mRNA_Ecto-sp13_S_contig6128.16814.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6128.16814.1 vs. uniprot
Match: D7G8A0_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A0_ECTSI) HSP 1 Score: 1236 bits (3199), Expect = 0.000e+0 Identity = 822/966 (85.09%), Postives = 834/966 (86.34%), Query Frame = 1
Query: 1 QELKKRRLGCGGKKDALVARLVDHAASELESSTTSCVLVTPAPEKEDMKPSTRKRGEIPSSCRPALAVRAHAKEDDDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVKPAALPATAAAGAVSELETAGRAAGAGACSLSRPPVPKTDGDDHSTAXXXXXXXXXXXXS-----AKTXXXXXXXEVAGGTPGAADPVASVTDCSRIEGNGGVDETSEAVGTVVLSEGRGRKRPLDAVGEDAEDRGDTGEEEDGGVRGEDEEEPAWASLVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWSEEEQRADRANRTRRLERIKRRKLGDGGVSRRQRIASGRTTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLPLTPASALRRVFGHKAFREGQEWGVARAMGGQASLLVLATGTGKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRLASTPGALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRIPRKDGVKIGSWDRPNLDVRVLRSASDDDKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFITHHSLSHSKGLELVQVRGLMRSIMADAPQGILGETAKKIPSGPRGQYDDXXXXXXXXXXXAAGLQKALSVVDLESRLDVGGEVVETVLSVLEGEPYR----LLKLHAVMDDHLVVHFRKRRPSLLAEGEPAIGLLLALGTVEGLPSSGKGYSYGHGSAKISLVRLAEALGWAPTAVIRELRR 2871
+ELKKRRLGCGGKKD LVARLVDHAASELESSTTSCVLVTPAPEKE++KPSTRKR I SSCR ALAVRAHAK DDDSG XXXXXXXXXXXXXXXXXXXXXXXXXXXX EGVKPAA PATA AGAVSELET GRAAGAGAC LSR PVP+TDG+DHST XXXXXXXXXXX AK+ XXE GGTPGA DP + VTDCS IEGNGGVD TSEAVGTVVLSEGRGRKRPLDAVGEDAEDRGD E+E+GGVRGEDEEEPAWASLVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLPLTPASALRRVFGHKAFREGQEWGVARAMGGQASLLVLATGTGKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRLASTPGALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRIPRKDGVK+GSWDRPNLDVRVLRSASDDDKRS LSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDF+THHSLSHSKGLELVQVRGLMRSIMADAPQGILGETAKK PSGPR QYDD XXXXXX AAGL KALSVVDLESRLDVGGEVVETVLSVLEGEPYR LLKLHAVMDDHLVVHFRKRRPSLLAEGEPAIGLLLALGTVEGLPSSGKGYSYGHGSAKISLVRLAEALGWAPTAV+RELRR
Sbjct: 978 KELKKRRLGCGGKKDVLVARLVDHAASELESSTTSCVLVTPAPEKENVKPSTRKRDGISSSCRAALAVRAHAKRDDDSGGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSDFEFAFAEGVKPAAFPATAPAGAVSELET-GRAAGAGACFLSRLPVPETDGEDHSTTAXXXXXXXXXXXXXXXXXAKSGESDGXXEDTGGTPGAVDPASYVTDCSGIEGNGGVDGTSEAVGTVVLSEGRGRKRPLDAVGEDAEDRGDADEDEEGGVRGEDEEEPAWASLVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLPLTPASALRRVFGHKAFREGQEWGVARAMGGQASLLVLATGTGKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRLASTPGALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRIPRKDGVKVGSWDRPNLDVRVLRSASDDDKRSSLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGLELVQVRGLMRSIMADAPQGILGETAKKNPSGPRDQYDDDEXXXXXXGDEAAGLHKALSVVDLESRLDVGGEVVETVLSVLEGEPYRGLQWLLKLHAVMDDHLVVHFRKRRPSLLAEGEPAIGLLLALGTVEGLPSSGKGYSYGHGSAKISLVRLAEALGWAPTAVVRELRR 1871
BLAST of mRNA_Ecto-sp13_S_contig6128.16814.1 vs. uniprot
Match: A0A6H5JFV2_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV2_9PHAE) HSP 1 Score: 1140 bits (2949), Expect = 0.000e+0 Identity = 819/1064 (76.97%), Postives = 832/1064 (78.20%), Query Frame = 1
Query: 64 VDHAASELESSTTSCVLVTPAPEKEDMKPSTRKRGEIPSSCRPALAVRAHAKEDDDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVKPAALPATAAAGAVSELETAGRAAGAGACSLSRPPVPKTDGDDHSTAXXXXXXXXXXXXSAKTXXXXXXXEVAGGTPGAADPVASVTDCSRIEGNGGVDETSEAVGTVVLSEGRGRKRPLDAVGEDAEDRGDTGEEEDGGVRGEDEEEPAWASLVESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWSEEEQRAD-----------RANRTRRLERIKRRKLGDGGVSRRQRIASGRTTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLPLTPASALRRVFGHKAFREGQEWGVARAMGGQASLLVLATGTGKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRLASTPGALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRIPRKDGVKIGSWDRPNLDVRVLRSASDDDKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFITHHSLSHSKGLELVQVRGLMRSIMADAPQGILGETAKKIPSGPRGQYDDXXXXXXXXXXXAAGLQKALSVVDLESRLDVGGEVVETVLSVLEGEPYR---------------------------------------------------------------------------------------------------------------------LLKLHAVMDDHLVVHFRKRRPSLLAEGEPAIGLLLALGTVEGLPSSGKGYSYGHGSAKISLVRLAEALGWAPTAVIRELRR 2871
VDHAASELESSTTSCVLVTPAPEKE+MKPSTRKRGEI SSCRPALAVRA K+DDDSG XXXXXXXXXXXXXXXXXXXXXXXXXXX EGVKPAA PAT AAGAVSELETAGRAAGAGACSLSR PVP+T G+D ST XXXXX AK+XXXXXXXE AGGTPGA DP ASVTDCS IEGNGGVD TSEAVG VV SEGRGRKRPLDAVGEDAEDRGD GEE D GVRGEDEEEPAWASLVES XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLPLTPASALRRVFGHK FREGQEWGVARAMGGQASLLVLATG+GKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRLASTPGALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRIPRK GVK+GSWDRPNLDVRVLRSASDDDKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDF+THHSLSHSKG+ELVQVRGLMRSIMADAPQGILGETAKK PSGPR + DD AAG+QKALSVVDLESRLDVGGEVVETVLSVLEGEPYR LLKLHA M+DHLVVHFRKRRPSLLAEGEPAIGLLLALGTVEGLPSSGKGYSYGHGSAKISLVRLAEALGWAPTAV+RELRR
Sbjct: 1069 VDHAASELESSTTSCVLVTPAPEKENMKPSTRKRGEISSSCRPALAVRARGKKDDDSGGHSXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSDFEFAFAEGVKPAAFPATGAAGAVSELETAGRAAGAGACSLSRLPVPETAGEDRSTTAAEKGDGXXXXX-AKSXXXXXXXEDAGGTPGAVDPAASVTDCSGIEGNGGVDGTSEAVGPVVWSEGRGRKRPLDAVGEDAEDRGDAGEE-DRGVRGEDEEEPAWASLVESNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLPLTPASALRRVFGHKTFREGQEWGVARAMGGQASLLVLATGSGKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRLASTPGALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRIPRKHGVKVGSWDRPNLDVRVLRSASDDDKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFVTHHSLSHSKGMELVQVRGLMRSIMADAPQGILGETAKKKPSGPRDKCDDDKDNAAGGVYEAAGVQKALSVVDLESRLDVGGEVVETVLSVLEGEPYRGMLWSSGAAGNPVVVPSVDRCGRCEEVRRTLETARFAANGWVVLGVTKIYCGGCLQANTAPFPPASFPAVNXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXTAIVSIAAVSRLLKLHAEMEDHLVVHFRKRRPSLLAEGEPAIGLLLALGTVEGLPSSGKGYSYGHGSAKISLVRLAEALGWAPTAVVRELRR 2130
BLAST of mRNA_Ecto-sp13_S_contig6128.16814.1 vs. uniprot
Match: W7TAC7_9STRA (DNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAC7_9STRA) HSP 1 Score: 418 bits (1075), Expect = 4.480e-122 Identity = 248/545 (45.50%), Postives = 338/545 (62.02%), Query Frame = 1
Query: 1327 VFGHKAFREGQEWGVARAMGGQASLLVLATGTGKSLTYQLPALLLPG--ITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRLASTPG-----ALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLD-LLRPRGVLALTATASKAVVEDICTTLRIPRKDGVKIGSWDRPNLDVRVLRSASDDD-KRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMR-------GRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFITHHSLSHSKGLELVQVRGLMRSIMADAPQGILGETAKKIPS----GPRGQYDDXXXXXXXXXXXAAGLQKALSVVDLESRLDVGGEVVETVLSVLEGEPYRLLKLHAVMDDHLVVHFRKRRPSLLAEGEPAIGLLLALGTVEGLPSSGK--------GYSYGHGSAKISLVRLAEALG--WAPTAVIRELRR 2871
+FGHK FR GQ W + RA+ G+ SLL+L TG GKSL YQ+ A L P + VVVSPLVSLM DQ+A LPPQ+PGA L+G +RE+A +RDL++G++++LF+SPEKLCSPSFRRL PPV+L+C+DEAHC+SQWSHNFRP++LRLG ++ LLRPR +LA+TATA V++DIC+ L I GV W R NL +R+ D + KR + LL AP D+GSV+VYV +Q AE + L +G +AVAYH GM+ R AQ A+MR GR+RV VAT+AFGLGVD D+R V+H++MPKS+EN VQE GRAGRDG+ A C LL DF HSL+HS G+ ++Q+R + + +L + K P +G+ + + +Q A+ + + LD+ EV+ETV+ +LE P +LK H + D V FR+R+ ++L + E + +LL +G +PS+ G SYG GS SLVRLA A+G W P V++E+ R
Sbjct: 1013 IFGHKEFRPGQFWAIKRALAGERSLLMLPTGAGKSLCYQMAAALSPAGSLVVVVSPLVSLMVDQVARLPPQVPGACLAGDVS-MRELARIIRDLRSGQLRILFVSPEKLCSPSFRRLVENENDAVGRGFPPVALVCIDEAHCISQWSHNFRPAFLRLGHNIERLLRPRALLAMTATADPGVMKDICSRLSISSDAGVLAQPWRRHNLRLRIQLLDGDAELKRRHILNLLSNAPYDQGSVIVYVRQQKDAEILKDFLVSEGQSAVAYHAGMDMRHRDMAQGAWMRRRITGSGGRARVCVATIAFGLGVDKGDVRAVLHYEMPKSVENLVQETGRAGRDGKEAWCQTLLSQHDFRRQHSLAHSDGVSILQLRKFLEMFV------VLVQKTKATPDVDCISQQGRGGNANRHSA-----SRSVQVAVDIKSVSLALDMREEVLETVIVLLELPPLSILKYHGTVQDECQVVFRRRQANVLRKSEIIVDVLLNVG----VPSADLFERTNDTFGASYGFGSVSCSLVRLASAMGMDWRPHDVVKEMTR 1541
BLAST of mRNA_Ecto-sp13_S_contig6128.16814.1 vs. uniprot
Match: A0A835Z8Q0_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q0_9STRA) HSP 1 Score: 397 bits (1019), Expect = 3.600e-120 Identity = 252/539 (46.75%), Postives = 312/539 (57.88%), Query Frame = 1
Query: 1513 MANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRLASTPGALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRIPRKDGVKIGSWDRPNLDVRVLRSASDDDKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFITHHSLSHSKGLELVQVRGLMRSIMADAP---------------------------------QGILGETAKKIPSGPRGQYDDXXXXXXXXXXXAAGLQK----------------------------------------------------ALSVVDLESRLDVGGEVVETVLSVLEGEPYRLLKLHAVMDDHLVVHFRKRRPSLLAEGEPAIGLLLALGTVEGLPSSGKGYSYGHGSAKISLVRLAEALG-WAPTAVIRELRR 2871
+A LPPQLPGA LSG HGGL VA TVRDL+AGRVKVLF+SPE+LCS +F+RLA+ G LPPVSLLC+DEAHC+SQWSHNFRPSYLRL L R VLALTATAS+AVV ++C +L IP GV++GSW RPNL V V R A D KR L L+ + G+ +VYVWRQV+AE V LQ +GH+A AYH GM+AG R + Q AFMR R RV+VATVAFGLGVDM +R V+H+D P S+E YVQE+GRAGRDG A C LLL D DF HSL+HS ++ V GL+R++ AP Q + A P+ XXXXXXXXXXX G + AL + DLE++LD+ GEVVETVLS+LEG P+ L++LH VHFR+R+P LA P + +L G ++ S GY G GSA S++ +A A G W P+ V+REL++
Sbjct: 42 LARLPPQLPGACLSGRHGGLGAVARTVRDLRAGRVKVLFVSPERLCSAAFQRLAAARGVLPPVSLLCLDEAHCMSQWSHNFRPSYLRLRTEAAALNARCVLALTATASRAVVSELCASLSIPAC-GVRVGSWQRPNLRVAVQRVADDAAKRRVLRALMAQPAFGDGACIVYVWRQVSAEVVAEFLQSEGHSAAAYHAGMDAGERAKVQAAFMRRRVRVMVATVAFGLGVDMACVRAVIHYDAPSSLEGYVQEVGRAGRDGAPAHCRLLLSDADFAARHSLAHSNHMQRAHVLGLLRAVFGAAPAPAXXXXXXXXXRGAVEXXXXXXXXXPAVVPLRQAVAATVAT--PAXXXXXXXXXXXXXXXXXXXXXGTEAGAECGDAASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPVHELALCIRDLEAQLDMRGEVVETVLSLLEGPPHALIRLHGT------VHFRRRKPVALARAAPVVAAVLRCGALQ---ESSAGY--GCGSATASVLAVAHAAGGWMPSDVMRELQQ 566
BLAST of mRNA_Ecto-sp13_S_contig6128.16814.1 vs. uniprot
Match: A0A1Z5KAS2_FISSO (DNA helicase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAS2_FISSO) HSP 1 Score: 355 bits (912), Expect = 6.290e-102 Identity = 225/516 (43.60%), Postives = 306/516 (59.30%), Query Frame = 1
Query: 1312 SALRRVFGHKAFREGQEWGVARAMGGQASLLVLATGTGKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRL-ASTPGAL--------PPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRI--PRKD-------GVKIGSWDRPNLDVRVLRSASDDDKRSRLSRLLQEAP------------LDKGSVVVYVWRQVTAEAVCALLQGDG--HNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFITHHSLSHSKGLELVQVRGLMRSIMADAPQGILGETAKKIPSGPRGQYDDXXXXXXXXXXXAAGLQKALSVVDLESRLDVGGEVVETVLSVLEG-EPYRLLKLHAVMDDHLVVHFRKRRPSLLAEGEPAIGLLLALGTVEGLP 2760
SAL+ FG +FREGQEW + R + + S V TG GKSL Y LPA L+ G+ +VVSPLVSLMEDQ+ LPP++P A+LSGS A TV D+ GR+K++F+SPE+L SPSFRR+ T A+ P VSLLCVDEAHC+SQW+HNFRPSY+RL L++++P+ VLA+TATA VV+DIC TL I P +D V+I S DR N++V+ + +S +++ S+L +L P L GSV+VYVWRQ AEAV + G V YHGGM + AR R+Q+ FMRG++R+ VAT+AFGLG++ D+ GV+H + S E+YVQEIGRAGRDGR A+ L+ + + +SL+HS + QV GL++ + Q ++ K+ S PR L ++ + D DV E +ET+LS+LEG E RLL +H V+ D VV + S L E EP + L + T LP
Sbjct: 481 SALQNTFGFNSFREGQEWAIRRCLDHKRSCFVAPTGFGKSLCYTLPATLMDGVCIVVSPLVSLMEDQLRLLPPRIPAATLSGSLSASTMTA-TVDDILRGRIKIVFVSPERLTSPSFRRMFLPTWNAVENRFDRRFPDVSLLCVDEAHCMSQWAHNFRPSYMRLAMMLEIIQPKSVLAMTATAGPRVVDDICRTLSITAPNEDEGVDCSEAVQIMSSDRDNINVQSIFLSSQEERLSKLIDILSPVPKYEQRKSPLYGQLANGSVIVYVWRQRDAEAVAESIVSAGIEGGVVFYHGGMSSDARSRSQSKFMRGKARICVATIAFGLGINKADVAGVIHLYLSSSPEHYVQEIGRAGRDGRPAKAIALVLNDEVSVRNSLAHSDLISRSQVLGLLKIL-----QSLVLAAISKL-SKPRDT-----------------LNVSVPLQDTVLSTDVKSETIETILSLLEGREKGRLLFVHGVLYDKAVVSPNQMNLSPLGEKEPVVRTLQSCATCLELP 972
BLAST of mRNA_Ecto-sp13_S_contig6128.16814.1 vs. uniprot
Match: B7G345_PHATC (DNA helicase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G345_PHATC) HSP 1 Score: 348 bits (894), Expect = 2.460e-98 Identity = 227/575 (39.48%), Postives = 323/575 (56.17%), Query Frame = 1
Query: 1315 ALRRVFGHKAFREGQEWGVARAMGGQASLLVLATGTGKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRL---------ASTPGALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRIPRK------DGVKIGSWDRPNLDVRVLRSASDDDKRSRLSRLL-----------------QEAPLDKGSVVVYVWRQVTAEAVCALLQGDGHNA--VAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFITHHSLSHSKGLELVQVRGLMRSIMADAPQGILGETAKKIPSGPRGQYDDXXXXXXXXXXXAAGLQKALSVVDLESRLDVGGEVVETVLSVLE----GEPYRLLKLHAVMDDHLVVHFRKRRPSLLAEGEPAIGLLLALGTV----------------EGLPSSGKGYSYGHGSAKISLVRLAEALGWA--PTAVIRELRR 2871
AL+ +FGH +FRE QEW V R + + +LLV TG GKSL Y LPA L+ G+ +VVSPL+SL++DQ+ LPP+LP A++SG+ + +A T+ D+ GR+++LF+SPE+L S SFRRL PPVSLLCVDEAHC+SQW+HNFRPSYLRL +++++P VLA+TATA VV DIC TL I + +GV++ +R N+DVR L S ++ ++ ++L + L G+V+VYVWRQ+ A+AV LQ G V YHGGM+A AR +AQ+ FMRG++R+ VATVAFGLG++ D+ GV+H + S E+Y+QEIGRAGRDGRSA L+ + + + HSL+HS + QV+ L+ S++ + G K++ R D + GL +VV+ ++ E VET++S+LE G P LL++ V D V ++R LA E G +L + T + P K Y +GS S+ + A LG + P V LRR
Sbjct: 721 ALKAMFGHDSFRESQEWTVRRCLDKKRTLLVAPTGFGKSLCYALPASLMKGVCIVVSPLISLIQDQLRVLPPRLPAATMSGAVTSAK-LAATLDDIIRGRIRILFVSPERLTSASFRRLFRPIWNTDRREHERKFPPVSLLCVDEAHCLSQWAHNFRPSYLRLKSMVNMIQPESVLAITATAGPKVVTDICRTLNIDKNMSEEADNGVRVMKCNRDNIDVRCLLLTSQTERLKKVIKILTPKKKRTSNKSVAPEVSDDGCLATGNVIVYVWRQLDAQAVAENLQAAGIEGGIVIYHGGMDASARSKAQSKFMRGKARICVATVAFGLGINKEDVTGVIHMYLSASPEHYMQEIGRAGRDGRSAVAFALVLEDEILVRHSLAHSDLIAKSQVKALLSSLIGEVEDG------KRLLPADRSTADPI----------SVGLPLHKAVVECGAK----SETVETLVSLLEQRTSGVP--LLQIEGVFYDCAFVAPKRRSMKDLAVKESIAGAILRVATCTEPPAGEAVDLSIEREKAFPGCRKMVGYSYGSYAFSVAKCANLLGPSAEPRHVFAALRR 1272
BLAST of mRNA_Ecto-sp13_S_contig6128.16814.1 vs. uniprot
Match: A0A1Z5KKE5_FISSO (DNA helicase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKE5_FISSO) HSP 1 Score: 347 bits (889), Expect = 4.520e-98 Identity = 220/514 (42.80%), Postives = 305/514 (59.34%), Query Frame = 1
Query: 1312 SALRRVFGHKAFREGQEWGVARAMGGQASLLVLATGTGKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRL-ASTPGA--------LPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRI-------PRKDGVKIGSWDRPNLDVRVLRSASDDDKRSRLSRLL--------QEAPLD----KGSVVVYVWRQVTAEAVCALLQGDG--HNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFITHHSLSHSKGLELVQVRGLMRSIMADAPQGILGETAKKIPSGPRGQYDDXXXXXXXXXXXAAGLQKALSVVDLESRLDVGGEVVETVLSVLEGEPYR-LLKLHAVMDDHLVVHFRKRRPSLLAEGEPAIGLLLALGTVEGLP 2760
SAL+ FG +FREGQEW + R + + S V TG GKSL Y LPA L+ G+ +VVSPLVSLMEDQ+ LPP++P A+LSGS A TV D+ GR+K++F+SPE+L SPSFRR+ T A P VSLLCVDEAHC+SQW+HNFRPSY+RL L++++P+ VLA+TATA VV+DIC +L I + V I S DR N++V + +S +++ S+L +L +++PL+ GSV+VYVWRQ AEAV + G V YHGGM + AR R+Q+ FMRG++R+ VAT+AFGLG++ D+ GV+H + S E+YVQEIGRAGRDGR A+ L+ + + +SL+HS + Q+ GL++++ + +L T+K S PR L ++ + D D+ E +ET+LS+LEG R LL +H V D VV S L+E EP + L + T LP
Sbjct: 624 SALQNTFGFSSFREGQEWAIRRCLDKKKSCFVAPTGFGKSLCYTLPATLMDGVCIVVSPLVSLMEDQLRLLPPRIPAATLSGSLSASTMTA-TVDDIMRGRIKIVFVSPERLTSPSFRRMFLPTWNAAENRFDRRFPDVSLLCVDEAHCMSQWAHNFRPSYMRLATMLEIIQPKSVLAMTATAGPRVVDDICRSLSIIAPSEGVDLSEAVHIMSSDRDNINVESIFLSSQEERLSKLIDILSPVYKSEQRKSPLNGQLANGSVIVYVWRQRDAEAVAESIVTAGVEGGVVFYHGGMSSDARSRSQSKFMRGKARICVATIAFGLGINKADVAGVIHMYLSASPEHYVQEIGRAGRDGRPAKAIALVLNDEVSVRNSLAHSDLISKTQILGLLKTLQSL----VLAATSKL--SKPR-----------------ETLNVSVPLQDTVLSTDMKFETIETILSLLEGRAKRSLLLVHGVSYDKAVVSPNHMNLSRLSEKEPVVRSLRSCATCLELP 1113
BLAST of mRNA_Ecto-sp13_S_contig6128.16814.1 vs. uniprot
Match: W4G2T7_9STRA (DNA helicase n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2T7_9STRA) HSP 1 Score: 341 bits (874), Expect = 2.630e-97 Identity = 192/385 (49.87%), Postives = 249/385 (64.68%), Query Frame = 1
Query: 1288 SDLPLTPA--------SALRRVFGHKAFREGQEWGVARAMG--GQASLLVLATGTGKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLR-EVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRLASTPGALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRIPRKDGVKIGSWDRPNLDVRVLRSASDDDKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFITHHSLSHSKGLELVQVRGLMRSI 2406
SDLP P ALR VFGH F+ GQEW + R + SLLVL TG+GKSL YQLPAL LPG+T+V+SPL+SLM+DQ+ LPP L + S S + + A ++ L R+K+LF+SPE++ + F RL + VSL+C+DEAHCVS+WSHNFRP++LRLG+ R VLALTATAS AV DI L IP G+ S RPNLD+ V R DDD+ + L LL APL+KGSV+VYV Q A V ALL + + A AYH G+ + +++ Q F G+ RVVVAT+AFG+G+D ++RGVVHF MP S+E+YVQ IGRAGRDG+ A C +LL DF+ HSL+HS GL + Q L+R++
Sbjct: 415 SDLPPPPPIPRFVSALHALRVVFGHGDFKPGQEWAIHRLLNEPSSKSLLVLPTGSGKSLCYQLPALYLPGLTIVISPLISLMQDQLTKLPPPLQARAASFSSSRFKADQAAVIKALVENRLKLLFVSPERVVTAGFARLLARVH----VSLVCIDEAHCVSEWSHNFRPAFLRLGRVTR--RATNVLALTATASVAVTRDIVRILEIPTDRGIHRCSAYRPNLDLHVQRIQHDDDRYAALRTLLTTAPLNKGSVIVYVHTQYAAAQVAALLTTEANIKASAYHAGLSSDVKEKVQKGFASGKVRVVVATIAFGMGIDKANVRGVVHFHMPTSMEHYVQHIGRAGRDGKKASCAVLLLQSDFVRFHSLAHSDGLSMPQAHALVRTL 793
BLAST of mRNA_Ecto-sp13_S_contig6128.16814.1 vs. uniprot
Match: A0A485K974_9STRA (DNA helicase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K974_9STRA) HSP 1 Score: 337 bits (863), Expect = 4.500e-96 Identity = 203/443 (45.82%), Postives = 259/443 (58.47%), Query Frame = 1
Query: 1303 TPASALRRVFGHKAFREGQEWGVARAMGG----QASLLVLATGTGKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLR-EVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRLASTPGALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTLDLLRPRGVLALTATASKAVVEDICTTLRIPRKDGVKIGSWDRPNLDVRVLRSASDDDKRSRLSRLLQEAPLDKGSVVVYVWRQVTAEAVCALLQGDGH-NAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFITHHSLSHSKGLELVQVRGLMRSIMADAPQGILGETAKKIPSGPRGQYDDXXXXXXXXXXXAAGLQKALSVVDLESRLDVGGEVVETVLSVLE 2613
+P LR VFGH F+ GQEW V R + SLLVL TG+GKSL YQLPAL LPGIT+V+SPL+SLM+DQ+ LPP L + S S + + A V+ L AG +K+LF+SPE++ + F RL VSL+C+DEAHCVS+WSHNFRP++LRLG+ R VLALTATAS AV DI TL IP DG+ S R NL + V R A +DD+ L +LL PL KGSV+VYV Q A V LL D A AYH G+ + + + Q F G+ RVVVAT+AFG+G+D ++RGVVH+ MP S+E+YVQ IGRAGRDG+ A C LLL DF+ HSL+HS GL + QVR L + T + P + LE +LD+ VV+T+L+ LE
Sbjct: 389 SPLQTLRIVFGHPDFKAGQEWAVHRLLDDPLVPSTSLLVLPTGSGKSLCYQLPALYLPGITLVISPLISLMQDQLDKLPPVLQCRAASFSSSSFKSDQAVLVKSLLAGHIKLLFVSPERVVTAGFWRLLQRLH----VSLVCIDEAHCVSEWSHNFRPAFLRLGRVTQ--RATKVLALTATASVAVTHDIVRTLHIPSPDGIHRCSARRSNLQLHVQRLAHEDDRYDALRKLLLSPPLHKGSVIVYVHTQYAATQVAGLLTSDASIKASAYHAGLTSDIKDKVQKGFTAGKIRVVVATIAFGMGIDKANVRGVVHYHMPSSMEHYVQHIGRAGRDGKVATCVLLLVHSDFVRFHSLAHSDGLSMPQVRALGTLLFQSVTAASSSSTQPHSITYP--------------------------IAWLEDQLDMKNSVVDTILTTLE 799
BLAST of mRNA_Ecto-sp13_S_contig6128.16814.1 vs. uniprot
Match: A0A2R5GCC5_9STRA (DNA helicase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCC5_9STRA) HSP 1 Score: 341 bits (874), Expect = 6.320e-96 Identity = 230/549 (41.89%), Postives = 310/549 (56.47%), Query Frame = 1
Query: 1318 LRRVFGHKAFREGQEWGVARAMGGQASLLVLATGTGKSLTYQLPALLLPGITVVVSPLVSLMEDQMANLPPQLPGASLSGSHGGLREVAGTVRDLKAGRVKVLFLSPEKLCSPSFRRLASTPGALPPVSLLCVDEAHCVSQWSHNFRPSYLRLGQTL---------------DL--LRPRGVLALTATASKAVVEDICTTLRIPRKDGVKIGSWDRPNLDVRVLRSASDDDKR-SRLSRLL-------QEAPLDKG-------SVVVYVWRQVTAEAVCALLQGDGHNAVAYHGGMEAGARQRAQNAFMRGRSRVVVATVAFGLGVDMRDIRGVVHFDMPKSIENYVQEIGRAGRDGRSARCCLLLCDKDFITHHSLSHSKGLE-LVQVRGLMRSIMADAPQGILGETAKKIPSGPRGQYDDXXXXXXXXXXXAAGLQKALSVVDLESRLDVGGEVVETVLSVLEGEPYRLLKLHAVMDDHLVVHFRKRRPSLLAEGEPAIGLLLALGTVEGLPSSGKGYSYGHGSAKISLVRLAEALGWAPTAVIREL 2865
L VFG + FR Q W + R M G++SLLV TG+GKSL YQLPALLLPG+T+V+SPLV+LMEDQ+ +LP +PGA LS G RE+A ++ ++AGR+KVLF+SPE+L S SF+RL TPG LP +SL+CVDEAHC+S WSHNFRP++LRL + L DL LRPR VL LTATA+ VV DIC L + K G+K GSW R NL + SD + R +L LL + A + G SV+VYV + E V L+ G +A AYHG M R Q FM+G RVVVATVAFG+G+D +IRGVVH MP+SIE+YVQE+GRAGRDGR A C + + D + HSL+H++G++ + +R L+R+ LGE + Q AL + +L +LD+ V+ET++ L P RL++L L + S+L +PA + +E +SGK +L ++A+ G + + VIR L
Sbjct: 702 LEDVFGFEKFRGDQLWAIKRIMQGKSSLLVQGTGSGKSLCYQLPALLLPGLTLVISPLVALMEDQLKSLPMAIPGAILSHQQSG-REMARAIKMVQAGRIKVLFVSPERLFSSSFQRLVRTPGLLPEISLVCVDEAHCISSWSHNFRPAFLRLRELLARSGTGSSENDETRHDLACLRPRCVLGLTATATGKVVRDICGVLGVDAKSGLKAGSWLRENLHLEACIVPSDGEHRFKKLLTLLDGEGKPQKSAREESGARLAKPASVIVYVRTRNETELVAERLRSYGISARAYHGSMSGSDRSTVQTGFMKGSFRVVVATVAFGMGIDKANIRGVVHMGMPRSIEDYVQEVGRAGRDGREAVCVCMFDEADAMRLHSLAHAEGVDGRMPIRSLLRT---------LGERRSQ-------------------------RQIALRLDELALKLDMKEAVLETLIVHLSLPPLRLVQL-------LPSGYASCTISVLRSQDPASSNGVLKKALELADASGK----------CALAQVADVQGMSVSGVIRVL 1198 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6128.16814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6128.16814.1 >prot_Ecto-sp13_S_contig6128.16814.1 ID=prot_Ecto-sp13_S_contig6128.16814.1|Name=mRNA_Ecto-sp13_S_contig6128.16814.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=957bp QELKKRRLGCGGKKDALVARLVDHAASELESSTTSCVLVTPAPEKEDMKPback to top mRNA from alignment at Ecto-sp13_S_contig6128:731..8503+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6128.16814.1 ID=mRNA_Ecto-sp13_S_contig6128.16814.1|Name=mRNA_Ecto-sp13_S_contig6128.16814.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7773bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6128:731..8503+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6128:731..8503+ >mRNA_Ecto-sp13_S_contig6128.16814.1 ID=mRNA_Ecto-sp13_S_contig6128.16814.1|Name=mRNA_Ecto-sp13_S_contig6128.16814.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2871bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6128:731..8503+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |