+WRI+D +DDLSWG+FYY+GAATAAGQSY+G++LVS DG WP E+ +RV A CGIKLWE++ V D+ + + PLGLP+
Sbjct: 5 AKLVAVIGENAVSPLQE----TPWLEVMNHMVKRLRWTDASFEMLVFTDESL-------PENREFSSAVAKADILLGLGLGNPDTVSWINSASSSVPTRICFDST---DNSGTWLGG-----------VKVLPLESPVDRLRSIV--PGTKLAKGLKVLDLVTNAWSRHSSDNVCFALLVLIDSYVAPVPLLKNL-RATSLSQIQCMAKNCGKEILACLLDPSCRKALDCLTSCAPNDQVCSYRCIVSYETPTLEAISLCILQKNNCLGLSAEIQSQPVVKPLEKFRGQELTHTLAEDIFIGWLGTLKWSWRVAAGQNAAYDHFANQIQLYYRGT-KNSMWYDPVFQVETLEGELVWRRRHYRARRGEVPGTFYFTVLDNGVVSKEFWRIVDCADDLSWGLFYYSGAATAAGQSYSGAVLVSPDGMWPGEQHSERVNAALGRCGIKLWEMYTVTNNRYGDEDDESGEEIPLGLPE 450
BLAST of mRNA_Ecto-sp13_S_contig6144.16831.1 vs. uniprot
Match: UPI001CC58755 (violaxanthin de-epoxidase, chloroplastic n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC58755) HSP 1 Score: 409 bits (1051), Expect = 2.590e-130 Identity = 215/475 (45.26%), Postives = 299/475 (62.95%), Query Frame = 3
Query: 252 VSAPSLDQPIRARILAVAPEDVASPFEDRGTAVPWFEVWDHIAKRVKWADTGVEMTVFREESLRKGKDSSDERARFNDLA-ARSDVFVGSAIQDSATAEWIASVIEKAEITTRFSAGCPPELARTALVGEF-RPDPPAPAFVRILPDFLRDFIGGPNSGTKKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPGTVDCMMENCKQEVIDCAKDPNCRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTINGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEEKEMQRVEKAFDSCGIKLWELFPVDNTNDKGAPLGLPD 1670
V+ P++ P+R I+AV E SP + PW EV H A R+KW D G EM VF ++ + +D R F + +D+ V A+ + + +W+ + + F++ P L L G F + F + L F+ G NS + V T++ ++R+SS+D+ F LV++++Y+ VP + + + T++CM++NC ++++C DPNCR + CL C P DQVC YRCI SYE+ +E FSLCVLQKNNC+ A+IP P P FRG+ L HE A+DLF+GWLG +SW+VV GQNPAYD FP Q+Q+FYRG+ +G WY+PVF+V T+ G+ VWRRR YRVK PGTF FSVLDNGVVSNEYW I+DVSDD SWG+F+Y+GAA AGQSYTG++LVS DG++P EKE Q++ A + CGIK WEL+ VDN + +G PLG+P+
Sbjct: 72 VAEPTVPSPVR--IVAVVGEGSLSPLK----CAPWEEVMLHTADRLKWVDEGFEMLVFNDDI----QQCNDSRVEFLQRELSHADILVIVAVTNEESIKWLQTNSKSISNIICFNSS--PSLTNK-LGGSFIHAETKGNIFSK-----LAGFVQGKNSDKSVEVV--QTVSEAWDRHSSDDIRFCILVIINTYIRPVPILQNL-RSKGLSTLNCMVQNCGPQILNCLLDPNCRNALQCLNRCSPVDQVCNYRCIASYESPQLEAFSLCVLQKNNCLELDAKIPDKPYVPPMVQFRGESLCHEAAEDLFVGWLGNLDWSWRVVAGQNPAYDQFPCQYQLFYRGKAKGSFWYEPVFQVQTLEGKMVWRRRRYRVKRGKVPGTFYFSVLDNGVVSNEYWTIVDVSDDFSWGLFHYSGAARVAGQSYTGAVLVSPDGNYPSEKESQKLVSALEKCGIKDWELYAVDNCSCQGPPLGVPE 525
BLAST of mRNA_Ecto-sp13_S_contig6144.16831.1 vs. uniprot
Match: A0A6J0N021_RAPSA (uncharacterized protein LOC108848422 n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0N021_RAPSA) HSP 1 Score: 405 bits (1041), Expect = 4.650e-129 Identity = 214/469 (45.63%), Postives = 294/469 (62.69%), Query Frame = 3
Query: 267 LDQPIRARILAVAPEDVASPFEDRGTAVPWFEVWDHIAKRVKWADTGVEMTVFREESLRKGKDSSDERA-RFNDLAARSDVFVGSAIQDSATAEWIASVIEKAEITTRFSAGCPPELARTALVGEFRPDPPAPAFVRILPDFLRDFIGGPNSGTKKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPGTVDCMMENCKQEVIDCAKDPNCRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTINGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEEKEMQRVEKAFDSCGIKLWELFPVDNTNDKGAPLGLPD 1670
L+ P+R ++A+ + SP + + W EV H A R+KW D G E+ VF +E LR S+D+RA ++D+ V A+ +S + +WI + + + F + PEL L G DF G K+ + T+ + +ER +S+D+ F LV++++YV VP + + + T+ CM++NC ++++C DPNCR + CL C P DQVC+YRCI SYE+ E FSLCVLQK+NC+ A+IP P P +FRGK L HETA+DLF+GWLG +SW+VV GQNPAYD FP Q+Q+FYRG+G+ WY+PVF+V T+ G+ VWRRR Y VK TP TFR SVLDNGVVSNE+W I+DVSDDLSWG+F+Y GAA AGQSYTG++LV+ DG +PEEKE +R++ A + CGIK WELF VDN + APLG+P+
Sbjct: 71 LESPVR--LVALVGKGEVSPLK----STSWHEVMLHTATRLKWVDEGYELLVFDDEILR----SNDQRAVNLKQELNQTDILVVVAVTNSESVKWIQTNSKSIKNVICFESS--PELMNR-LGGT-------------------DFRSGDKD--KEGTEIVKTVGDAWERRNSDDIRFCLLVIINAYVRPVPVLQNL-RSKGFSTLGCMVKNCGPQILNCLLDPNCRKALQCLNKCSPVDQVCSYRCIASYESPYFEAFSLCVLQKHNCLELDAKIPDKPYVPPMTSFRGKELCHETAEDLFVGWLGDLDWSWRVVAGQNPAYDQFPCQYQLFYRGKGKSSFWYEPVFQVRTLEGKLVWRRRRYSVKRGKTPATFRLSVLDNGVVSNEFWTIVDVSDDLSWGLFHYNGAARVAGQSYTGAVLVAPDGSYPEEKERERLQSALEKCGIKEWELFAVDNCSCDNAPLGIPE 504
BLAST of mRNA_Ecto-sp13_S_contig6144.16831.1 vs. uniprot
Match: A0A6P8DTD5_PUNGR (violaxanthin de-epoxidase, chloroplastic n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8DTD5_PUNGR) HSP 1 Score: 405 bits (1042), Expect = 5.130e-129 Identity = 209/471 (44.37%), Postives = 290/471 (61.57%), Query Frame = 3
Query: 288 RILAVAPEDVASPFEDRGTAVPWFEVWDHIAKRVKWADTGVEMTVFREESLRKGKDSSDERARFNDLAARSDVFVGSAIQDSATAEWIA----------SVIEKAEITTRFSAGCPPELARTALVGEFRPDPPAPAFVRILPDFLRDFIGGPNSGTKKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPGTVDCMMENCKQEVIDCAKDPNCRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTINGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEEKEMQRVEKAFDSCGIKLWELFPVDNTNDKGAPLGLPD 1670
RI+AV E SP + PW EV H A R+KW + EM VF + S R + E R D ++D+ + A+ + + EWI S A +T++ + T+ G F F +++ K+ + T++ + RN+S+D+ F LV++++Y+ VP + + + T++CM++NC ++++C DPNCR + CL C P DQVC YRCI SYE+ +E FSLCVLQKNNC+ AEIP LP P TFRG+ ++ E A+DLF+GWLGK +SW+VV GQNPAYD FP Q+Q+FYRG+ +G WY+PVF+V T+ G+ VWRRR YRVK A PGTF FSVLDNGV SNE+W I+DV+DDLSWG+F+Y+GAA AAGQSYTG++LVS DG +P+EK+ +R+ A + CGIK WELF VDN + PLG+P+
Sbjct: 81 RIVAVVGEGSVSPLKH----APWSEVMLHTATRMKWVNEEFEMRVFSDASCRTSDQPAAETLR--DELTQADILINVAVTNQESVEWIQNNSGSIPNVISFDSSARLTSKLGGS----VIDTSTQGNF--------FAKLVEP-------------KEPMEIVKTVSEAWARNNSDDIRFCLLVIINAYIRPVPILKNL-RSKGFSTLNCMVKNCGPQILNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLGLDAEIPKLPSVPPMVTFRGEEMSLELAEDLFVGWLGKLDWSWRVVAGQNPAYDQFPCQYQLFYRGKAKGSFWYEPVFQVRTLEGKLVWRRRKYRVKRATIPGTFFFSVLDNGVTSNEFWTIVDVADDLSWGLFHYSGAARAAGQSYTGAVLVSPDGQYPDEKQRERLASAMEKCGIKEWELFNVDNCSCVDPPLGIPE 519
BLAST of mRNA_Ecto-sp13_S_contig6144.16831.1 vs. uniprot
Match: A0A1Q3BLS9_CEPFO (VDE domain-containing protein (Fragment) n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BLS9_CEPFO) HSP 1 Score: 402 bits (1032), Expect = 1.190e-127 Identity = 214/497 (43.06%), Postives = 301/497 (60.56%), Query Frame = 3
Query: 204 VSTTSMAAQAVAWPDEVSAPSLDQPIRARILAVAPEDVASPFEDRGTAVPWFEVWDHIAKRVKWADTGVEMTVFREESLRKGKDSSDERARFNDLAARSDVFVGSAIQDSATAEWIASVIEKAEITTRFSAGCPPELARTALVGEFRPDPPAPAFVRILPDFLRDFIGGPNSGTKKDRVLW--DTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPGTVDCMMENCKQEVIDCAKDPNCRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTINGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEEKEMQRVEKAFDSCGIKLWELFPVDNTNDKGAPLGLPDSFAANN 1688
++ T A AV E + L +P RI+A+ E SP + W +V H AKR+KW D G EM VF + +L D +D +R+D+ V A+++ + WI + I P LA L G + F +I+ G + K + + T+ ++R++S+D+ FL LV++++Y+ VP + + + T++CM++NC ++++C DPNCR I CL C P DQVC YRCI SYE+ +E FSLCVLQK NC+ +A+IP P P FRGK L HET++DLF+GWLG+ +SW+VV GQNPAYD FP Q+Q+FYRG+ + WY+PVF+V T+ G+ VWRRR YRVK TPGTF FSVLDNGVVSNE+W I+DVSDD SWG+FYY+GAA AGQSY+G++LVS DG +P+E E ++ A D CGIK WEL+ VDN + + PLG+P+ + ++
Sbjct: 49 INRTLTAISAVVETRESAVTELPEP-PVRIVALVGEGTVSPLK----GATWRDVMLHTAKRLKWVDEGYEMLVFTD-NLVLSNDGTD--VNIQKELSRADILVIVAVKNQNSVNWIQT--NSGNIPNMICFDSSPNLANK-LGGSVHSEIKGNIFSKII---------GMSQSKKSNETMEVVQTVYGAWDRHNSDDVRFLLLVIINAYIKPVPILQNL-RSKGFSTLNCMVKNCGPQILNCLLDPNCRKAIQCLNKCNPVDQVCNYRCIASYESPKLEAFSLCVLQKKNCLEMNAKIPEKPYVPPMVKFRGKDLCHETSEDLFVGWLGRLDWSWRVVAGQNPAYDQFPCQYQLFYRGKAKRSFWYEPVFQVKTLEGKMVWRRRKYRVKRGKTPGTFYFSVLDNGVVSNEFWTIVDVSDDFSWGLFYYSGAARVAGQSYSGAVLVSPDGAYPKESESGKIVSALDKCGIKEWELYTVDNCSCQNPPLGIPEGSSLHS 524
BLAST of mRNA_Ecto-sp13_S_contig6144.16831.1 vs. uniprot
Match: A0A2R6RJR5_ACTCC (Violaxanthin de-epoxidase n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RJR5_ACTCC) HSP 1 Score: 402 bits (1032), Expect = 1.480e-127 Identity = 215/489 (43.97%), Postives = 299/489 (61.15%), Query Frame = 3
Query: 210 TTSMAAQAVAWPDEVSA-PSLDQPIRARILAVAPEDVASPFEDRGTAVPWFEVWDHIAKRVKWADTGVEMTVFREESLRKGKDSSDERARFNDLAARSDVFVGSAIQDSATAEWIASVIEKAEITTRFSAGCPPELARTALVGEF-RPDPPAPAFVRILPDFLRDFIGGPNSGTKKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPGTVDCMMENCKQEVIDCAKDPNCRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTINGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEEKEMQRVEKAFDSCGIKLWELFPVDNTNDKGAPLGLPD 1670
T+S AV +E S L+ P+ RI+A+ E SP + + PW EV H AKR+KW D G EM VF + L + R R+ + V A+ + + +W+ + + F + L G F + + F ++ + PN + V+ T++ +ER++S+D+ F L++V++Y+ VP + + + T++CM+ NC ++++C DPNCR + CL C P DQVC YRCI SYE++T+E FSLCVLQK+NC+ A+IPT P P F+G+ L+HE A+DLF+GWLGK +SW+VV GQNPAYD FP Q+Q+FYRG+ G WY+PVF+V+T+ GE VWRRR YRVK PGTF FSVLDNGVVSNE+W I+DVSDD SWG+F+Y GAA AGQSYTG++LVS +G++P E+E + A D CGIK WELF VDN + K PLGLP+
Sbjct: 51 TSSATVSAVLEVNEDSTLKDLNAPL-VRIVALVGEGSISPLK----SAPWLEVMLHTAKRLKWVDEGYEMLVFTDNLLESNSPKLKDLQR---EIRRTSILVIVALTNQESVKWVQTNSQNIPNIFCFDSS---STLTNKLGGLFIQTETKGNIFSKLAK------LSRPNKTNESMEVI-GTISEAWERHNSDDIRFCLLIIVNAYIRPVPILKNL-RAKGFSTLNCMVTNCGSQILNCLLDPNCRKALQCLNQCSPVDQVCNYRCIASYESQTLEEFSLCVLQKHNCLELDAKIPTKPQVPPMVKFQGEDLSHEIAEDLFVGWLGKLEWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFQVMTLEGELVWRRRKYRVKRGKIPGTFYFSVLDNGVVSNEFWTIVDVSDDFSWGLFHYHGAARVAGQSYTGAVLVSPNGEYPNERERLSLVSALDRCGIKEWELFTVDNCSCKDPPLGLPE 520
BLAST of mRNA_Ecto-sp13_S_contig6144.16831.1 vs. uniprot
Match: A0A078FSM8_BRANA ((rape) hypothetical protein n=6 Tax=Brassica TaxID=3705 RepID=A0A078FSM8_BRANA) HSP 1 Score: 400 bits (1029), Expect = 2.740e-127 Identity = 207/466 (44.42%), Postives = 287/466 (61.59%), Query Frame = 3
Query: 288 RILAVAPEDVASPFEDRGTAVPWFEVWDHIAKRVKWADTGVEMTVFREESLRKGKDSSDERA-RFNDLAARSDVFVGSAIQDSATAEWIASVIEKAEITTRFSAGCPPELARTALVGEFRPDPPAPAFVRILPDFLRDFIGGPNSGT----KKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPGTVDCMMENCKQEVIDCAKDPNCRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTINGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEEKEMQRVEKAFDSCGIKLWELFPVDNTNDKGAPLGLPD 1670
R++A+ + SP + + W EV H A+R+KW D G EM VF +E LR S+D+RA +SD+ V A+ +S + +WI + + F + L + +GG + T K+ + T+ + +ER +S+D+ F LV++++YV VP + + + T+ CM++NC ++++C DPNCR + CL C P DQVC+YRCI SYE+ E FSLCVLQK+NC+ A+IP P P +FRGK L HETA+DLF+GWLG +SW+V GQNPAYD FP Q+Q+FYRG+G+ WY+PVF+V T+ G+ VWRRR Y VK TP TFR SVLDNGVVSNE+W I+DV DDLSWG+F+Y GAA AGQSYTG++LV+ DG +PEEKE +R++ A + CGIK WELF VDN + + PLG+P+
Sbjct: 75 RLVALVGKGEVSPLK----STSWHEVMLHTARRLKWVDEGYEMLVFDDEILR----SNDQRAMNLKQELNQSDILVVVAVNNSESVKWIQTNSNNTKNVICFESS----------------------------QDLMNRLGGTDFKTGDTDKEGTEVVKTVGDAWERRNSDDIRFCLLVIINAYVRPVPVLQNL-RSKGFSTLGCMVQNCGPQILNCLLDPNCRKALQCLNKCSPVDQVCSYRCIASYESPYFEAFSLCVLQKHNCLELDAKIPEKPYVPPMTSFRGKELCHETAEDLFVGWLGDLDWSWRVAAGQNPAYDQFPCQYQLFYRGKGKSSFWYEPVFQVRTLEGKLVWRRRRYSVKRGKTPATFRLSVLDNGVVSNEFWTIVDVCDDLSWGLFHYNGAARVAGQSYTGAVLVTPDGSYPEEKEGERLQAALEKCGIKEWELFAVDNCSCENPPLGIPE 503
BLAST of mRNA_Ecto-sp13_S_contig6144.16831.1 vs. uniprot
Match: A0A6A4L4F5_9ERIC (Uncharacterized protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4L4F5_9ERIC) HSP 1 Score: 400 bits (1027), Expect = 6.550e-127 Identity = 210/463 (45.36%), Postives = 291/463 (62.85%), Query Frame = 3
Query: 288 RILAVAPEDVASPFEDRGTAVPWFEVWDHIAKRVKWADTGVEMTVFREESLRKGKDSSDERARFNDLAARSDVFVGSAIQDSATAEWIASVIEKAEITTRFSAGCPPELARTALVGEF-RPDPPAPAFVRILPDFLRDFIGGPNSGTKKDRVLWDTLNNFYERNSSEDLTFLSLVLVDSYVTTVPRVTGIGKDSNPGTVDCMMENCKQEVIDCAKDPNCRACISCLTACPPNDQVCAYRCITSYETKTMEMFSLCVLQKNNCMCNSAEIPTLPDPPAQATFRGKPLTHETAQDLFMGWLGKEAYSWKVVCGQNPAYDFFPSQHQIFYRGRGEGQMWYDPVFKVVTI-NGEEVWRRRHYRVKPAVTPGTFRFSVLDNGVVSNEYWRIIDVSDDLSWGVFYYAGAATAAGQSYTGSLLVSRDGDWPEEKEMQRVEKAFDSCGIKLWELFPVDNTNDKGAPLGLPD 1670
RI+A+ E SP + + PW EV H AKR+KW D G EM+VF + + +E R +R+ + V A+ + + +W+ S + F + P L L G F + + F ++ L P T + L T++ +ER++S+D+ F L+++++Y+ VP + + + T++CM+ NC ++++C DPNCR + CL C P DQVC YRCI SYE+ +E FSLCVLQK+NC+ A+IPT P P FRG+ + HETA+DLF+GWLG +SW+VV GQNPAYD FP Q+Q+FYRG+ +G WY+PVF+V T+ +GE VWRRR YRVK A PGTF FSVLDNGVVSNE+W I+DVSDDLSWG+F+Y GAA AGQSYTG++LVS +G++P E+E ++ A D CGIK WELF VDN + PLGLP+
Sbjct: 69 RIVALVGEGSVSPLK----SAPWLEVMLHTAKRLKWVDEGFEMSVFTDNLCEPNSPAVEELKR---ELSRASILVIVALTNQESVKWVQSNSQNIPNIICFDSS--PTLTNK-LGGSFIQTETKGSIFTKVAELSL------PKK-TNESTELVRTISEAWERHNSDDIRFCLLIIINAYIRPVPILNNL-RAKGFSTLNCMVRNCGPQILNCLLDPNCRNALQCLNQCSPVDQVCNYRCIASYESPNLEEFSLCVLQKHNCLELDAKIPTKPHVPPMVKFRGEDICHETAEDLFVGWLGSLDWSWRVVAGQNPAYDQFPCQYQLFYRGKAKGSFWYEPVFQVRTLADGELVWRRRKYRVKRAKIPGTFNFSVLDNGVVSNEFWTIVDVSDDLSWGLFHYHGAARVAGQSYTGAVLVSPNGEYPNERESTKLVSALDRCGIKEWELFNVDNCSCNDPPLGLPE 513 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6144.16831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6144.16831.1 >prot_Ecto-sp13_S_contig6144.16831.1 ID=prot_Ecto-sp13_S_contig6144.16831.1|Name=mRNA_Ecto-sp13_S_contig6144.16831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=552bp MGVLPMCVVLAAVIPVSCFFTGTRTLVPSRIATSAQQQQQRQKQQQSSRIback to top mRNA from alignment at Ecto-sp13_S_contig6144:978..7199+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6144.16831.1 ID=mRNA_Ecto-sp13_S_contig6144.16831.1|Name=mRNA_Ecto-sp13_S_contig6144.16831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6222bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6144:978..7199+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6144:978..7199+ >mRNA_Ecto-sp13_S_contig6144.16831.1 ID=mRNA_Ecto-sp13_S_contig6144.16831.1|Name=mRNA_Ecto-sp13_S_contig6144.16831.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1656bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6144:978..7199+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |