mRNA_Ecto-sp13_S_contig6136.16823.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig6136.16823.1
Unique Name	mRNA_Ecto-sp13_S_contig6136.16823.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot
Match: A0A6H5J7Q1_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Q1_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 3.290e-56
Identity = 107/111 (96.40%), Postives = 108/111 (97.30%), Query Frame = 1

Query:    1 QAERKRLFISREGVLASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKMKDV 333
            QAERKRLF+SREGV ASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGA VLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAK KDV
Sbjct:  135 QAERKRLFVSREGVSASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGAHVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKTKDV 245

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BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot
Match: D7FH66_ECTSI (RNA-binding S4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH66_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.720e-36
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  106 MADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKMKDV 333
            MADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAK KDV
Sbjct:    1 MADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKTKDV 76

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BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot
Match: A0A836CE46_9STRA (S4 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE46_9STRA)

HSP 1 Score: 123 bits (309), Expect = 5.790e-28
Identity = 65/112 (58.04%), Postives = 85/112 (75.89%), Query Frame = 1

Query:    1 QAERKRLFISREGV-LASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKMKDV 333
            +AER+R+F + +GV +A+ +   VVALE+GGQFLFDMADHRD+LG+I+  G+ R  +GDILVQGERGAQVL  P +A++L  +L+SVRSV VKV  +PL EL V P   K V
Sbjct:   78 EAERRRMFFAHDGVDMATSVAVGVVALEVGGQFLFDMADHRDYLGSILGTGIERQKVGDILVQGERGAQVLCHPDIADYLCTNLSSVRSVTVKVDQVPLTELKVSPPIKKHV 189

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BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot
Match: A0A1Z4JNZ0_LEPBY (RNA-binding protein S4 n=1 Tax=Leptolyngbya boryana NIES-2135 TaxID=1973484 RepID=A0A1Z4JNZ0_LEPBY)

HSP 1 Score: 121 bits (303), Expect = 2.850e-27
Identity = 62/111 (55.86%), Postives = 79/111 (71.17%), Query Frame = 1

Query:    1 QAERKRLFISREGVLASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKMKDV 333
            QAER+RL I+R  +     + E+VAL+I G FLFD A HRDFLGAI+  G+ RD +GDI+V GERGAQ +V P + EFL  +LT VRSV VK +PIP EEL +R  K K++
Sbjct:   67 QAERQRLAIARSEIPLDPSQVELVALDIAGNFLFDPATHRDFLGAILGTGIVRDKVGDIIVLGERGAQAIVTPELGEFLQTALTQVRSVPVKTQPIPFEELKIREPKKKEI 177

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BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot
Match: A0A251WKT0_9CYAN (Photosystem II S4 domain protein n=2 Tax=unclassified Alkalinema TaxID=2635015 RepID=A0A251WKT0_9CYAN)

HSP 1 Score: 121 bits (303), Expect = 2.910e-27
Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = 1

Query:    1 QAERKRLFISREGV-LASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKMKDV 333
            QAER+R+ I+R  + L  E + E+ ALEI G FLFD A HRDFLGA++  G+ RD +GDI+V GERGAQ +V P +AEFLA  LT VRSV VK RPIPL EL +R  K K++
Sbjct:   67 QAERQRVAIARSEIPLDQETQVELTALEIAGNFLFDTATHRDFLGAMLGTGIVRDKVGDIIVLGERGAQAIVVPELAEFLAMQLTQVRSVPVKTRPIPLTELKIREPKKKEL 178

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BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot
Match: K9XQ09_STAC7 (Photosystem II S4 domain protein n=2 Tax=Stanieria TaxID=102115 RepID=K9XQ09_STAC7)

HSP 1 Score: 120 bits (300), Expect = 7.260e-27
Identity = 64/111 (57.66%), Postives = 81/111 (72.97%), Query Frame = 1

Query:    1 QAERKRLFISREGVLASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKMKDV 333
            QAER+RL I+R+ +   + + ++VAL+I G FLFD A HRDFLGAI+  G+ RD +GDILV GERGAQV+V P M EFL  SLT VRSV VK + I L EL VRP + K++
Sbjct:   67 QAERQRLGIARQDIPIDQSQIDLVALDIAGNFLFDPATHRDFLGAILGTGIVRDKVGDILVLGERGAQVIVVPEMVEFLETSLTQVRSVPVKTQRIDLSELKVRPPQKKEM 177

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BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot
Match: A0A845X2R8_9CYAN (Photosystem II S4 domain protein n=1 Tax=Spirulina sp. SIO3F2 TaxID=2607816 RepID=A0A845X2R8_9CYAN)

HSP 1 Score: 120 bits (300), Expect = 7.260e-27
Identity = 62/111 (55.86%), Postives = 80/111 (72.07%), Query Frame = 1

Query:    1 QAERKRLFISREGVLASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKMKDV 333
            QAER+RL ++R  +     + E+ AL++ G FLFD A+HRDFLGAI+N GV RD +GDILV G+RGAQ+LV P + EF   SL  VRSV VKV+PI L EL +RP K K++
Sbjct:   67 QAERQRLALARTELPLETEQVELAALDVAGNFLFDAANHRDFLGAILNTGVVRDKVGDILVLGDRGAQILVVPELVEFFQQSLLQVRSVPVKVQPIELSELKIRPPKRKEI 177

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BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot
Match: B1XMP5_SYNP2 (S4 domain protein n=10 Tax=Synechococcus TaxID=1129 RepID=B1XMP5_SYNP2)

HSP 1 Score: 119 bits (297), Expect = 1.600e-26
Identity = 63/111 (56.76%), Postives = 77/111 (69.37%), Query Frame = 1

Query:    1 QAERKRLFISREGVLASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKMKDV 333
            QAER+RL I+RE +       E+ AL+I G FLFD A HRDFLG+++  G+ RD +GDILV G+RGAQ LV P +  FL  SL  VRSV VK R IPLEEL VRP K K++
Sbjct:   61 QAERQRLAIAREEIPLDASHVEIAALDIAGNFLFDTATHRDFLGSLLGTGLVRDKVGDILVLGDRGAQTLVIPELVSFLETSLVQVRSVPVKTRSIPLEELKVRPPKKKEL 171

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BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot
Match: UPI0019F7DA76 (Photosystem II S4 domain protein n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019F7DA76)

HSP 1 Score: 119 bits (297), Expect = 1.850e-26
Identity = 64/111 (57.66%), Postives = 79/111 (71.17%), Query Frame = 1

Query:    1 QAERKRLFISREGVLASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKMKDV 333
            QAER+RL ISR  +   + +  + AL+I G FLFD A HRDFLGAI+  G+ RD IGDI+V GERGAQV+V P M +FL  SLT VRSV VK +PI L EL VRP + K++
Sbjct:   67 QAERQRLGISRAEIGLEQTQIALAALDIAGNFLFDPATHRDFLGAILGTGIVRDKIGDIIVLGERGAQVIVVPEMVDFLQTSLTQVRSVTVKTQPIELSELKVRPPQKKEM 177

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BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot
Match: A0A6P0WT39_9CYAN (Photosystem II S4 domain protein n=10 Tax=Oscillatoriales TaxID=1150 RepID=A0A6P0WT39_9CYAN)

HSP 1 Score: 118 bits (295), Expect = 3.450e-26
Identity = 64/110 (58.18%), Postives = 79/110 (71.82%), Query Frame = 1

Query:    1 QAERKRLFISREGVLASELESEVVALEIGGQFLFDMADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTSVRSVKVKVRPIPLEELAVRPAKMKD 330
            QAERKRL I+RE +   + + EV AL+I G FLFD A+HRDFLGA++  G+ R+  GDI+V GERGAQV+V P M EFLA +LT VRSV VK + I L EL VR  K K+
Sbjct:   67 QAERKRLAIAREELPLEQYQVEVAALDIAGNFLFDSANHRDFLGAMLGTGLVREKTGDIIVLGERGAQVIVVPEMVEFLAANLTQVRSVPVKTQQIELSELKVREPKKKE 176

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig6136.16823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J7Q1_9PHAE	3.290e-56	96.40	S4 domain-containing protein n=1 Tax=Ectocarpus sp...	[more]
D7FH66_ECTSI	1.720e-36	98.68	RNA-binding S4 n=1 Tax=Ectocarpus siliculosus TaxI...	[more]
A0A836CE46_9STRA	5.790e-28	58.04	S4 domain-containing protein n=1 Tax=Tribonema min...	[more]
A0A1Z4JNZ0_LEPBY	2.850e-27	55.86	RNA-binding protein S4 n=1 Tax=Leptolyngbya boryan...	[more]
A0A251WKT0_9CYAN	2.910e-27	58.04	Photosystem II S4 domain protein n=2 Tax=unclassif...	[more]
K9XQ09_STAC7	7.260e-27	57.66	Photosystem II S4 domain protein n=2 Tax=Stanieria...	[more]
A0A845X2R8_9CYAN	7.260e-27	55.86	Photosystem II S4 domain protein n=1 Tax=Spirulina...	[more]
B1XMP5_SYNP2	1.600e-26	56.76	S4 domain protein n=10 Tax=Synechococcus TaxID=112...	[more]
UPI0019F7DA76	1.850e-26	57.66	Photosystem II S4 domain protein n=1 Tax=Pleurocap...	[more]
A0A6P0WT39_9CYAN	3.450e-26	58.18	Photosystem II S4 domain protein n=10 Tax=Oscillat...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig6136	contig	Ecto-sp13_S_contig6136:962..5509 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	144.1
Seed ortholog evalue	3.6e-32
Seed eggNOG ortholog	2880.D7FH66
Model size	1847
Hectar predicted targeting category	other localisation
Exons	4
EggNOG free text desc.	isoleucyl-tRNA aminoacylation
EggNOG OGs	COG2302@1,KOG4837@2759
Cds size	294
COG Functional cat.	J
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig6136.16823.1	prot_Ecto-sp13_S_contig6136.16823.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig6136 1067..2553 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681463855.0108557-UTR-Ecto-sp13_S_contig6136:961..1066	1681463855.0108557-UTR-Ecto-sp13_S_contig6136:961..1066	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig6136 962..1066 +
1681463855.0458007-UTR-Ecto-sp13_S_contig6136:2553..2623	1681463855.0458007-UTR-Ecto-sp13_S_contig6136:2553..2623	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig6136 2554..2623 +
1681463855.0544336-UTR-Ecto-sp13_S_contig6136:4131..5509	1681463855.0544336-UTR-Ecto-sp13_S_contig6136:4131..5509	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig6136 4132..5509 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681463855.0206027-CDS-Ecto-sp13_S_contig6136:1066..1126	1681463855.0206027-CDS-Ecto-sp13_S_contig6136:1066..1126	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6136 1067..1126 +
1681463855.0290568-CDS-Ecto-sp13_S_contig6136:1917..2091	1681463855.0290568-CDS-Ecto-sp13_S_contig6136:1917..2091	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6136 1918..2091 +
1681463855.0374835-CDS-Ecto-sp13_S_contig6136:2493..2553	1681463855.0374835-CDS-Ecto-sp13_S_contig6136:2493..2553	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig6136 2494..2553 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig6136:962..5509+
coding sequence from alignment at Ecto-sp13_S_contig6136:962..5509+

protein sequence of mRNA_Ecto-sp13_S_contig6136.16823.1

>prot_Ecto-sp13_S_contig6136.16823.1 ID=prot_Ecto-sp13_S_contig6136.16823.1|Name=mRNA_Ecto-sp13_S_contig6136.16823.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=98bp
MADHRDFLGAIVNLGVTRDGIGDILVQGERGAQVLVDPVMAEFLAGSLTS
VRSVKVKVRPIPLEELAVRPAKMKDVRPARPPPPRLRSERRHGHEPQ*

mRNA from alignment at Ecto-sp13_S_contig6136:962..5509+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig6136.16823.1 ID=mRNA_Ecto-sp13_S_contig6136.16823.1|Name=mRNA_Ecto-sp13_S_contig6136.16823.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4548bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6136:962..5509+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCGGAAAGAAAACGCCTCTTCATTTCTAGGGAGGGAGTGTTGGCCTC
GGAGTTGGAGTCTGAGGTGGTGGCGTTAGAGATCGGGGGTCAGTTTCTGT
TCGACATGGCGGACCACCGCGACTTCCTGGGGGCCATCGTCAATCTCGGG
GTCACGAGAGACGGGGTGAGAGTTTTTTTTTCATTTTTTTTTTGTTCGAA
TTTTTTCCGTCTTGACAAGCTTTGTTTCTTGTTTGCCGTTTTAGCGTGCT
TTCTTTCTGTCATCCGCGAAGAAGTTTTCTTGCTTGTGCAGTCGTGTGTG
TGCTTGTTTCCGTTCAATTTTCGGATTTTTTGTCCGCGAAGATTTACAGA
ACGGATAGACGGGTCGGTTTGATCACCTGTGCTCGGCGATTTCTCTCCCC
TGACGGTGCACGGAACAACGTTTGCTGATGTTTAGGTCTACAGTGCGATC
GGTTTTAATTTCTTTGGATTATATGGTTGTGTTGCACTTTTTTTTTTAAT
TTCGACCTTGTGAAGCTTGCTTGTGGCAGTTCCTGGTGGATCGTTCCACA
GAAAAATGCGGCTGCTGCGGCGACGGCGGTGGTTGTTGCAACTCAGCGGG
GACCTTGTCGATATCGCCCGACACGTCTACCCCTCAATCGCCCCTTCGCG
CATTGTGACGCTTGTCCTTGGAACAGATCTGAGTGCCATCTGAAATCGCC
TGTCTTGGAACACTTGGGCTTCTTTGTCGTCCCCCTCGGAACTCAACTCT
CTTGTGTTTTTTGTCGTGTCGGAGTGCCATCTCGAAATCGCATGTCGTCG
AACACTTGGCCGGCCCCGTGGTCGCCCGTCTCTCGCATTTCTACTCGCCC
TCTCTCTCTGTCTCTTTATCACTTTCTCCCTCCCTTCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGCCC
GTTAAGATCGGAGACATCCTCGTCCAGGGCGAGCGGGGGGCGCAGGTGCT
AGTCGACCCCGTGATGGCCGAGTTCCTGGCCGGGAGTCTCACCAGCGTCA
GGAGCGTCAAGGTTAAGGTCCGGCCGATCCCGCTGGAGGAGCTCGCCGTC
CGACCGGCAAAGATGAAGGACGTGAGACCAGCAACAGCCTCCTTTTCCTT
TTTGGTTTCTCTCGCTAGCCTTGACTGGAACAAATAACATCTTACCTGGT
CCACGAGTTAAGACGGAATTTGCGTTGTCTTAACTTCGCGGTCAGCCTCT
ACCGGGTACGTATGGTTGTTCTCTCCCGACAACCACAGAAAGTCTACCGT
CTCTACATATGTCCACAGTCCAATTGGGGCGTGAAGATAGTCACGGCCTG
AATACTTGGCATGTCTAGAGCCTGTTGAAGCCTCTAAGACGAATTGTTTC
CGGTGGTAGGCTGTGGCAGGATTGATCCATCCCCCGCCCCGCGGCCACAA
AGGAAGACGTGCATCTACGGAGCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCACCGACCACCCCAGGCCCGCCCCCCCCCCCCC
AGACTCCGTAGCGAGCGCCGGCATGGGCATGAGCCGCAGTAAGATGTCGG
CGGCTATCAAGGGCGGCTTGGTGCTTGTCAACTGGAAGGCTGCCAGTTCG
GGCACGACAGATGTACGTTTTTTTTCTTTTTTTGTGCCTTGTCACAGACA
ACATCATAGTCCTTTATGGAGATCAAACATTTCTCGCCAATGGTACATGG
CAAGCAACACTGTTTTAATATTTTCGACGACGGTGCGCTTATTTCTTGTT
TTTTGTATTTTGTGCCTTGCCACAGACAGCATCATCTTGTGGGAATCGAC
CGACATTTCTCGCGAGTGGTTCGTACATGGGAAGTTACAATAATTTCAAC
GCATTTTCGCCACGAGGGTGCTAAGTCGTGGTATGTTTCACGACCACCAC
CACTTGCACGTCCCGGCGGTTTACCGTATTCTTTGCGCGGCTCTGGCACA
ATATCTACGACAGGACCGCCTTCGCTAGACATTTAATTTAGCGAGGAAAT
AAAAGAAGAGAGGGGTATTGTACGCATACCCTTTTCCCTAACCCTAACCC
TAACCCTAACCCGACTTCCCCGATTGTATGCTTTATCCGACATGTTTACA
TTTTACCTAAAACAGTGGCGCGGCTACTGTTTAAGAGAGGGCTGAGACAA
GCCAGTATTTCTCTCACGAATCTAGTTTTCTCTTGAACCGTGCTGTGAAG
TGTATGTATTTCTCATGGTCATGGCAAGGTCTATTGACTCTCTTGTGTTG
GTACTGTCTCTTAAATAGTCTCTCCTAAACCGTAGCCGCCCCTGTACGAA
AAAGCCTCCTAAGGCTGCTGCTACCGCCTTTTATTTGAACCGCTCCGTGA
CTGCTATGCGAGTGAACGCGCTCCCCGTTGGCCGACTCTCAATGGCGTGA
CTCCTCGACGACAAAGAGAGAGTGAATATTCGCTTATACGTCTGTCTTCG
TCTCAACCTAACCCTAACCCTATCCCTATCCCTAAGTGCGAATATTTTAT
ACTTGCCGACACGTCTATCTTCCACCCCGATATCTTGGGTGTATCCGTGC
GTTTTTCGTAAACAGTATAATCAACCTCTCTTTGCGTGTGTTTATGTGCG
TGTATGTGGAGTATCTAATTATCGTCTGTCTTCGTCTCAACCTAACCCTA
ACCCTATCCCTAAGTGCGAATGTTCTATACTTGCCGATACGTCTATCTTC
CACCCCGGTATCTTAGGTGTATCCGTGCGTTTTTCGTAAACAGTATAATC
AACCTCTCTATGCGTGTGTTTGTGTGCGTGTATGTGGAGTATCTAATTAG
CATCGACCGCGCTTACCGGGCGACCAATGAGAAATCGTCAGTCTCGGTGC
GGCTGAAAAGAGGAACCCACTCTAAAGGCCATGCCTTGGGCCCCCGTAGG
GGCGTTTGTGTGCTCGTGGTCGTGTGCGTTTCTTTTGTTATGGCAATCGA
CCGCGCTTACAGGCTGACCAACGAAAATACGCCAGTCTCACGGCGGCTGA
AAACAGAAAATGCTTCCATCGGCCATGATCTGGGAACCCTGCGAGGGGGT
ATCGTGGGGGAGGTTCAGCCAATCTCCGGAGTTTAGACAATGCGCGCTTT
GTGTCTGTTGCCCCGACCAGGTGAAGGAGGGCGACGTCGTGACCGTCAGG
GGGAAAGGCCGGGTTGAGATCGGGGACATTACCGTCACCAAAAAGGGACG
CTACAAGATCAATATGTGCCGTACAACTTGAGTTACAGGTGGTCGTCCAT
CGATTGGGAATCCTTGCGGTTTGCATCACCCCTAGCGCACGGATCAAGTC
GGCGCCAACACGTTTCGGGGTGCTGTGGTTGGCTTGTGACCACCGAAGGC
GTCCGCTTCAGTAGGACCAGCACGGACATTAGAAGGTACTGAGCGGAGAC
CGGAACGGATGGTAGCGGGAGACAACGACAACAACAACATGAGGAACTCT
GGATTGGCCAGCGGCTGGGGTTGTTGGATCCCACGGTTGTTATACAAATG
GCCGGAATTACACATGTTGGTGGTTTCCAACCGGGCTTCCGAATGGTGCG
CAAGTTCTAAGATATTGATTTTCAAGTTTTCTGCCAAGCTCTTAAGTGCA
GACGCTCGAAGAGGCCTTCTGGAGGGTGACCTTGGGCATCACAACCGATA
TGCTATGAATGCCTTGTGTTCCAGAATACTTGGTAGCGCCGAAAATGGCG
ACGTTGGGATCGTCGCGTCAAGGTCGTTCGGCAAACGCATCGTTTGATAC
ATGCATCTTCGTGGTCGTGGGGTATTCGTTCAGGGGAGGGTGGTATCTTG
CGCCACGTACGTACGGTGACCCATGCAATTGCTATCTTGTGCGGGTGTCG
TGGGTACGGTGGGCAGAACGTAGGCATTGCCGTGCATCGTTGCCGAAAAC
GAGTGTTGGGTCGAGAACGTGTTTGGTTATGCCCTGCGCACGCTTTGGAC
GAAGGCGTAGGTTTTGGATATATGTTCCATGTTTTGTGTTCGGCGGGCAA
AGCTGTATGGTGTCAAGGATAGAGTGAAGTGTGGATTTATTCTAGATGGC
GTGTGAGCGTTGCATACGCATCTTACACGGTGAATAGAGCAGCAGTTGAA
TATCGTTGAAAGCACGGGGTAGATGCGTACGCAGCCGCCAGAGAGTTTCT
AGGGAGTGCCAGACTCGACATGGGCATCACTCACTGCGTGGACAAGTGGA
GAAGGTCGTGTCTCGCGATCCATCGTAGGGTACGTGGGTGTGAAAATATG
CCCTTGACGGCCTACAGCAGTACACGGAAACGTGTGACTGAAGGGGTAGA
GGATAGTGCGGACGCCCGGGTCAGGCATTGATTCCGAGATGAGGGAAACG
GCCAACCATCACTCATCGCGCCCCATCAGATACGTTCTGCGCATTCTGAG
AGGGCAAACAATAACAAGCTTTACGCCCCTCAGTACGAGAGTCTTCAGTC
CATCATGACGTGGCGTCGTCGGAGTTTACACATGCTCACATGGACCAC

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6136:962..5509+

>mRNA_Ecto-sp13_S_contig6136.16823.1 ID=mRNA_Ecto-sp13_S_contig6136.16823.1|Name=mRNA_Ecto-sp13_S_contig6136.16823.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=294bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6136:962..5509+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGACCACCGCGACTTCCTGGGGGCCATCGTCAATCTCGGGGTCAC
GAGAGACGGGATCGGAGACATCCTCGTCCAGGGCGAGCGGGGGGCGCAGG
TGCTAGTCGACCCCGTGATGGCCGAGTTCCTGGCCGGGAGTCTCACCAGC
GTCAGGAGCGTCAAGGTTAAGGTCCGGCCGATCCCGCTGGAGGAGCTCGC
CGTCCGACCGGCAAAGATGAAGGACGTGAGACCAGCCCGCCCCCCCCCCC
CCAGACTCCGTAGCGAGCGCCGGCATGGGCATGAGCCGCAGTAA