prot_Ecto-sp13_S_contig61317.16818.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig61317.16818.1
Unique Nameprot_Ecto-sp13_S_contig61317.16818.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length70
Homology
BLAST of mRNA_Ecto-sp13_S_contig61317.16818.1 vs. uniprot
Match: A0A6H5K059_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K059_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 3.920e-37
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    1 MPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRSRRS 70
            MPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRSRRS
Sbjct:  250 MPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRSRRS 319          
BLAST of mRNA_Ecto-sp13_S_contig61317.16818.1 vs. uniprot
Match: A0A7S1G8W2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8W2_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.400e-17
Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    2 PGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFML 62
            PGVTR +SA +++S PP+YL+DTPG+M+PRV++   GL LALT A+P++ VP  VLV F+L
Sbjct:   55 PGVTRHISAIQVSSRPPVYLLDTPGIMLPRVDNPHVGLKLALTGALPENTVPTRVLVDFLL 115          
BLAST of mRNA_Ecto-sp13_S_contig61317.16818.1 vs. uniprot
Match: A0A482RDB0_9ARCH (G domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RDB0_9ARCH)

HSP 1 Score: 77.0 bits (188), Expect = 2.730e-15
Identity = 32/61 (52.46%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    2 PGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFML 62
            PG+TR VSAF++ + PPLY+ D+PG+M+PR+ES  AG+ LA+T A+PD+ +P  VL  ++L
Sbjct:   87 PGITRSVSAFKLNTKPPLYVFDSPGIMLPRIESVEAGMKLAVTNALPDTIIPKPVLAEYLL 147          
BLAST of mRNA_Ecto-sp13_S_contig61317.16818.1 vs. uniprot
Match: A0A833QU74_9POAL (Mitochondrial ribosome-associated GTPase 1 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QU74_9POAL)

HSP 1 Score: 74.3 bits (181), Expect = 5.320e-14
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    1 MPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRSRRS 70
            +PGVT+ +S F+IA+ P +Y++DTPGV+VP++     GL LALT AV DS V  + L  +ML V+ +RR+
Sbjct:  175 LPGVTQDISGFKIANRPSIYVLDTPGVLVPKISDMETGLKLALTGAVKDSVVGEERLAKYMLSVLNTRRT 244          
BLAST of mRNA_Ecto-sp13_S_contig61317.16818.1 vs. uniprot
Match: A0A7S0WH74_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WH74_9CHLO)

HSP 1 Score: 70.1 bits (170), Expect = 4.000e-13
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFML 62
            +PGVTR +SAF+I  NP +Y++DTPGVMVPR+     GL LALT +V DS V  + L  ++L
Sbjct:    8 LPGVTRHLSAFKIGGNPSMYVMDTPGVMVPRIADLEVGLKLALTGSVKDSVVGEERLAQYLL 69          
BLAST of mRNA_Ecto-sp13_S_contig61317.16818.1 vs. uniprot
Match: A0A7J7QK11_9CHLO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QK11_9CHLO)

HSP 1 Score: 71.6 bits (174), Expect = 4.510e-13
Identity = 33/66 (50.00%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    2 PGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRS 67
            PG+TRQVS F++A+ PP+Y++DTPGVM+P V S   G  LAL  A+ DS V  + +V F++  V S
Sbjct:  160 PGLTRQVSGFQVAAEPPIYVLDTPGVMMPAVPSDEVGFKLALAGAIKDSVVGEEAIVRFLISQVSS 225          
BLAST of mRNA_Ecto-sp13_S_contig61317.16818.1 vs. uniprot
Match: A0A813A5Q3_9DINO (MTG1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A5Q3_9DINO)

HSP 1 Score: 69.7 bits (169), Expect = 4.740e-13
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    3 GVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRSRRS 70
            GVTR  SAF ++++P ++L+D+PG++VPR++  T G+ LAL  A+PD++VP D L  F+L   R  RS
Sbjct:  122 GVTRFTSAFPVSTDPAVFLMDSPGILVPRIQDTTQGVKLALCGALPDASVPADELAHFLLCHARDTRS 189          
BLAST of mRNA_Ecto-sp13_S_contig61317.16818.1 vs. uniprot
Match: A0A383VII8_TETOB (CP-type G domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VII8_TETOB)

HSP 1 Score: 71.6 bits (174), Expect = 5.060e-13
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    2 PGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRS 67
            PG+TRQVS F++A+ PP+Y++DTPGVM+P + S   G  LAL  A+ DS V  + +V F+L  + S
Sbjct:  160 PGLTRQVSGFQVAAQPPIYVLDTPGVMMPAIPSDEVGFRLALAGAIKDSVVGEEAIVRFLLSQISS 225          
BLAST of mRNA_Ecto-sp13_S_contig61317.16818.1 vs. uniprot
Match: A0A0K9NMV2_ZOSMR (Ribosome biogenesis GTPase A n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NMV2_ZOSMR)

HSP 1 Score: 69.7 bits (169), Expect = 2.500e-12
Identity = 30/70 (42.86%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    1 MPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRSRRS 70
            +PGVT+ ++ F+I++ P +Y++DTPG++VPR+     GL LALT AV DSAV  + L  ++L ++  R++
Sbjct:  178 LPGVTQDIAGFKISNRPSIYVLDTPGILVPRIHDIETGLKLALTGAVKDSAVGEERLAQYLLAILNIRKT 247          
BLAST of mRNA_Ecto-sp13_S_contig61317.16818.1 vs. uniprot
Match: A0A1D1Z6V0_9ARAE (Ribosome biogenesis GTPase A (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Z6V0_9ARAE)

HSP 1 Score: 69.7 bits (169), Expect = 2.670e-12
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 0
Query:    1 MPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRSRRS 70
            +PGVT+ ++ ++IAS P +Y++DTPGV+VP +     GL LALT AV DS V  + L  ++L V+ +RR+
Sbjct:  216 LPGVTQDIAGYKIASQPSIYVLDTPGVLVPSIPDIETGLKLALTGAVKDSVVGEERLAKYLLSVLNNRRT 285          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig61317.16818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K059_9PHAE3.920e-37100.00G domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A7S1G8W2_9STRA3.400e-1757.38Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A482RDB0_9ARCH2.730e-1552.46G domain-containing protein (Fragment) n=1 Tax=arc... [more]
A0A833QU74_9POAL5.320e-1448.57Mitochondrial ribosome-associated GTPase 1 n=1 Tax... [more]
A0A7S0WH74_9CHLO4.000e-1353.23Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7J7QK11_9CHLO4.510e-1350.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A813A5Q3_9DINO4.740e-1347.06MTG1 protein (Fragment) n=1 Tax=Symbiodinium sp. K... [more]
A0A383VII8_TETOB5.060e-1348.48CP-type G domain-containing protein n=1 Tax=Tetrad... [more]
A0A0K9NMV2_ZOSMR2.500e-1242.86Ribosome biogenesis GTPase A n=1 Tax=Zostera marin... [more]
A0A1D1Z6V0_9ARAE2.670e-1245.71Ribosome biogenesis GTPase A (Fragment) n=1 Tax=An... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45782:SF4MITOCHONDRIAL GTPASE 1-RELATEDcoord: 2..68
NoneNo IPR availablePANTHERPTHR45782FAMILY NOT NAMEDcoord: 2..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig61317contigEcto-sp13_S_contig61317:570..779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig61317.16818.1mRNA_Ecto-sp13_S_contig61317.16818.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig61317 570..803 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig61317.16818.1 ID=prot_Ecto-sp13_S_contig61317.16818.1|Name=mRNA_Ecto-sp13_S_contig61317.16818.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp
MPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDS
AVPPDVLVGFMLRVVRSRRS
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