prot_Ecto-sp13_S_contig6137.16824.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6137.16824.1
Unique Nameprot_Ecto-sp13_S_contig6137.16824.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length621
Homology
BLAST of mRNA_Ecto-sp13_S_contig6137.16824.1 vs. uniprot
Match: D8LFZ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFZ4_ECTSI)

HSP 1 Score: 1071 bits (2769), Expect = 0.000e+0
Identity = 550/617 (89.14%), Postives = 556/617 (90.11%), Query Frame = 0
Query:    5 KAWVAGFSNLMDELRLFMSGRHAPFRLNSLRAVFVTPEDDXXXXXXQGGNPGADGEDRQGDQTKQPMEDSLSILWEVVSALHDSGWNEDDLPWATPRVWKTPTAEPRLSNLSSLSLPDDFVTSDTIPAELAGMGPCEMAACAGVGVGTTSPADRPDWSYALGIMGERDLFDEDDGVGPASCCSELLPKKERVVLVEYCKDILACFQPVCRADGTKVGKWAMLVDQLVSVRDSAPSGCQVAYLITEVLFLAMLQLPAVEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEALWPLLPLDPTPVCPYLDGATGIPASLQRIAADLSSRVSSREDVEDLQAWLDGDHALDDAATQGXXXXXXXXXXXADGDTAEQAPIDPCWRSNMLIQVLLRGGQASPTHTFVYLDRYRSYLRALSRNQALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMSKAISLYTDRVTLSLGELRDLEKSAKALDEAIDERLKNRSPVSPTTEEGNDNAPVADPQ 621
            +AWVAGFSNLMDELRLFMSGRHAPFRLNSLRAVFVTPEDD XXXXX GGNPGADGEDRQGDQ KQPMEDSLSILWEVVSALHDSGWNEDDLP ATPRVWKTPTAEPRLSNLSSLSLPDDFVTSDTIPAEL GMGPCEMAACAGV VGTTSPADRPDWSYALGIMGERDLFDEDDGVGPASCC ELLPKKERVVLVEYCKDILACFQPVCRADGTKVGKWAMLVDQLVS+RDSAPSGCQVAYLITEVLFLAMLQLPA EHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEALWPLLPLDPTPVCPYLDGATGIPASLQRIAADLSSRVSSREDVEDLQ                                                 VLLRGGQASPTHTFVYLDRYRSYLR L R++ALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMSKAISLYTDRVTLSLGELRDLEKSAKALDEAIDERLKNRSPV P+TEEG+DNAP ADPQ
Sbjct:  228 EAWVAGFSNLMDELRLFMSGRHAPFRLNSLRAVFVTPEDDEXXXXXXGGNPGADGEDRQGDQPKQPMEDSLSILWEVVSALHDSGWNEDDLPRATPRVWKTPTAEPRLSNLSSLSLPDDFVTSDTIPAELTGMGPCEMAACAGVDVGTTSPADRPDWSYALGIMGERDLFDEDDGVGPASCCPELLPKKERVVLVEYCKDILACFQPVCRADGTKVGKWAMLVDQLVSIRDSAPSGCQVAYLITEVLFLAMLQLPAAEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEALWPLLPLDPTPVCPYLDGATGIPASLQRIAADLSSRVSSREDVEDLQ-------------------------------------------------VLLRGGQASPTHTFVYLDRYRSYLRTLRRDEALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMSKAISLYTDRVTLSLGELRDLEKSAKALDEAIDERLKNRSPV-PSTEEGDDNAPPADPQ 794          
BLAST of mRNA_Ecto-sp13_S_contig6137.16824.1 vs. uniprot
Match: A0A836C9J1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9J1_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.230e-62
Identity = 172/585 (29.40%), Postives = 260/585 (44.44%), Query Frame = 0
Query:   14 LMDELRLFMSGRHAPFRLNSLRAVFVTPEDDXXXXXXQGGNPGADGEDRQGDQTKQPMEDSLSILWEVVSALHDSGWNEDDLPWATPRVWKTPTAEPRLSNLSSLSLPDDFVTSDTIPAELAGMGPCEMAACAGVGVGTTSPADRPD----------WSYALGIMGERDLFDEDDGVGPASCCSELLPKKERVVLVEYCKDILACFQPVCRADGTKVGKWAMLVDQLVSVRDSAPSGCQVAYLITEVLFLAMLQLPAVEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEALWPLLPLDPTPVCPY---------LDGATGIPASLQRIAADLSSRVSSREDVEDLQAWLDGDHALDDAATQGXXXXXXXXXXXADGDTAEQAPIDPCWRSNMLIQVLLRGGQASPTHTFVYLDRYRSYLRALSRNQALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMSKAISLYTDRVTLSLGE 579
            LM+++   M+ R   F    LRA+F   E++ XXXXX           +Q     +P+ DS++ LW+  + + D+                       ++ + +L LP   ++ + +PA +  MGP    AC  +  G  +    P+          ++Y LG  GE +LF E  G G A C    LP  +R++L EY K+++  FQP    DGT VGK   L  QL+++   AP      Y++ E L   ++ LP   H+    HRT+LELCR+ P E   A+S  TG L+ EL R+D     +   WFA+HLK+TE+KWPFW+HW  V++ Q D+ QR+FV   L  LV+LSY DRIK  LPEA+W LLP  P+ + PY            A  +PAS+  +   L   V+++E  ++L  W +   +  DAA               D + A  A     W +  L   +L  G  S                                            Q      + LL  G +SP  VV + F   N + +     LWE++  A+ L  D V +++ +
Sbjct:  221 LMEKIGTHMARRSPLFEKRGLRAIFYVGEEEDXXXXXXXXXXXXXXXXQQA----EPLTDSMAALWDEETTVADA-----------------------IAAVVALPLPTHVLSMEGVPALVKRMGPFAATACMQIKEGARAFRAHPEDHVTPSHSLAYAYTLGAFGEFELFHEGSGGGAALCAQ--LPTLQRLLLREYVKEVITAFQPRINGDGTSVGKHEALAAQLLAIGKVAPREEAGVYIVVETLLQMVISLPQPPHMTAMLHRTLLELCRLAPNEVAPAISSATGALYHELPRMDFHSRRQLALWFANHLKDTEFKWPFWQHWAGVLQEQRDHPQRMFVEMALDMLVRLSYRDRIKNELPEAMWALLPPQPSIINPYDTPSXXXXXXTAAGELPASVLEVIQALVPMVAAKEHPDNLSQWFELQLSTIDAA---------------DAEAAGGA----AWSAAALTYAILAAGAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QTMVAATRLLLRRGAVSPEAVVTHFFAPANVDKLGWYAPLWELLEAALQLALDAVEMAVAQ 756          
BLAST of mRNA_Ecto-sp13_S_contig6137.16824.1 vs. uniprot
Match: A0A2G8KM06_STIJA (Putative nuclear cap-binding protein subunit 1-like n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KM06_STIJA)

HSP 1 Score: 145 bits (365), Expect = 8.620e-33
Identity = 98/342 (28.65%), Postives = 171/342 (50.00%), Query Frame = 0
Query:  245 YLITEVLFLAMLQLPAVEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEALWPLLPLDPTPVCPYLDGATG-IPA-SLQRIAADLSSRVSSREDVEDLQAWLDGDHALDDAATQGXXXXXXXXXXXADGDTAEQAPIDPCWRSNMLIQVLLRGGQASPTHTFVYLDRYRSYLRALSRNQALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMSKAISLYTDRVTLSLGELRDLE 584
            Y+I EV+F ++  LP   +L +     +LELC++ P   P  ++  T  L++ +E ++ T   RF  WF+ HL N +++W  W  W +  E +P++A+ VF+  VL   ++LSY  R+ +TLP+   PL+P +PTPV  Y+D  T  IPA  + R   +     ++ E VE++   + G    D++                 G+  E A  +P  + ++ +Q LL  GQ S +HTF  L ++   L+ L       E +Q+ ML  +  LW++  Q  C++   L+   ++S   V+ ++F E +        F+WE++   +      VT    EL D++
Sbjct:  295 YMIIEVVFSSLFNLPDPANLEVFHASLLLELCKLQPGFLPQVLAQATEMLYERVEHMNLTCMERFIRWFSHHLSNFQFRWS-WDEWIDCTEKEPEDAKPVFIHEVLQKCLRLSYHQRLVETLPDKFEPLIPKEPTPVFRYIDEETNQIPALPISRKLIEAFKAKATMEQVEEILNQIPGPKKEDNS-----------------GEVEEAA--NPL-KIDVFVQSLLFLGQKSFSHTFSALAKFHPLLKKLGNT----EESQIFMLRTIRDLWQNHQQMICVIIDKLIRTTIVSCPAVINWIFSE-HMRVHFTEGFVWEILHGVLRKMNMEVTQLQKELEDVK 610          
BLAST of mRNA_Ecto-sp13_S_contig6137.16824.1 vs. uniprot
Match: E9HSG0_DAPPU (Nuclear cap-binding protein subunit 1 n=9 Tax=Daphnia TaxID=6668 RepID=E9HSG0_DAPPU)

HSP 1 Score: 145 bits (365), Expect = 1.100e-32
Identity = 99/347 (28.53%), Postives = 163/347 (46.97%), Query Frame = 0
Query:  245 YLITEVLFLAMLQLPAVEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEALWPLLPLDPTPVCPY-LDGATGIPASLQ-RIAADLSSRVSSREDVEDLQAWLDGDHALDDAATQGXXXXXXXXXXXADGDTAEQAPIDPCWRSNMLIQVLLRGGQASPTHTFVYLDRYRSYLRALSRNQALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMSKAISLYTDRVTLSLGELRDLEKSAKA 589
            Y+I EVLF  + Q+P+  +L I+   T++ELC++ P   P  ++  T  L++ ++ +++T   RF +WF+ HL N +++W  W  W N + L+ D+ +  FVS V    ++LSY  R+ + +PE   PLLP  P P   Y ++G  G P + Q +   +L  +  + E+V +L   L   + L D                   D  +  P        + +Q LL  G  S THTF  L +Y S  + +  N    E  Q+ ML  V +LW+H PQ+  +V   +L   ++    V  ++F  D       S ++WEV+   I      V     E+ D     +A
Sbjct:  350 YMIVEVLFSELFQMPSPRYLEIAYGCTLIELCKLQPSTMPQVLAQATELLYERIDTMNATCFDRFVSWFSYHLSNFQFRWS-WDDWQNCLSLEKDHPKAKFVSEVFGKCLRLSYHKRVTEMVPECYSPLLPPKPEPYFKYQIEGGNGFPGAAQVQTLTELLRKKPTPEEVLELVQQLP--NPLKD-------------------DDGDMEPSHNPLAIEVFVQTLLHLGSKSFTHTFAGLAKYHSVFKNICEN----EEAQICMLRQVYELWQHHPQFLGVVVDKMLKTQIVECCAVANWIFSRDMALEFTRS-YIWEVLHLTIRKMNKHVVRLEKEVADARAKLRA 669          
BLAST of mRNA_Ecto-sp13_S_contig6137.16824.1 vs. uniprot
Match: A0A097PNM2_ACOCL (ABH1 (Fragment) n=1 Tax=Acorus calamus TaxID=4465 RepID=A0A097PNM2_ACOCL)

HSP 1 Score: 128 bits (321), Expect = 3.230e-27
Identity = 110/409 (26.89%), Postives = 176/409 (43.03%), Query Frame = 0
Query:  187 SELLPKKERVVLVEYCKDILACFQPVCRADGTKVGKWAMLVDQLVSVRDSAPSGCQVAYLITEVLFLAMLQLPAVEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEA--LWPLLPLDPTPVCPYLDGATGIPASLQRIAADLSSRVSSREDVEDLQAWLDGDHALDDAATQGXXXXXXXXXXXADGDTAEQAPIDPCWRSNMLIQVLLRGGQASPTHTFVYLDRYRSYLRALSRNQALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMSKAISLYTDRVTLSLGELRDLEKSAKALDEA 593
            SE+ P  +R V+ EY  D+L  F   CR +                   S P   +  YL+ E +F  +L LP      I     I++LC+ +P   PA V+     LFD +  LD    +R   WF+ HL N ++ WP W+ W  V++L     +RVFV  VL   V+LSY ++IK+++  A  L  LLPL       Y DG        Q ++ DL+S V  +  V ++  W+                              E+  +       ++IQ LL  G  S TH    ++RY + +  +  +Q      QV ++D V   W+ + Q   +    ++   ++S   +VY+VF   +      S   WE++  AIS   +R++    E+  L++S  A  EA
Sbjct:  261 SEMQPI-DRFVVEEYLLDVLLFFNG-CRKE-------------CALYMASLPVPFRYEYLMAETIFSQLLLLPRAPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFDRIADLDMECRTRLILWFSHHLANFQFTWP-WEEWAYVIDLPKWAPKRVFVQEVLEREVRLSYWEKIKQSIENAVGLDELLPLKGGSNFKYEDG--------QELSKDLNSMVKGKVTVHEIVLWV------------------------------EEKVVAVHGALEVVIQTLLDIGSKSFTHLITVMERYGNVIAKMCPDQE----KQVMLIDEVNSYWKDNTQMTAIAIDRMMGYRLVSNLAIVYWVFSPSSMQQFHTSDRPWEILRNAISKTYNRISDLRKEIYSLKRSVLAAKEA 611          
BLAST of mRNA_Ecto-sp13_S_contig6137.16824.1 vs. uniprot
Match: A0A0B7B8Y4_9EUPU (MIF4G domain-containing protein n=2 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7B8Y4_9EUPU)

HSP 1 Score: 124 bits (312), Expect = 4.590e-26
Identity = 90/348 (25.86%), Postives = 165/348 (47.41%), Query Frame = 0
Query:  245 YLITEVLFLAMLQLPAVEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEALWPLLPLDPTPVCPY-LDGATGIPASLQRIAADLSSRVSSREDVEDLQAWLDGDHALDDAATQGXXXXXXXXXXXADGDTAEQAPIDPCWRSNMLIQVLLRGGQASPTHTFVYLDRYRSYLRALSRNQALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMS---KAISLYTDRVTLSLGELRDLEKSAK 588
            ++I EV+F  M QLP   ++ +    T +ELC++ P   P A++  +  LFD ++ + +    RF  WF+ HL N +YKW  W  W   V + P+  +  FV  VL   ++ SY  R+ +++P +  PLLP DP P+  Y  +GA  +P ++   A  L S + S+   E+    L                         +G   E +  +P  + ++    LL  G  S +H+F  L ++   L++L+      +  +V +L  + + W+++ Q   L+   LL   V+  ++V  ++F  +  +    S ++WE+M    K +S + D++   +    DL ++AK
Sbjct:  354 FMIVEVMFGQMFQLPRSPYIDLFYGSTFIELCKLQPTSMPEALALASEMLFDRIDTMHTICIERFVQWFSYHLSNFQYKWS-WDDWATCVNMDPNAPKSKFVREVLLKCLRFSYHQRVAESVPASFAPLLPPDPKPIYRYEQEGAGPLPGTMH--AHKLISTIKSKCTPEEAAIML-----------------KDLPNVYPNGQENENSSFNPL-KIDVFFSTLLHLGSKSISHSFAALAKFHPNLKSLAEF----DDGKVCLLKVLYETWKNNQQMMVLLVDKLLRTEVVDCSSVANWLFSFEMQHDFT-SFYVWEIMHSTIKKMSRHVDQLQQEVDSAHDLMEAAK 675          
BLAST of mRNA_Ecto-sp13_S_contig6137.16824.1 vs. uniprot
Match: S8D3A0_9LAMI (MIF4G domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8D3A0_9LAMI)

HSP 1 Score: 124 bits (312), Expect = 5.020e-26
Identity = 110/414 (26.57%), Postives = 182/414 (43.96%), Query Frame = 0
Query:  188 ELLPKKERVVLVEYCKDILACFQPVCRADGTKVGKWAMLVDQLVSVRDSAPSGCQVAYLITEVLFLAMLQLPAVEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEA--LWPLLPLDPTPVCPYL--DGATGIPASLQRIAADLSSRVSSREDVEDLQAWLDGD----HALDDAATQGXXXXXXXXXXXADGDTAEQAPIDPCWRSNMLIQVLLRGGQASPTHTFVYLDRYRSYLRALSRNQALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMSKAISLYTDRVTLSLGELRDLEKSAKALDEA 593
            +LLP  +R ++ EY  D+L  F   CR +             LV +    P   +  YL+ E +F  +L LP      +     I++LC+ +P   P+ V+     LFD++E LD    +R   WF+ HL N ++ WP W+ W  V++L     QRVFV  VL   V+LSY DRIK+++  A  L  LLP   TP   Y   DG        + ++++LS  V  +  + ++ +W++      H LD                                   +++Q LL  G  S TH    L+RY   +  +  +    E  Q+ ++  V   W+++ Q   +    ++   ++S  ++V +VF   N +   +S   WE++  A+S   +R+     EL  L+KS     EA
Sbjct:  305 DLLPI-DRFIVEEYLLDVLL-FLNGCRKE---------CASSLVGL----PVNFRYEYLMAETIFSQILMLPEPPFKPLYYTLVIMDLCKALPGAFPSVVAGAVRSLFDKIEYLDMECRNRLILWFSHHLSNFQFVWP-WEEWSYVLDLPKWAPQRVFVQEVLEREVRLSYWDRIKRSIENAPILEELLPPKGTPNFMYSSDDGDE----KERGLSSELSRMVKEKLAIREIISWIEDQVLPSHGLDVTL-------------------------------RVVVQTLLNFGSKSFTHLITVLERYGQVMAKICSD----EDKQIMLISEVRFFWKNNAQMTAICIDRMMGYRLISNVSIVRWVFSASNVDEFHVSDRPWEILGNAVSKTYNRIADLRKELPSLKKSIATATEA 663          
BLAST of mRNA_Ecto-sp13_S_contig6137.16824.1 vs. uniprot
Match: A0A7M7N7T6_STRPU (MIF4G domain-containing protein n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7N7T6_STRPU)

HSP 1 Score: 124 bits (310), Expect = 8.180e-26
Identity = 95/350 (27.14%), Postives = 164/350 (46.86%), Query Frame = 0
Query:  245 YLITEVLFLAMLQLPAVEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEALWPLLPLDPTPVCPY-LDGATGIPA-SLQRIAADLSSRVSSREDVEDLQAWLDGDHALDDAATQGXXXXXXXXXXXADGDTAEQAPIDPCWRSNMLIQVLLRGGQASPTHTFVYLDRYRSYLRALSRNQALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMSKAISLYTDRVTLSLGELRDLEKSAKALDE 592
            Y+I EV+F  +  LP    + +      LELC++ P   P  ++  +  L++ LE ++   + RF  WFA HL N +++W  W+ W + + +  D  +  FV  VLA  ++LSY  RI +++PE   PL+P  P P+  Y  +GA  +P  ++ +   DL  +  S E V ++         L DA                D D  E        + ++ +QVLL  G  S +H+F  L ++   L+ L    A+ E +Q+ +L  +  LW +  Q   ++   LL + V+S   V  ++F    +++     F+WE++   I+     V     EL +  +SAK  D+
Sbjct:  355 YVIVEVMFGQLFNLPQSPQIHVFYMALFLELCKLQPGSLPQVLAQASEMLYERLEHMNLHSSDRFVNWFAHHLSNFQFRWS-WEEWTDCLNVDVDLPKPKFVIEVLAKCLRLSYHQRIVESVPETFAPLVPNPPEPIYKYGEEGAESLPGYAIAQTLCDLIKKKGSIEVVLEV---------LKDAPNP------------KDVDGMEDETSFNALKIDVFVQVLLYLGSKSFSHSFGALAKFLPVLKEL----AVNEESQIYILRVIKDLWRNHSQRIAVLVDKLLRVRVISCPAVANWLFSSFMSSSFTRM-FVWEILHSTINTMNKHVKGCETELEEARQSAKRPDD 677          
BLAST of mRNA_Ecto-sp13_S_contig6137.16824.1 vs. uniprot
Match: NCBP1_ORYSJ (Nuclear cap-binding protein subunit 1 n=24 Tax=Oryzinae TaxID=1648021 RepID=NCBP1_ORYSJ)

HSP 1 Score: 122 bits (305), Expect = 3.760e-25
Identity = 96/361 (26.59%), Postives = 161/361 (44.60%), Query Frame = 0
Query:  236 SAPSGCQVAYLITEVLFLAMLQLPAVEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEA--LWPLLPLDPTPVCPYLDGATGIPASLQRIAADLSSRVSSREDVEDLQAWLDGDHALDDAATQGXXXXXXXXXXXADGDTAEQAPIDPC-WRSNMLIQVLLRGGQASPTHTFVYLDRYRSYLRALSRNQALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMSKAISLYTDRVTLSLGELRDLEKSAKALDEA 593
            S P   +  YL+ E +F  +L LP      I     I++LC+ +P   P+ V      LFD +  +D    +R   WF+ HL N ++ WP W+ W  V +L     QRVFV  VL   ++LSY D+IK+++ +A  L  LLP    P   Y            R++ +L + V  R+   D+ +W+D                             +  P++   +  +++ Q LL  G  S TH    L+RY   +  L  N+ +    Q+ ++D V+  W++S Q   +    ++   +LS   +V +VF   N +   +S   WE++  A+S   +R+     E++ L K  +A  EA
Sbjct:  336 SLPVPFRYEYLMAETIFSQLLLLPNPPFRPIYYTLVIIDLCKALPGAFPSVVVGAVHALFDRISNMDMECRTRLILWFSHHLSNFQFIWP-WQEWAYVKDLPKWAPQRVFVQEVLEREIRLSYFDKIKQSIEDAVELEELLPPKAGPNFRYHSDEGKESTDGHRLSKELVAMVRGRKTQGDIISWVD----------------------------EKIIPVNGAKFALDVVSQTLLDIGSKSFTHLITVLERYGQIISKLCPNEEM----QLLLMDEVSAYWKNSTQMIAIAIDRMMGYRLLSNLAIVKWVFSPANVDQFHVSDRPWEILRNAVSKTYNRIFDLRKEIQTLRKGLQAAKEA 663          
BLAST of mRNA_Ecto-sp13_S_contig6137.16824.1 vs. uniprot
Match: UPI000359F25C (nuclear cap-binding protein subunit 1-A n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359F25C)

HSP 1 Score: 120 bits (301), Expect = 1.060e-24
Identity = 91/348 (26.15%), Postives = 167/348 (47.99%), Query Frame = 0
Query:  245 YLITEVLFLAMLQLPAVEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELERLDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVLAALVKLSYTDRIKKTLPEALWPLLPLDPTPVCPY-LDGATGIPASLQRIAADLSSRVSSREDVEDLQAWLDGDHALDDAATQGXXXXXXXXXXXADGDTAEQAPIDPCWRSNMLIQVLLRGGQASPTHTFVYLDRYRSYLRALSRNQALGEANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNNAIALSPFLWEVMS---KAISLYTDRVTLSLGELRDLEKSAK 588
            Y+I EV+F  + +LP   ++ +    T +ELC++ P   P  ++  +  LF+ +E + S    RF  WF+ HL N +Y+W  W  W   VE+ P+  +  FV  VL   ++ SY  R+ +++P++  PLLP +P PV  Y  +GA  +P +    A  L S + S+    D  A L     L D   Q             +G   E    +P  + ++    LL  G  S +H+F  L ++   L++L+      +  +V +L  + + W+++ Q   ++   LL   V+  ++V  ++F  +  +    S ++WE+M    K +S + D++   + E  D +++ K
Sbjct:  356 YMIVEVMFGQLFELPRSPYIDLFYGATFIELCKLQPTSMPEVLAQASEMLFERIETMHSICIERFVMWFSYHLSNFQYRWS-WDDWAECVEMDPNAPKSKFVREVLLKCLRFSYHQRVSESVPDSFAPLLPPEPNPVYRYEQEGAGSLPGTTH--AHKLISSIKSKC-TPDEAAIL-----LKDLPNQ-----------YPNGQENENPAFNPL-KIDVFFATLLHLGSKSISHSFAALAKFHPNLKSLAEF----DDGKVCLLKVLYETWKNNQQMMVVLVDKLLRTEVVDCSSVANWLFSFEMQHDFT-SFYVWEIMHSTIKKMSRHVDQLQHEVDEAHDKQEAVK 677          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6137.16824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFZ4_ECTSI0.000e+089.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C9J1_9STRA1.230e-6229.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2G8KM06_STIJA8.620e-3328.65Putative nuclear cap-binding protein subunit 1-lik... [more]
E9HSG0_DAPPU1.100e-3228.53Nuclear cap-binding protein subunit 1 n=9 Tax=Daph... [more]
A0A097PNM2_ACOCL3.230e-2726.89ABH1 (Fragment) n=1 Tax=Acorus calamus TaxID=4465 ... [more]
A0A0B7B8Y4_9EUPU4.590e-2625.86MIF4G domain-containing protein n=2 Tax=Arion vulg... [more]
S8D3A0_9LAMI5.020e-2626.57MIF4G domain-containing protein (Fragment) n=1 Tax... [more]
A0A7M7N7T6_STRPU8.180e-2627.14MIF4G domain-containing protein n=3 Tax=Echinacea ... [more]
NCBP1_ORYSJ3.760e-2526.59Nuclear cap-binding protein subunit 1 n=24 Tax=Ory... [more]
UPI000359F25C1.060e-2426.15nuclear cap-binding protein subunit 1-A n=1 Tax=Ap... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 580..600
IPR015172MIF4G-like, type 1PFAMPF09088MIF4G_likecoord: 226..368
e-value: 2.7E-24
score: 86.0
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 393..595
e-value: 2.2E-23
score: 85.0
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 187..378
e-value: 5.7E-39
score: 135.6
IPR015174MIF4G-like, type 2PFAMPF09090MIF4G_like_2coord: 458..592
e-value: 4.5E-20
score: 72.3
IPR027159Nuclear cap-binding protein subunit 1PANTHERPTHR12412CAP BINDING PROTEINcoord: 61..598
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 377..573
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 228..375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6137contigEcto-sp13_S_contig6137:477..8037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6137.16824.1mRNA_Ecto-sp13_S_contig6137.16824.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6137 477..8037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6137.16824.1 ID=prot_Ecto-sp13_S_contig6137.16824.1|Name=mRNA_Ecto-sp13_S_contig6137.16824.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=621bp
PFVFKAWVAGFSNLMDELRLFMSGRHAPFRLNSLRAVFVTPEDDEEEEED
QGGNPGADGEDRQGDQTKQPMEDSLSILWEVVSALHDSGWNEDDLPWATP
RVWKTPTAEPRLSNLSSLSLPDDFVTSDTIPAELAGMGPCEMAACAGVGV
GTTSPADRPDWSYALGIMGERDLFDEDDGVGPASCCSELLPKKERVVLVE
YCKDILACFQPVCRADGTKVGKWAMLVDQLVSVRDSAPSGCQVAYLITEV
LFLAMLQLPAVEHLAISCHRTILELCRIVPKEAPAAVSYCTGRLFDELER
LDSTVASRFGTWFADHLKNTEYKWPFWKHWCNVVELQPDNAQRVFVSNVL
AALVKLSYTDRIKKTLPEALWPLLPLDPTPVCPYLDGATGIPASLQRIAA
DLSSRVSSREDVEDLQAWLDGDHALDDAATQGGGGGDAAAAAAADGDTAE
QAPIDPCWRSNMLIQVLLRGGQASPTHTFVYLDRYRSYLRALSRNQALGE
ANQVAMLDGVAQLWEHSPQWFCLVCKYLLDIGVLSPTTVVYYVFREDNNN
AIALSPFLWEVMSKAISLYTDRVTLSLGELRDLEKSAKALDEAIDERLKN
RSPVSPTTEEGNDNAPVADPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015172MIF4G-like_typ-1
IPR016021MIF4-like_sf
IPR015174MIF4G-like_typ-2
IPR027159CBP80
IPR016024ARM-type_fold