mRNA_Ecto-sp13_S_contig6135.16821.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6135.16821.1
Unique NamemRNA_Ecto-sp13_S_contig6135.16821.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6135.16821.1 vs. uniprot
Match: D8LBQ0_ECTSI (Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBQ0_ECTSI)

HSP 1 Score: 543 bits (1398), Expect = 6.710e-185
Identity = 305/333 (91.59%), Postives = 310/333 (93.09%), Query Frame = 3 
Query:   93 MYDGFETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRECFKLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATEDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSP---RRSQRAEVVAASILTASEIARQSPVAVFGTKRNLVYARDHSVNDGLEYAATWSGAALQAGDLSTAMSAAAGNPKRSSRREAGAGAEAGSHPHFSKL 1082
            MYDGFETL VSFPARYVLHVQINRPSKRNAMNAKFWIECR+CF+LISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRAT+DVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACD+RLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEA  XXXXXXXXXXXX         XXX        RRSQRAEVVAASILTASEIARQSPVAVFGTKRNL+YARDHSV DGLEYAATWSGAALQAGDLSTAM AAAGNPKRS RREAGAGAEAGSHPHFSKL
Sbjct:    1 MYDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDIRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAAGNPKRSGRREAGAGAEAGSHPHFSKL 333
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BLAST of mRNA_Ecto-sp13_S_contig6135.16821.1 vs. uniprot
Match: A0A6P8I096_ACTTE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I096_ACTTE)

HSP 1 Score: 261 bits (668), Expect = 1.210e-76
Identity = 148/299 (49.50%), Postives = 184/299 (61.54%), Query Frame = 3 
Query:  105 FETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRECFKLISEDADVRAVVVSGMGDHFSAGLDLSDTTN-FDAIGRATEDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSPRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLVYARDHSVNDGLEYAATWSGAALQAGDLSTAMSA 998
            +ETL VS PA +VL V++NRP KRNAMN  FW E  ECF  I+ D+D R VVV+G G  F+AGLDL D    F   G    D AR+A   RK+ L+ QESF+ +E+CP+PVIAAIH AC+GG VDL CACD+RLCS DA F + EV +GLAADVGTLQR+PKIVGN+SL REL+YT R   A EA   G VS +    E+                                      +++A+   AS+IA +SPVAV GTK NL Y+RDHSV +GL Y ATW+ + LQ  D+  A+ A
Sbjct:   50 YETLAVSQPADHVLRVELNRPEKRNAMNQAFWREMVECFNKITNDSDCRXVVVTGAGKIFTAGLDLMDMAGVFMQAGPENADAARKAAELRKIILSYQESFSVIEKCPKPVIAAIHSACIGGGVDLVCACDIRLCSSDAWFQIKEVDIGLAADVGTLQRLPKIVGNDSLVRELSYTARRLPANEAKEAGLVSHIYPDKES--------------------------------------LISAATAMASKIASKSPVAVMGTKHNLNYSRDHSVEEGLNYMATWNMSMLQTEDIMKAVQA 310
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BLAST of mRNA_Ecto-sp13_S_contig6135.16821.1 vs. uniprot
Match: A0A835YKC1_9STRA (Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC1_9STRA)

HSP 1 Score: 254 bits (649), Expect = 2.890e-74
Identity = 151/328 (46.04%), Postives = 196/328 (59.76%), Query Frame = 3 
Query:   96 YDGFETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRECFKLISEDADVRAVVVSGMGDHFSAGLDLSD----TTNFDAIGRATEDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSPRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLVYARDHSVNDGLEYAATWSGAALQAGDLSTAMSAAAGNPKRSSRREAGAGAEAGSHP 1067
            Y GFETL V     +VLHV++NRP++ NAMNA++W E R  F  I+ D +VRAVV+SG G HFSAG+D+      T N  +      DVAR A + ++L L+MQESFT + RCPQPVIAAIHGAC+GGAVDL  ACD+R CS+ A F V EV VGL ADVGTLQR+P++VGN+S  R++ Y+ RTFGAAEA   G VS+V +                                       R  ++AA++  A+ IA  SP+AV GTKR+L +++DHSV DGL + A W+ AAL   DL           +   RR+ GA AE  + P
Sbjct:    5 YVGFETLAVRVAVPHVLHVELNRPNRANAMNAQYWHEMRRLFAAIAVDPEVRAVVISGAGKHFSAGIDMQPGQQPTGNLLSGPGKNSDVARHALKLQQLVLSMQESFTCITRCPQPVIAAIHGACMGGAVDLITACDMRFCSDCALFSVKEVAVGLCADVGTLQRLPRVVGNQSWVRDICYSARTFGAAEAKEFGLVSKVCSGG-------------------------------------REGILAAAMEAAAVIAAHSPLAVTGTKRSLEWSQDHSVADGLAHVALWNSAALMTKDLMIGA-------RPPDRRKGGAAAEGTTKP 288
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BLAST of mRNA_Ecto-sp13_S_contig6135.16821.1 vs. uniprot
Match: V4BYT3_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BYT3_LOTGI)

HSP 1 Score: 254 bits (649), Expect = 3.730e-74
Identity = 144/297 (48.48%), Postives = 183/297 (61.62%), Query Frame = 3 
Query:  102 GFETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRECFKLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATEDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSPRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLVYARDHSVNDGLEYAATWSGAALQAGDLSTAM 992
             FETL V+ P  +VL V+INRP KRNAMN  FW E  ECF  IS+D+D RAV+ +G G  F+AGLDL D  N  A  ++  DV R+A + RKL  + QESFTA+E+CP+PVIA +H ACVGG +DL  ACD+R  S DA FCV EV +GLAADVGTLQR+PKI+GN+S+ RELAYT R F A EA ++G + R+    E                                       ++  ++ TAS IA +SP+AV GTK  LVYARDH V++GL+   TW+   LQ+ DL  AM
Sbjct:   34 NFETLKVTQPREFVLQVEINRPEKRNAMNQAFWREMVECFNQISDDSDCRAVIFTGSGKIFTAGLDLMDMDN--AFMQSDLDVGRKAMKLRKLIRSYQESFTAIEKCPKPVIACVHSACVGGGIDLIAACDMRYSSSDAWFCVKEVDIGLAADVGTLQRLPKIIGNDSIARELAYTARKFFADEAKQIGLIGRIFENKET--------------------------------------MIQGALDTASLIASKSPIAVQGTKVCLVYARDHGVSEGLDQMVTWNQNMLQSEDLMKAM 290
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BLAST of mRNA_Ecto-sp13_S_contig6135.16821.1 vs. uniprot
Match: UPI00109BEF07 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BEF07)

HSP 1 Score: 253 bits (646), Expect = 1.210e-73
Identity = 146/300 (48.67%), Postives = 185/300 (61.67%), Query Frame = 3 
Query:  105 FETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRECFKLISEDADVRAVVVSGMGDHFSAGLDLSDTTN--FDAIGRATEDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSPRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLVYARDHSVNDGLEYAATWSGAALQAGDLSTAMSA 998
            FETL VS P++ V  V++NRP KRNAMN  FW E RECF  IS DAD RAVV++G G  F+AGLDL +       + G   +D++R+A + R + L  QESFT +++C +PVIAAIH ACVGG VD+ CACD+RLCS DA F V EV++GLAADVGTLQR+PKI+GNESL REL YT R F A EA   G VS +                                         R  +V+A++  AS IA+ SPVAV GTK NL Y+RDH V++ L Y ATW+ + LQ+ D+  A+ A
Sbjct:   38 FETLAVSQPSQNVFQVELNRPEKRNAMNQVFWREMRECFSKISSDADCRAVVLTGAGKIFTAGLDLMEMAGVLMQSTG-GDQDISRKAAKLRDVVLQYQESFTVIDKCSKPVIAAIHSACVGGGVDMICACDIRLCSADAWFQVKEVELGLAADVGTLQRLPKIIGNESLVRELCYTARRFLAHEAKDAGLVSHIYP--------------------------------------DRESLVSAALNMASTIAKMSPVAVMGTKHNLNYSRDHGVDEALNYIATWNMSMLQSEDILKAVQA 298
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BLAST of mRNA_Ecto-sp13_S_contig6135.16821.1 vs. uniprot
Match: UPI001CF3EB97 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3EB97)

HSP 1 Score: 251 bits (642), Expect = 6.620e-73
Identity = 138/299 (46.15%), Postives = 188/299 (62.88%), Query Frame = 3 
Query:  102 GFETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRECFKLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATEDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSPRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLVYARDHSVNDGLEYAATWSGAALQAGDLSTAMSA 998
             FETL VS P  +V+HV++NRP KRNAMN  FW E  ECFK I++D++ RAVV++G G  F+AGLDL +      +  + +D +RRAF  RK  L++Q+SF  +E CPQPVIAA+H  C+GG +D+ C+CD+RLCS DA F V E+ +GLAAD+GTLQ+ PKIVGN+SL REL YTGR+F + EA  +GFVSR+                                       S R  +V  ++  A+EI+++SPVA+ G K NL + R+HS   G+EY ATW+ A LQ+ D+  A+ A
Sbjct:   52 SFETLAVSKPHEHVIHVELNRPEKRNAMNKAFWREMVECFKQIADDSNCRAVVLTGAGKIFTAGLDLREMGG--DLMNSGQDPSRRAFYLRKFILSLQKSFQVIEECPQPVIAAVHSGCLGGGIDMICSCDIRLCSADAWFQVKEIDLGLAADLGTLQKFPKIVGNDSLARELCYTGRSFTSQEALNLGFVSRMC--------------------------------------SDRESLVKEAVELATEISKKSPVAMAGIKHNLNFTREHSPKAGMEYMATWNMAMLQSEDILKAVQA 310
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BLAST of mRNA_Ecto-sp13_S_contig6135.16821.1 vs. uniprot
Match: A0A2B4RA31_STYPI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RA31_STYPI)

HSP 1 Score: 251 bits (641), Expect = 9.210e-73
Identity = 141/296 (47.64%), Postives = 187/296 (63.18%), Query Frame = 3 
Query:  105 FETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRECFKLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATEDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSPRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLVYARDHSVNDGLEYAATWSGAALQAGDLSTAM 992
            FETL V+ P  +V+ V++NRP KRNAMN  FW E  +CF+ I++DAD RAVV++G G  F+AGLDL D  +   +  +  + +RRA   RKL L +Q+SF  +E+CPQPVIAA H ACVGG VD+ C+CD+RLCS DA F + E+ +GLAAD+GTLQ+ PKI+GN+SL REL +TGR F A EA + GFVSRV                                   SP R     +V  ++  A +IA++SPVA+ GTK NL ++RDHS  +GLEY ATW+ A LQ  D+  A+
Sbjct:   53 FETLAVTKPLDHVIQVELNRPDKRNAMNGTFWREMVDCFRQIADDADCRAVVLTGAGKIFTAGLDLMDMGS--NLMSSDLEPSRRAHLLRKLILFLQDSFRTIEKCPQPVIAAFHSACVGGGVDMICSCDIRLCSSDAWFQIKEIDIGLAADLGTLQKFPKIIGNDSLARELCFTGRRFTAEEALQFGFVSRV-----------------------------------SPGRDS---LVKEALELAGQIAKKSPVAMAGTKHNLNFSRDHSAQEGLEYMATWNMAMLQTEDILKAV 308
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BLAST of mRNA_Ecto-sp13_S_contig6135.16821.1 vs. uniprot
Match: A0A7D9IU21_PARCT (Delta(3,5)-Delta(2,4)-dienoyl- isomerase, mitochondrial n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IU21_PARCT)

HSP 1 Score: 251 bits (640), Expect = 9.690e-73
Identity = 143/298 (47.99%), Postives = 179/298 (60.07%), Query Frame = 3 
Query:  105 FETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRECFKLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATEDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSPRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLVYARDHSVNDGLEYAATWSGAALQAGDLSTAMSA 998
            FETL V+ P  +V  V INRP KRNAMN  FW E   CF  I+ D + RAVV+SG G  F+AGLDL D  +     +  +DV+RRA+  RK  L  QESF+ +E+CPQPVIAAIH ACVGG VD+ CACD+R C+ DA F V EV++GLAADVGTLQR+PKIVGNESL REL YT R   + EA   G VSR+                                         R  ++ +++  AS IA+ SPVAV GTK NL Y+RDH V++ LEY A+W+ + LQ  D+  A+ A
Sbjct:   42 FETLEVTKPRDHVFQVNINRPEKRNAMNQTFWSEMVTCFNKIATDTECRAVVLSGAGKIFTAGLDLMDMASVIMSQQDDQDVSRRAYNMRKTILQFQESFSVIEKCPQPVIAAIHSACVGGGVDMICACDIRWCTSDAWFQVKEVELGLAADVGTLQRLPKIVGNESLVRELCYTSRKLMSEEAKSFGLVSRIF--------------------------------------QDRESLIDSALDLASHIAKMSPVAVSGTKHNLNYSRDHPVDESLEYIASWNMSMLQTDDILKAVQA 301
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6135.16821.1 vs. uniprot
Match: A7SDI6_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SDI6_NEMVE)

HSP 1 Score: 248 bits (632), Expect = 4.960e-72
Identity = 148/299 (49.50%), Postives = 181/299 (60.54%), Query Frame = 3 
Query:  105 FETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRECFKLISEDADVRAVVVSGMGDHFSAGLD-LSDTTNFDAIGRATEDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSPRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLVYARDHSVNDGLEYAATWSGAALQAGDLSTAMSA 998
            FETL V+ P   VL V++NRP KRNAMN  FW E  ECF  IS+D D RAVV+SG G  F+AG D L D          ++D AR+A   R+  LA QESFTA+E+C +PVIAA+H ACVGG VD+ CACD+RLC+ DA F V EV++GLAADVGTLQRMPKIVGNESL REL YT R   A EA   G VS                                   G+ P R +   V++A++  A++IA+ SPVAV GTK NL Y+RDH V+  L+Y ATW+   LQ  D+  A  A
Sbjct:    9 FETLAVTRPRENVLQVEMNRPDKRNAMNQTFWREMVECFDQISKDGDCRAVVLSGAGKIFTAGNDHLMDMAGVLMSSADSDDPARKAIHIRQTILAYQESFTAIEKCEKPVIAAVHSACVGGGVDMICACDIRLCTSDAWFQVKEVELGLAADVGTLQRMPKIVGNESLVRELCYTARRLLAHEAKEAGLVS-----------------------------------GIYPNRER---VISAALDMAAKIAKMSPVAVTGTKHNLNYSRDHPVDASLKYIATWNMTMLQTEDIMKAAQA 269
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6135.16821.1 vs. uniprot
Match: UPI001B887ADC (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B887ADC)

HSP 1 Score: 248 bits (634), Expect = 5.470e-72
Identity = 140/298 (46.98%), Postives = 184/298 (61.74%), Query Frame = 3 
Query:  105 FETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRECFKLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATEDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSPRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLVYARDHSVNDGLEYAATWSGAALQAGDLSTAMSA 998
            FETL ++ P  +V+ V+++RP KRNAMN  FW E  ECF  +S+D D R VVVS  G  F+AG+DL+D        ++  DV R+AF  +K   A QE+F+ +E+CP+PVIAAIH AC+GG +D+  ACD+R CS+DA F + E+ VGLAADVGTLQR PKIVGN+SL RELAYT R F A EA +MGF+SR+    E                                       +V +++  AS IA +SPVAV GTK +LV++RDHSV +GLE+ A W+ A LQ+ DL  A  A
Sbjct:   34 FETLQLTRPREFVVQVELSRPEKRNAMNTAFWREMVECFNYLSDDTDCRVVVVSAAGKMFTAGIDLTDLDGLVGTLQSKMDVGRKAFVAKKTIKAYQETFSVIEKCPKPVIAAIHNACIGGGIDMTSACDIRYCSQDAWFQIKEIDVGLAADVGTLQRFPKIVGNDSLTRELAYTARKFYADEAKQMGFISRIFPDKET--------------------------------------MVQSALDVASLIASKSPVAVQGTKVSLVFSRDHSVPEGLEHIAMWNQAMLQSEDLMKAAMA 293
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6135.16821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBQ0_ECTSI6.710e-18591.59Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ect... [more]
A0A6P8I096_ACTTE1.210e-7649.50delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A835YKC1_9STRA2.890e-7446.04Peroxisomal enoyl-coenzyme A hydratase n=1 Tax=Tri... [more]
V4BYT3_LOTGI3.730e-7448.48Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
UPI00109BEF071.210e-7348.67delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
UPI001CF3EB976.620e-7346.15delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A2B4RA31_STYPI9.210e-7347.64Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A7D9IU21_PARCT9.690e-7347.99Delta(3,5)-Delta(2,4)-dienoyl- isomerase, mitochon... [more]
A7SDI6_NEMVE4.960e-7249.50Predicted protein n=2 Tax=Nematostella vectensis T... [more]
UPI001B887ADC5.470e-7246.98delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6135contigEcto-sp13_S_contig6135:862..6060 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score547.0
Seed ortholog evalue6.2e-153
Seed eggNOG ortholog2880.D8LBQ0
Preferred nameECH1
Model size2610
KEGG koko:K12663
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009987,GO:0015031,GO:0015833,GO:0016042,GO:0016043,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0031907,GO:0031974,GO:0032787,GO:0033036,GO:0033365,GO:0034440,GO:0034613,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051750,GO:0055114,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072329,GO:0072594,GO:0072662,GO:0072663,GO:1901575
Exons4
EggNOG free text desc.delta3,5-delta2,4-dienoyl-CoA isomerase activity
EggNOG OGsKOG1681@1,KOG1681@2759
Ec32 ortholog descriptionperoxisomal enoyl-coenzyme A hydratase
Ec32 orthologEc-27_003160.1
Cds size993
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6135.16821.1prot_Ecto-sp13_S_contig6135.16821.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6135 2387..5968 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463854.853606-UTR-Ecto-sp13_S_contig6135:861..23861681463854.853606-UTR-Ecto-sp13_S_contig6135:861..2386Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6135 862..2386 -
1681463854.9282017-UTR-Ecto-sp13_S_contig6135:5968..60601681463854.9282017-UTR-Ecto-sp13_S_contig6135:5968..6060Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6135 5969..6060 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463854.8696659-CDS-Ecto-sp13_S_contig6135:2386..28841681463854.8696659-CDS-Ecto-sp13_S_contig6135:2386..2884Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6135 2387..2884 -
1681463854.8833272-CDS-Ecto-sp13_S_contig6135:3332..35241681463854.8833272-CDS-Ecto-sp13_S_contig6135:3332..3524Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6135 3333..3524 -
1681463854.896181-CDS-Ecto-sp13_S_contig6135:4758..48801681463854.896181-CDS-Ecto-sp13_S_contig6135:4758..4880Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6135 4759..4880 -
1681463854.9132485-CDS-Ecto-sp13_S_contig6135:5787..59681681463854.9132485-CDS-Ecto-sp13_S_contig6135:5787..5968Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6135 5788..5968 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6135.16821.1

>prot_Ecto-sp13_S_contig6135.16821.1 ID=prot_Ecto-sp13_S_contig6135.16821.1|Name=mRNA_Ecto-sp13_S_contig6135.16821.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=331bp
MYDGFETLLVSFPARYVLHVQINRPSKRNAMNAKFWIECRECFKLISEDA
DVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATEDVARRAFRFRKLALAM
QESFTAVERCPQPVIAAIHGACVGGAVDLACACDVRLCSEDAGFCVAEVK
VGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAA
PEAATAAAAAAAAATAGGKRRAGAASAASAGVSPRRSQRAEVVAASILTA
SEIARQSPVAVFGTKRNLVYARDHSVNDGLEYAATWSGAALQAGDLSTAM
SAAAGNPKRSSRREAGAGAEAGSHPHFSKL*
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mRNA from alignment at Ecto-sp13_S_contig6135:862..6060-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6135.16821.1 ID=mRNA_Ecto-sp13_S_contig6135.16821.1|Name=mRNA_Ecto-sp13_S_contig6135.16821.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5199bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6135:862..6060- (Ectocarpus species13 EcNAP12_S_4_19m)
GAAGACGTGCCCCCGCAACAAGGAGAGTAGGCAGCAGAGAGAGGCCGATC
CGTGATTACTGCTGCTTCCCACCTTCACCTTCCCACACCATTATGTACGA
TGGTTTTGAGACGCTGCTCGTGTCTTTCCCGGCACGATACGTTCTGCACG
TACAGATAAATCGGCCGAGCAAGAGGAACGCCATGAACGCAAAGTTTTGG
ATAGAGTGTCGGGAATGCTTCAAGCTCATCTCGGAGGATGCCGACGTGCG
GGCGGTTGTGGTGTCTGGGATGGGTGAGTTGCTGAGATTCGATCAGCACG
ACAAGGCTGAGCTAGCAATATCGTGCACATGCCCCTTTTGTTGTCATGAA
CTTGGGGCTTGCAGGAAGAGAATCGCCTCCGCCATTTTGCCGCGGTTCCA
CCGCAGCACATGTATGTGGCAGCGTTGCCGCACCCTTTTTTACAGCTGTG
TCAAGCGTCAGCTTCGATGTCTGCATGTCGCACTCACTACTTTAGGTAGC
CACCTGCTGCTTTGCAATTTTCAAGGATTGCAAGCATTGTGGCAATTGGT
GCATTGGCGTGGGGCCATGAGGGGCACACTTCAGATATCAACAGGGTACA
GCAGCAGGGCGTTTTGAGCGAACGAGATCATGTGTCATGTACCGGACGGG
TTCTTCCTCGCAACGGCCCCGCGGTCGGAGCACACAAGCGCACAAGCGTG
GTATCATTGTAGCCTTCGATATAACGAGAGTGTGAAGAAGTTGGCACTAC
GTTCAAGTGTTTTTTTATCCCTTGCAACTTAGACGAGGGGAGACCCCTTA
TTACTGCACCGCAGTACCGCAGTGTCACTTTCTGGTCCTCAGCGATCTGA
GGTCTGCACTGGCAACAACAGGGCCACCGGGTGGGTGCATGCCGGTTATT
TGCGGGGATTACCAGGGAGTGAAAGGCCAGAAGGCCGCGGCGAATGTATC
ATACGCGAATGCCCTGACATGTTTCATCTGAAATTCGAAAAAGTAAAACA
CAACCAAACAATCACGGCAACAACTTTGCGATACCCGCGCCTGCCCGCGA
CTGACTCTTGTAGCCCTCGTCGTCCGTACCTTCTTCGCCTTCATCACAAA
CTAACAGCCCTACGACACGACACACCAACAAAACCCCGTTCCTTTGGCTT
CTCCCGACCTCTTCTCGAATCGCCCAACAGGCGACCACTTTTCCGCGGGA
TTGGACCTGTCCGACACGACAAACTTCGACGCCATCGGAAGGGCCACGGA
GGACGTCGCTCGACGAGCGTTTCGTTTCCGAAAGCTTGCTTTAGCGATGC
AGGTACGTACGTTTTTTGCTTGGTTCGGACGTTCGTCGGCTCGAGTATGT
AGATGCTTTAAATTTTGCCTCAGATTTGCATACGGCCTTCGTCAAACGTT
GCCACCTCTTCTCACCATTTTAGTCTATTTGTGACAATTTGTGAGAGGTA
AACACCCACAGCAATCAAGTCCTTTAGAGAATGTGAACATATACACATGC
ATACCTTCAGATAGAGAGAAGGCGAAGTCCGCGTCTGACACAGAAAGGGG
CCTTGTTTTCTCTTCGCACGTAGGTGGACTTTCCGTTGTCATGTCCACAG
CAGCAGCACAATGTGGGTTTTCATTGCGAGCGCCAACGTTAATTTCCTTC
GAGGGGCGGGGCCGAGAAGGTAGTGAGTAGAGGTCAATATTTTTTTTCTT
TTGCCAGACCACATCTCAATAATTTATGGACAGTTTCGACTCACTTGTTT
CCGAGATGAATACCCTGCCTTGTACAAGGTAGGCGCGAAGGGTTGTTTTG
TCAACGAACCGCTGTGGTACGTAATTGCGACCAACTGTTTGTTCAGGCGC
CCCCTTTGTCTAGGCAGCGCAAGACAGTATCCTTACGTATGTTCACTAGC
AGTGGGCAAGCCAGAAAGCAAAATTACTCCTTATCCGAACGCTGCTACTG
CTGCCTTCCGTGGCCAAGAAAGTATGGTACCCGAGCCCACGTTACTCACA
AGCCATTCTTGGGATGCATCTTGCCGCGCGTGTATTTGCCGAGCGAGTTG
AAAACTCCGACTGCAACAAGTATGCCTTCGCGCTTGGCAAGACGCCCGCT
ACCTTTCTTTTCGACAGACGGCATCCACTGCTCTGCCGTCGCTTTGTTGG
AGGGTGCGGTAAGTGCTTCGTCTCGGAGATGGAAGTGCGCAGTCTGAAGG
CACCGTCCCCAACATTTCAAGACATGGAAGTACATAGCAAGCGCTACGTT
GTAGATTTGATCCCCCTCTCCCCCCCCCGTGCCTTCTTGAATTCCACGGT
GGTATCAATGTAAGTAAGAATGTGCCAACCCTCCTGTTGAGAGGGATAGC
ACAGGCGGTCCTTGGTCGGTGGTTAAACACCCACCTAATGCAAGCAACAA
GCAGGCCTCCCCCGCGACGCCACCCTTGCCTCATCCTTCTACAACGCAGT
AAAAGTGAAGTACCCCGCTCCACTCCATTCCGCGTCTCACCACCACCGTC
AATCCAACCAACCAACGTTGCCTGACCGAAACTCAGGAGTCGTTCACGGC
CGTGGAGCGGTGCCCCCAACCCGTAATCGCGGCGATCCACGGGGCGTGCG
TGGGAGGAGCGGTGGATTTGGCTTGCGCCTGCGACGTCAGGCTCTGTTCC
GAGGACGCGGGATTCTGCGTCGCTGAGGTCAAGGTCGGCCTAGCGGCGGA
CGTGGGGACGTTACAACGAATGCCCAAGGTGCCCCCCTTGACTATGTCAG
CTACATCATTTTGTTTTTGTGCTGTTTTCATGTACTTTTTCGTGTCTGAA
TTTTCCAGAGCTCAACATGTGTAGTGCGTGTCCAAGACCAAGTTTTCAAG
GGGCCTTACACCGCAACGAATGCACTGTGCCTAAGGCCAACGAGACAGAT
TTTTTTGTTGCCATCGCTCGGTGCGTCTCCTTCGGTCTGCTGGCGGGACT
ACCTGTCGGGCGCTCATCGATTGACCGCAACAACGGAACAATGAAAGAGA
CGCCATCGACAACGCCATCAACACTAACACCGACAGCACCGACAGCAATC
TTCACACACACACACACACACACACAACACACCACCACCACCACCACCAC
CACCACCACCACCACGCTTGCCTGAAAGCTGAAACGCTAACGTCATATCA
TAACTCACTAAATATTAACACCGCAGATAGTGGGCAACGAGTCACTGTGC
AGGGAGCTCGCCTACACTGGACGGACGTTCGGAGCGGCTGAGGCATCACG
CATGGGGTTTGTCTCCCGTGTCGTCGCCGCCCCCGAAGCAGCAACCGCCG
CCGCCGCCGCCGCTGCAGCTGCTACGGCAGGTGGTAAGCGGCGTGCCGGG
GCGGCGTCGGCTGCGTCGGCAGGAGTATCACCCCGTCGCTCCCAACGAGC
AGAAGTCGTCGCCGCCTCGATTCTGACGGCCTCGGAGATTGCCAGGCAAA
GCCCCGTTGCTGTTTTTGGGACCAAGCGTAACCTTGTCTACGCGCGGGAT
CACAGCGTGAATGATGGGTTAGAGTATGCGGCGACGTGGAGCGGGGCGGC
ACTCCAGGCCGGGGATCTGAGCACAGCCATGAGTGCTGCGGCTGGAAATC
CGAAACGAAGTAGTAGGAGAGAGGCGGGAGCGGGAGCAGAGGCGGGTTCG
CACCCGCATTTTTCGAAATTATAGCGATTTGCGGCAGGGGAGTGGGAAGG
GTTGCCGCAAGGGCTCGAGGGTCAAGGAAACCGGGCGAAGCGGCGGCGAA
GGCATTTAATTCGTCGGGTGTACAGTTTTACCGAAGGGGGGGAGCATGGT
CGTGTTGCCCAGTGTATGTGGTGTTTTGCGTTTGTGTGCCTTGTTGATGC
AGCATTGATACGGTCTAAGGTACCATGCGCGTTTTTGTATTTGGGAATAC
TGTTGTAGCTCGCGGGAAGACTAGATTGGTGTAAGTGTTATCCCACAACT
GCTGTATTCATCATCAGCAAGGTGTGGACGATGGATGGATGCATGAATGA
TGAAACAGGCGGCAGAAAGTTACGAGGGATATTTGTCGTCTTTGCTACGG
GTGAGGGTGTGTGGGATGATCAATGTTGGATTGGTTTCAGGAACTAATGG
ACAACAGCACAAAAATGATTTGCACAGGGCACACTGTTTATGGACGCTGT
GCTATCGTTTACCTACCCTTACCTTCGCAGGGCCACACAGATAGGACTTT
GTGTGCTAAAAGGAGTGAGGAGATAGGAGGAGGAGGAGGACGGCCGTAAG
GTTGACCACCAGAACCTTAGGGGGTGCATCAACGCATGTCACTATGGGCC
ACTGGTTTCGGCGTGAGGTTCTCGGTACCTGTATTCAACGTGTAGACTTT
GAAGTATTAACGGGTATCGCACGGATTTGTCCTGCTGGTTTTAACGGAGG
CCCGCTTGGCTGGTCCTATGTTTAGGTTTTGCTTGACTTATACGATCTTC
AGCAGAACTCTTTGGCTAGATTCACGAGATCCTTCAGGGTCATCGCACAA
TACTGTGTAGGTTTCAGAGGCGTCTAACGGCGGGTCAGGGCCGACCGTAT
CTTCCCTTGTTGCAAGATAGCCCTGGGCGAGGAACGAGATGAAGGCCAGG
TTGTTTCTGCTGGAGAGGAGTAAGGTTGGCGAGGTACTGAAGTTTTCCGG
ATGATGGATGAAATTAAGGGATCGGAAGAGATTGATTGTTGGTTGGTGTT
GCAAGCTGCGGTGTTGCGTTACTTGAGTGTTTGGGCGGGGTGTGTGTGTT
GTAGAAGGTGTACGTCCACGCGACAGCAGGGAAGGGGGAGCCGGTCGGGC
ATGGGCAGGTATGGGGGGGCATCGGATGGCACCCTTTGTCTTCATTCTGG
AGGGTCGTGGATAGACGGCGCCATTCCATAGTCGGTGGATGCCAAATGAT
GATCTAATCGTCGACGCCAGCAAGAAAGGACACAGGCTGCCCTCATTAGA
AGGAGGCCAGGTCGGGGAAGTGTTTACCTTCTACCGAGGGCAAGCAGTCT
CCTTCTTGTGCGAGATTGGCAAGGAGAATGTCCGGAAGCGAGAGGGGCGA
GAGGAAGACATGCACCGGGTGGCTTTGAAAGAGTCGAATCCAAAGAGCGC
GGTTTCTTGCTGTCCAGCAATCAACAACGGATCAACAACAATGAACATTT
GCTCAAATCGTATCTTGCTACACCCATGTACCTGTCTGTGATATCCGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6135:862..6060-

>mRNA_Ecto-sp13_S_contig6135.16821.1 ID=mRNA_Ecto-sp13_S_contig6135.16821.1|Name=mRNA_Ecto-sp13_S_contig6135.16821.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=993bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6135:862..6060- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTACGATGGTTTTGAGACGCTGCTCGTGTCTTTCCCGGCACGATACGT
TCTGCACGTACAGATAAATCGGCCGAGCAAGAGGAACGCCATGAACGCAA
AGTTTTGGATAGAGTGTCGGGAATGCTTCAAGCTCATCTCGGAGGATGCC
GACGTGCGGGCGGTTGTGGTGTCTGGGATGGGCGACCACTTTTCCGCGGG
ATTGGACCTGTCCGACACGACAAACTTCGACGCCATCGGAAGGGCCACGG
AGGACGTCGCTCGACGAGCGTTTCGTTTCCGAAAGCTTGCTTTAGCGATG
CAGGAGTCGTTCACGGCCGTGGAGCGGTGCCCCCAACCCGTAATCGCGGC
GATCCACGGGGCGTGCGTGGGAGGAGCGGTGGATTTGGCTTGCGCCTGCG
ACGTCAGGCTCTGTTCCGAGGACGCGGGATTCTGCGTCGCTGAGGTCAAG
GTCGGCCTAGCGGCGGACGTGGGGACGTTACAACGAATGCCCAAGATAGT
GGGCAACGAGTCACTGTGCAGGGAGCTCGCCTACACTGGACGGACGTTCG
GAGCGGCTGAGGCATCACGCATGGGGTTTGTCTCCCGTGTCGTCGCCGCC
CCCGAAGCAGCAACCGCCGCCGCCGCCGCCGCTGCAGCTGCTACGGCAGG
TGGTAAGCGGCGTGCCGGGGCGGCGTCGGCTGCGTCGGCAGGAGTATCAC
CCCGTCGCTCCCAACGAGCAGAAGTCGTCGCCGCCTCGATTCTGACGGCC
TCGGAGATTGCCAGGCAAAGCCCCGTTGCTGTTTTTGGGACCAAGCGTAA
CCTTGTCTACGCGCGGGATCACAGCGTGAATGATGGGTTAGAGTATGCGG
CGACGTGGAGCGGGGCGGCACTCCAGGCCGGGGATCTGAGCACAGCCATG
AGTGCTGCGGCTGGAAATCCGAAACGAAGTAGTAGGAGAGAGGCGGGAGC
GGGAGCAGAGGCGGGTTCGCACCCGCATTTTTCGAAATTATAG
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