mRNA_Ecto-sp13_S_contig6143.16830.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6143.16830.1 vs. uniprot
Match: D7G6K8_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K8_ECTSI) HSP 1 Score: 1004 bits (2595), Expect = 0.000e+0 Identity = 526/561 (93.76%), Postives = 534/561 (95.19%), Query Frame = 1
Query: 1 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKLKPDLRESDVQAFLKDRLGKDGGASTQPPPPGPARKLRRRAPSPLEDATVLEWAAMAWTEMQSTGPPGGAGWXXXXXXXXAAASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLKRVEGGKIRHLTQVFRFDQSIAHVANSLVGPLKGETRPLLGCAGKQGKVVLAGGTGLDVWQDQERTLKRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEAVEDMCLMAMGRSEEVKHALLKKLKTIKKLVRFIQESGDRQWANRLRMLDGKDPQALLSELREIQRKQVHPREADTLLSTVHKAKGLEFDTVVLADDFIEVDDIRWTTEPCPQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSLRTFLLVTGAWNSVSLRGVAGRRTPGGGSSLSPPVDEARSSSSHCNLCGGEADAGGGGNRVDLLSRAQAADAQQLATSGRAFASTFITANQRAGGGGLLYAESGSLRPLCCFCVEGVGG 1683
FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKLKPDLRESDVQAFL DRLGKDGGASTQPP APSP+EDATVLEWAAMAWTEMQSTGPPGGAGWXXXXXXXX ASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLKRVEGGKI+HLTQVFRFDQSIAHVANSLVGPLK ETRPLLGCAGKQGKVVL+GGTGL+VWQDQERT+KRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEA+EDMCLMAMGRS EVKHALLKKLKTIKKLVRFIQESGDRQWANRLRMLDGKDPQALLSELREIQRKQVHPREADTLLSTVHKAKGLEFDTVVLADDFIEVDDIRWTT PCPQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSLR FLLVTGAWNSVSLRGVAGRRTPG GSS S P+DEARSSSSHCNLCG ADAGGGGNRVDLLSRAQAADAQQLATSGRAFA+T ITANQRAGGGGLLYAESGSLRPLC VEGVGG
Sbjct: 732 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKLKPDLRESDVQAFLNDRLGKDGGASTQPPXXXXXXXXXXXAPSPVEDATVLEWAAMAWTEMQSTGPPGGAGWXXXXXXXXXXASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLKRVEGGKIQHLTQVFRFDQSIAHVANSLVGPLKRETRPLLGCAGKQGKVVLSGGTGLEVWQDQERTVKRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEAIEDMCLMAMGRSSEVKHALLKKLKTIKKLVRFIQESGDRQWANRLRMLDGKDPQALLSELREIQRKQVHPREADTLLSTVHKAKGLEFDTVVLADDFIEVDDIRWTTGPCPQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSLRAFLLVTGAWNSVSLRGVAGRRTPGDGSSSSSPMDEARSSSSHCNLCGRHADAGGGGNRVDLLSRAQAADAQQLATSGRAFANTLITANQRAGGGGLLYAESGSLRPLCXXXVEGVGG 1292
BLAST of mRNA_Ecto-sp13_S_contig6143.16830.1 vs. uniprot
Match: A0A813FWF8_POLGL (DNA helicase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FWF8_POLGL) HSP 1 Score: 242 bits (617), Expect = 7.740e-69 Identity = 187/495 (37.78%), Postives = 255/495 (51.52%), Query Frame = 1
Query: 1 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKL-KPDLRESD-VQAFLKDRLGKDGGASTQPPPPGPARKLRR--RAPSPLED-----ATVLEWAAMAWTEMQSTGPPGG------------------AGWXXXXXXXXAAASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLK--RVE-----GGKIRH-LTQVFRFDQSIAHVANSLVGPLKGETRPLLGCAGKQGKVVLAGG-TGLDVWQDQERTLKRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEAVEDMCLMAMGRSEEVKHALLKKLKTIKKLVRFIQESGDRQWANRLRMLDGKDPQALLSELREIQ------RKQVHPREADTLLSTVHKAKGLEFDTVVLADDFIEVDDIRWTTEPC----------PQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSL 1329
FNVSVREEA++ FP +V CK VHQLA+ G RF KL DLR D V L D L A G +R+ A LE AT+ + A E+ P A + + MTH GYLKL+ LS+P L YD+++LDEAQD NP IAS+V ++ CARILVGD HQAIYGF+GA+D LK RV+ G IR LT+ FRF +A +AN ++ GE RP+LGC +G ++ GG TG V Q RP AF+ART ++++ A+ G + WVGG + Y L + D+CL++MG+ + V+ +K ++ + F + DR+ R ++ + LL L I+ K + AD LSTVHKAKGLE+DTVV+ADDF+++ T E P W + + E+N+LYVA+TR KRRL + SL
Sbjct: 55 FNVSVREEAQRGFPKNVTCKSVHQLAYASCGYRFGHKLCSDDLRAEDMVSKSLFDPLASTAAAGAHSGRKGTSRRQEGGGTAMQRLEGVEACLATLRGFLNSADGEVSEKHLPSSRPGILVEGSISEDLVCDLAKELWRRMCDPKDSEVRMTHGGYLKLYSLSKPRL--KYDLVLLDEAQDCNPAIASVVTSQS-CARILVGDEHQAIYGFLGAQDMLKDQRVQAQGSCGAVIRRQLTRSFRFGPHVADLANFVLRSFVGEARPVLGCGSHEGDILPPGGDTGEGVPQ-------RPFAFIARTNTSILKQALRCDEMGWSLEWVGGVKGYKLGLLRDLCLLSMGQRDRVESGRIKAFPSLAAVQNFARRVEDRELVARTELVLRSNAADLLQRLERIEAAAERREKACVAQAADVALSTVHKAKGLEWDTVVVADDFLDL-----TAEASRVGLSGSGLTESPTWPGDVQ--ELNMLYVALTRCKRRLQLPGSL 532
BLAST of mRNA_Ecto-sp13_S_contig6143.16830.1 vs. uniprot
Match: A0A813DDB3_POLGL (DNA helicase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DDB3_POLGL) HSP 1 Score: 244 bits (622), Expect = 6.180e-68 Identity = 187/511 (36.59%), Postives = 256/511 (50.10%), Query Frame = 1
Query: 1 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKL-KPDLRESD-VQAFLKDRLGKDGGASTQPPPPGPARK--------------------LR------------RRAPSP---------LEDATVLEWAAMAWTEMQSTGPPGGAGWXXXXXXXXAAASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLK--RVE-----GGKIRH-LTQVFRFDQSIAHVANSLVGPLKGETRPLLGCAGKQGKVVLAGG-TGLDVWQDQERTLKRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEAVEDMCLMAMGRSEEVKHALLKKLKTIKKLVRFIQESGDRQWANRLRMLDGKDPQALLSELREIQ------RKQVHPREADTLLSTVHKAKGLEFDTVVLADDFIEVDDIRWTTEPC----------PQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSL 1329
FNVSVREEA++ FP +V CK VHQLA+ G RF KL DLR D V L D L A G +R+ LR + PSP + + V + A W M + + MTH GYLKL+ LS+P L YD+++LDEAQD NP IAS+V ++ CARILVGD HQAIYGF+GA+D LK RV+ G IR LT+ FRF +A +AN ++ GE RP+LGC +G ++ GG TG V Q RP AF+ART ++++ A+ G + WVGG + Y L + D+CL++MG+ + V+ +K ++ + F + DR+ R ++ + LL L I+ K + AD LSTVHKAKGLE+DTVV+ADDF+++ T E P W + + E+N+LYVA+TR KRRL + SL
Sbjct: 234 FNVSVREEAQRGFPKNVTCKSVHQLAYASCGYRFGHKLCSDDLRAEDMVSKSLFDPLASTAAAGAHSGRKGTSRRQEGGGTAMQRLEGVEACLATLRGFLNSADGEVSEKHLPSPRPGILVEGSISEDLVCDLAKELWRRM----------------CDPKDSEVRMTHGGYLKLYSLSKPRL--KYDLVLLDEAQDCNPAIASVVTSQS-CARILVGDEHQAIYGFLGAQDMLKDQRVQAQGSCGAVIRRQLTRSFRFGPHVADLANFVLRSFVGEARPVLGCGSHEGDILPPGGDTGEGVPQ-------RPFAFIARTNTSILKQALRCDEMGWSLEWVGGVKGYKLGLLRDLCLLSMGQRDRVESGRIKAFPSLAAVQNFARRVEDRELVARTELVLRSNAADLLQRLERIEAAAERREKACVAQAADVALSTVHKAKGLEWDTVVVADDFLDL-----TAEASRVGLSGSGLTESPTWPGDVQ--ELNMLYVALTRCKRRLQLPGSL 711
BLAST of mRNA_Ecto-sp13_S_contig6143.16830.1 vs. uniprot
Match: A0A7S4TAX2_9DINO (DNA helicase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4TAX2_9DINO) HSP 1 Score: 245 bits (625), Expect = 1.910e-67 Identity = 184/509 (36.15%), Postives = 258/509 (50.69%), Query Frame = 1
Query: 1 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKLKPDLRESDVQA------FLKDRLGKDGGASTQPPPPGPARKLR----------------------RRAPSPLE---------DATVLEWAAMAWTEMQSTGPPGGAGWXXXXXXXXAAASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLKR-------VEGG------KI--RHLTQVFRFDQSIAHVANSLVGPLKGETRPLLGCAGKQGKVVLAGGTGLDVWQDQ--ERTLKRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEAVEDMCLMAMGRSEEVKHALLKKLKTIKKLVRFIQESGDRQWANRLRMLDGKDPQALLSELREIQRK-QVHPREADTL-----------------LSTVHKAKGLEFDTVVLADDFIEVDDIRWTTEPCPQPVWDSEAEKEEVNILYVAVTRAKRRL 1311
FNVSVREEA++TFP +V C+ HQLAF G +++SKLK DLR D+ A L R K G A + A++L PSPL + + E + W MQ + MTH GYLKL+ LS+P L YDV++LDEAQD NP IA IV+ ++ CAR+LVGD HQAIYGF+GA+D L +GG K+ R LT+ FRF +IA VAN ++ LKGETRPL+GC +G+++ + Q + P A++ART + ++ A+ A + G +AWVGG + Y L + D+CL+A+G E V+ A ++ ++++ L F + DR+ R+ ++ P ALL L +QR + R A T L+TVHKAKGLE+DTVV+ +DF +D+ P S +E+N LYVA+TRAKR L
Sbjct: 388 FNVSVREEAQRTFPSNVTCRNAHQLAFSAFGFKYRSKLKDDLRAEDLLASTALDELLLRRREKRGEAGEEA-----AQRLEVAEVCLATLQNFLNSAAPTVSEEHMPSPLPRMIREGLLTEEALCEAVGVLWARMQDL----------------REDVVKMTHGGYLKLYSLSKPKLA--YDVVLLDEAQDCNPAIADIVMSQS-CARLLVGDKHQAIYGFLGAQDALSAGGRGGDCSDGGAPSAKDKVFRRQLTRCFRFGSNIADVANFVLSSLKGETRPLIGCGKHEGRLLPEPEPEESPARPQPIQGCPAPPFAYVARTNAAVIDMALRADAVGLDLAWVGGVKGYGLGLLRDLCLLALGERERVESARVRNFRSLEALRAFARRVDDREALARIEIVRRHQPDALLDRLERLQRAAERRERSAGTSAAAAATVTSFRGTAAISLATVHKAKGLEWDTVVVGEDFASPEDLAQEG-----PGGLSLPLVQEINALYVALTRAKREL 867
BLAST of mRNA_Ecto-sp13_S_contig6143.16830.1 vs. uniprot
Match: A0A813J487_POLGL (DNA helicase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J487_POLGL) HSP 1 Score: 242 bits (617), Expect = 1.250e-65 Identity = 187/495 (37.78%), Postives = 255/495 (51.52%), Query Frame = 1
Query: 1 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKL-KPDLRESD-VQAFLKDRLGKDGGASTQPPPPGPARKLRR--RAPSPLED-----ATVLEWAAMAWTEMQSTGPPGG------------------AGWXXXXXXXXAAASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLK--RVE-----GGKIRH-LTQVFRFDQSIAHVANSLVGPLKGETRPLLGCAGKQGKVVLAGG-TGLDVWQDQERTLKRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEAVEDMCLMAMGRSEEVKHALLKKLKTIKKLVRFIQESGDRQWANRLRMLDGKDPQALLSELREIQ------RKQVHPREADTLLSTVHKAKGLEFDTVVLADDFIEVDDIRWTTEPC----------PQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSL 1329
FNVSVREEA++ FP +V CK VHQLA+ G RF KL DLR D V L D L A G +R+ A LE AT+ + A E+ P A + + MTH GYLKL+ LS+P L YD+++LDEAQD NP IAS+V ++ CARILVGD HQAIYGF+GA+D LK RV+ G IR LT+ FRF +A +AN ++ GE RP+LGC +G ++ GG TG V Q RP AF+ART ++++ A+ G + WVGG + Y L + D+CL++MG+ + V+ +K ++ + F + DR+ R ++ + LL L I+ K + AD LSTVHKAKGLE+DTVV+ADDF+++ T E P W + + E+N+LYVA+TR KRRL + SL
Sbjct: 655 FNVSVREEAQRGFPKNVTCKSVHQLAYASCGYRFGHKLCSDDLRAEDMVSKSLFDPLASTAAAGAHSGRKGTSRRQEGGGTAMQRLEGVEACLATLRGFLNSADGEVSEKHLPSSRPGILVEGSISEDLVCDLAKELWRRMCDPKDSEVRMTHGGYLKLYSLSKPRL--KYDLVLLDEAQDCNPAIASVVTSQS-CARILVGDEHQAIYGFLGAQDMLKDQRVQAQGSCGAVIRRQLTRSFRFGPHVADLANFVLRSFVGEARPVLGCGSHEGDILPPGGDTGEGVPQ-------RPFAFIARTNTSILKQALRCDEMGWSLEWVGGVKGYKLGLLRDLCLLSMGQRDRVESGRIKAFPSLAAVQNFARRVEDRELVARTELVLRSNAADLLQRLERIEAAAERREKACVAQAADVALSTVHKAKGLEWDTVVVADDFLDL-----TAEASRVGLSGSGLTESPTWPGDVQ--ELNMLYVALTRCKRRLQLPGSL 1132
BLAST of mRNA_Ecto-sp13_S_contig6143.16830.1 vs. uniprot
Match: A0A355QDF8_9DELT (DNA helicase n=5 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A355QDF8_9DELT) HSP 1 Score: 202 bits (513), Expect = 5.800e-55 Identity = 162/461 (35.14%), Postives = 228/461 (49.46%), Query Frame = 1
Query: 1 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKLKPDLR-----------ESDVQAFLKDRLGKDGGASTQPPPPGPARKLRRRAPSPLEDATVLEWAAMAWTEMQSTGPPGGAGWXXXXXXXXAAASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLKRVEGGKIRHLTQVFRFDQSIAHVANSLVGPLKGETRPLLGCAGKQGKVVLAGGTGLDVWQDQERTLKRPIAFLARTVSTLV-HAAMWARSRGEKVAWVGGAQAYSLEAVEDMCLMAMGRSEEVKHALLKKLKTIKKLVRFIQESGDRQWANRLRMLDGKDPQALLSEL-REIQRKQVHPREADTLLSTVHKAKGLEFDTVVLADDF-IEVDDIRWTTEPCPQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSLRTFL 1341
FN SV++EAE+ FP +V C+ +H LA+R G RF+ KL +R + +V F+ D L ++ + R P ++ A W M + M H GYLKLFQLS+P L Y +I+LDEAQD+NP A ++L++T CA+I+VGD HQAIY F GA D L +V R+LTQ FRF +IA A S++ K E+ + G + R P A+LART + L A + R K +VGG Q Y L + + + GR +EV+ + LK + + L + + D +W R R+++ Q ++ EL E+ + V EA+ L STVHKAKGLEF V LADDF + V + R P P+ E EEVN++YVA TRA RL NS L++FL
Sbjct: 52 FNKSVQQEAEQRFPTNVHCRTIHSLAWRSEGLRFRHKLVNQIRANQVMDWLNLDQHEVARFVIDTLQNFLVSADPRLHSAHVPTIARTHFGPKHLPDFVQQARELWVRMSDP-----------------QHEVPMLHDGYLKLFQLSKPEL--PYHIILLDEAQDTNPVTAQLLLQQT-CAKIMVGDPHQAIYQFRGAIDVLSKVPVNATRYLTQSFRFGPTIAQAATSVLRQFKAESNAI---------------RGAEKTDQLGRVQGSPFAYLARTNAALFDQATQYLGLR--KFGFVGGVQGYQLPVITETWKLFEGRKKEVRDSYLKTFSSYEALRNYATQVEDFEWLGRCRLVE--KHQGMIPELVEEMLEQSVAQEEAEVLFSTVHKAKGLEFAQVFLADDFPVLVREGR----PLPR----EELATEEVNMIYVAATRAIDRLQPNSRLQSFL 465
BLAST of mRNA_Ecto-sp13_S_contig6143.16830.1 vs. uniprot
Match: A0A6Y1RCG8_SALDZ (DNA helicase n=225 Tax=Enterobacterales TaxID=91347 RepID=A0A6Y1RCG8_SALDZ) HSP 1 Score: 195 bits (495), Expect = 4.060e-52 Identity = 155/457 (33.92%), Postives = 232/457 (50.77%), Query Frame = 1
Query: 1 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKLKPDLRESDVQAFLKDR---------LGKDGGASTQPPPPGPARKLRRRAPSPLEDATVLEWAAMAWTEMQSTGPPGGAGWXXXXXXXXAAASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLKR--VEGGKIRHLTQVFRFDQSIAHVANSLVGPLKGETRPLLGCAGKQGKVVLAGGTGLDVWQDQERTLKRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEAVEDMCLMAMGRSEEVKH-ALLKKLKTIKKLVRFIQESGDRQWANRLRMLDGKDPQAL-LSELREIQRKQVHPREADTLLSTVHKAKGLEFDTVVLADDFIEVDDIRWTTEPCPQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSLR 1332
+N +VR+EAE+ FP +V CK HQLA+ GR ++++L LR +DV L R + + PG A + + + +L+ + W EM P G S +TH YLKLFQLS P L R +D I+ DEAQD+NP +++VL ++ C ILVGD +Q IY F GA+D L + LTQ FRF S+A +AN L+ GETR + G G+ VL TG D + P L+RTV+ ++ A+ A G KV WVGG + Y EA+ED+ + E+++ AL + + + R + + D + +R+LD P + L LRE ++AD +ST H++KGLE+ V+L +DF ++ D P+ + ++E N+ YVAVTRA++ LV+NS +R
Sbjct: 51 YNRAVRDEAERKFPFNVECKTSHQLAWSRFGRHYRNRLIASLRITDVARKLNTRHWLLVRLALSSLNQFLCSADKEPGLQHLPDEDARAGTDVSAILQAVQVLWHEMSC--PDG---------------SFPVTHDTYLKLFQLSFPDLSRRWDTILFDEAQDANPVTSALVLSQS-CRVILVGDRYQQIYRFRGADDALSHPVLNDADRLWLTQSFRFGPSVARMANLLL-QRAGETRQVTGSGGED--EVLMSRTGADKPEG-------PRTVLSRTVAGVICTALMASLSGRKVYWVGGIEGYRTEALEDLYWFSADMPEKMQSDALRRDYRDFDEYCRIAKSTRDVEMNQAIRLLDICFPLPVKLKLLRE--HTVTSEKDADITVSTAHRSKGLEWPVVILDEDFADITD----------PLMPEDERRDETNLFYVAVTRARKTLVLNSLMR 467
BLAST of mRNA_Ecto-sp13_S_contig6143.16830.1 vs. uniprot
Match: A0A095SFC7_9GAMM (DNA helicase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A095SFC7_9GAMM) HSP 1 Score: 193 bits (491), Expect = 1.640e-51 Identity = 162/470 (34.47%), Postives = 231/470 (49.15%), Query Frame = 1
Query: 1 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKLKPDLRESDVQAFLKD---RLGKDGG-------ASTQPP--------PPGPARKLRRRAPSPLEDATVLEWAAMAWTEMQSTGPPGGAGWXXXXXXXXAAASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLKR--VEGGKIRHLTQVFRFDQSIAHVANSLVGPLKGETRPLLGCAGKQGKVV--LAGGTGLDVWQDQERTLKRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEAVEDMCLMAMGRSEEVKHA-LLKKLKTIKKLVRFIQESGDRQWANRLRMLDGKDPQALLSELREIQRKQVHPREADTLLSTVHKAKGLEFDTVVLADDFIEVDDIRWTTEPCPQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSLRTFL 1341
FN ++R+EA FP +V CK HQ+AF +GR++ KLK +LR +D+ L L KD AS P K R + + VL+ A M W M S +TH YLKL+QLS P L R Y I+ DEAQDSNP IVL++ +C I VGD HQ IY F GA + L+ + +LT FRF +A VAN+L+ LK ET+P++G G Q +VV L GTG L+RTV ++ A+ A G+++ WVGG +AY L +ED+ A +++ V++ LLK+ + + + + D + + +L+ D L L +++ P AD +ST H+ KGLE+ VVLADDF +V D P + E ++EVN+LYVA TRA + LV+N S+ L
Sbjct: 58 FNRAIRDEALSKFPANVDCKTSHQIAFSAIGRQYGHKLKNNLRLTDIAQALPSPNWTLAKDISEALNAFLASADPRILDVHFCRSERVQGKTRNQV---MYQGQVLDGAQMIWQRM-----------------IDIEDSFPITHDAYLKLYQLSLPNLARKYTTILFDEAQDSNPVTNHIVLQQ-KCKVIYVGDDHQQIYRFRGASNALQAPFLSNADTLYLTHSFRFGPQVAMVANALL-MLKKETKPVIG-RGSQDQVVTSLPEGTG-------------GFTVLSRTVIGVITNALVAAMSGKRIYWVGGIEAYQLAELEDLFWFARRQNDRVRNQKLLKEYRDFEDYEDIAKATKDPEMFRSIALLNDFDDIPGLIALM-LEQTVTDPANADITVSTAHRCKGLEWQCVVLADDFPDVFD----------PELEPEDREDEVNLLYVACTRAMQTLVINQSVALIL 480
BLAST of mRNA_Ecto-sp13_S_contig6143.16830.1 vs. uniprot
Match: A0A0C2MY91_THEKT (DNA helicase n=13 Tax=cellular organisms TaxID=131567 RepID=A0A0C2MY91_THEKT) HSP 1 Score: 190 bits (482), Expect = 5.860e-51 Identity = 149/457 (32.60%), Postives = 232/457 (50.77%), Query Frame = 1
Query: 1 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKLKPDLRESDVQAFLKDR---LGKDGGAS------TQPPPPGPARKLRRRAPSPLEDATVLEWAAMAWTEMQSTGPPGGAGWXXXXXXXXAAASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLKRVE--GGKIRHLTQVFRFDQSIAHVANSLVGPLKGETRPLLGCAGKQGKVVLAGGTGLDVWQDQERTLKRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEAVEDMCLMAMGRSEEVKHALLKK-LKTIKKLVRFIQESGDRQWANRLRMLDGKDPQALLSELREIQRKQVHPR-EADTLLSTVHKAKGLEFDTVVLADDFIEVDDIRWTTEPCPQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSLR 1332
+N ++R+EAE+ FP +V CK HQLA+ GR FQ +L LR +DV L R L K S + P A L+ +L + W EM S+ + +TH YLKLFQLS P L +D+I+ DEAQD+NP + VL + RC+ ILVGD +Q IY F GAE+ L E LT FRF ++A VAN+L+ GE R + GC G + +D E ++RT++ ++ AA+ A G++V W+GG + Y +E +ED+ ++ E ++ +LL K + ++ + + D +++L+ P L +L ++R+ H EAD + T H++KGLE+DTVVL DDF ++++ P+ +E ++E+N+LYVA TRA++ L++N +R
Sbjct: 6 YNRAIRDEAERRFPFNVECKTSHQLAWSQFGRFFQHRLTTSLRITDVAKLLNSRYWPLAKACLTSLNNFLYSADLAPSLAHLPGENDRCGLDAGKILGAVQVLWREMSSSD-----------------SRFPVTHDTYLKLFQLSTPDLSLKWDLILFDEAQDANPVTSHFVLNQ-RCSVILVGDQYQQIYRFRGAENALNAAELVDADRLWLTNSFRFGPAVAEVANALLREA-GEQRKVTGCGGDD-------SVADTLPEDAEHH-----CVISRTIAGVIGAALTASLAGKRVFWIGGIEGYRVEDLEDLYWFSVDMPERMQTSLLTKDYRDFEEYKAIAKATEDADMGQAIKLLEMYFP--LPQKLVILKRQTAHNESEADLTVVTAHRSKGLEWDTVVLNDDFNDINN----------PLISAEDRRDEINLLYVAATRARKMLILNEIVR 419
BLAST of mRNA_Ecto-sp13_S_contig6143.16830.1 vs. uniprot
Match: UPI00096A8533 (UvrD-helicase domain-containing protein n=1 Tax=Halomonas massiliensis TaxID=1816686 RepID=UPI00096A8533) HSP 1 Score: 191 bits (484), Expect = 1.300e-50 Identity = 143/463 (30.89%), Postives = 237/463 (51.19%), Query Frame = 1
Query: 1 FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKLKPDLRESDVQAFLKD---RLGKDGGASTQPPPPGPARKLRRR-------APSPLED--ATVLEWAAMAWTEMQSTGPPGGAGWXXXXXXXXAAASLGMTHAGYLKLFQLSRPCLGRTYDVIMLDEAQDSNPCIASIVLRETRCARILVGDSHQAIYGFIGAEDHLK--RVEGGKIRHLTQVFRFDQSIAHVANSLVGPLKGETRPLLGCAGKQGKVVLAGGTGLDVWQDQERTLKRPIAFLARTVSTLVHAAMWARSRGEKVAWVGGAQAYSLEAVEDMCLMAMGRSEEVKHA-LLKKLKTIKKLVRFIQESGDRQWANRLRMLDGK---DPQALLSELREIQRKQVHPREADTLLSTVHKAKGLEFDTVVLADDFIEV-DDIRWTTEPCPQPVWDSEAEKEEVNILYVAVTRAKRRLVVNSSLR 1332
+N ++RE+A+ FP +V CK HQLA+ +G+ ++ KL P+LR D+ + L +D A+ + + R A S +D A V+ A W M + MTH GY KL+QLS+P L YD+++LDEAQDSNPC +IV+ + RC +L GD +QAIY + GA+D + RV+ K+ + FRF + I+ AN+L+ L+GE PL G + +Q V+ + + +Q ++ + + + FLART+ ++ A+ R V VGG +Y L +ED+ ++ + + +++ LL+ + +E+ D + +++LD D + + E +R P +AD +++T H+AKGLE++ V L DDF ++ DD+ D E+N++YVA TRAK L +N+ L+
Sbjct: 51 YNRAIREDAQARFPSNVTCKTTHQLAYAAIGKDYRHKLSPNLRLRDITDAVNTFDWSLAQDIRATIHAFAISADKTIDRHHWPISLDATSKAKDRQAIVIHHAKRLWKAMCDV----------------ENREVSMTHDGYFKLYQLSQPDLSSRYDIVLLDEAQDSNPCAEAIVIDQPRCRVLLAGDPYQAIYQWRGAQDAMASHRVKDAKVMRIATSFRFGERISATANALLA-LRGEKVPLRGLSQRQDCVIPS-----NQFQLKQSPVPQ-VTFLARTMMGVMQTALHFSRRKLSVHLVGGGDSYPLADMEDLFWLSRNKRDHIRNKQLLRDFNDFTQYKAIAEETKDPEMLRAIKVLDTYPHFDQEMKMLE----KRLSASPDDADIVVTTAHRAKGLEWECVYLVDDFPDLFDDL------------DPAERDAEINLMYVAATRAKTLLAINTQLQ 474 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6143.16830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6143.16830.1 >prot_Ecto-sp13_S_contig6143.16830.1 ID=prot_Ecto-sp13_S_contig6143.16830.1|Name=mRNA_Ecto-sp13_S_contig6143.16830.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=561bp FNVSVREEAEKTFPPHVACKGVHQLAFRFVGRRFQSKLKPDLRESDVQAFback to top mRNA from alignment at Ecto-sp13_S_contig6143:2..7922- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6143.16830.1 ID=mRNA_Ecto-sp13_S_contig6143.16830.1|Name=mRNA_Ecto-sp13_S_contig6143.16830.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7921bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6143:2..7922- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6143:2..7922- >mRNA_Ecto-sp13_S_contig6143.16830.1 ID=mRNA_Ecto-sp13_S_contig6143.16830.1|Name=mRNA_Ecto-sp13_S_contig6143.16830.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1683bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6143:2..7922- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |