prot_Ecto-sp13_S_contig6126.16812.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6126.16812.1
Unique Nameprot_Ecto-sp13_S_contig6126.16812.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length776
Homology
BLAST of mRNA_Ecto-sp13_S_contig6126.16812.1 vs. uniprot
Match: D7FIR1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR1_ECTSI)

HSP 1 Score: 788 bits (2036), Expect = 9.280e-275
Identity = 628/813 (77.24%), Postives = 646/813 (79.46%), Query Frame = 0
Query:    2 VQRSDRSPFGLQAKKDVDSSGLPIMTAAALRQARACPVAIDDEGYETPELNDRLYLHFK----VQHT---TSPAGLLLISLLLMAALPMPTSNQLRCLYLERNLISRIKGLKGLESLVQLDLSQXXXXXXXXXXXXXXXXXXXXXXXSLGDAAAVSPLSECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPILAETAHFRKTVITASPKLRY-------------------------------QEEKRNEDRRQMQVFRDWQAEMRQKKLAEIEARAAAGLGAPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTVGGGASSMSTATASETGDCNGGSDPNFSGTGRAGSHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHSXXXKDEHKXXXXXGKNTERDGXXXXXXXXXXXXXXXKEIRRVRVAQSLAMYRSQLAAERRLEEANLLRGHEEKTPRACVWSPPGSPSRHRGGGAVAGGFQRRLEEASAEVSAEAAASPQIVAATSGPRGCPAENTQQTQRHRGEQVPFPGATEGSGKCDPGGGVGGGWSGGRQWTASKDRALARLVRECEFDFDLVAARFSSAIAGGDGGGEEEAVTAQECRVRFARFDREEEDNTGDDMGGGGEAYNHNLVPDLDAIPAPGVIENAGLSFADLERKARNMKSRFLEPPKDLPSTRDADDRLHGDDDTKDGAADDVDDGRDLITKKKRTTTDILSSGDADGCAGKDYAIREDGARVGATKEPVLLVINDPGTATADGGRGNFERNRSGDSGSDGEDDEV 776
            ++  +++  G+QAKKDVDSSGLPIMTAAALRQARACPVAIDDEGYETPELNDRLYLHFK    +Q+    TS   L L                                              XXXXXXXXXXXXXXXXXXXXXXXSLGDAAAVSPLSECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPILAETAHFRKTVITASPKLRY                               QEEKRNEDRRQMQVFRDWQAEMRQKKLAEIEARAAAGLGAPEPTXXXXXXXXXXXXXXXXXXXXX            XXXX         PSTVGGG SS STATASET D +GGSDPNFSGTGRAGS GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXX     XXXXX        XXXXXXXXXXXXXXX  IRRVRVAQSLAMYRSQLAAERRLEEANL    EEKTP ACVWSPPGSPSRHRGGGAVAGGFQRRLEEASAEVSAEAAASPQIV ATSGPRG PAENTQQT+ HR EQVPFPGATEGSGKCDPGGGVGGG SGGRQWTAS+D ALARLVRECEF+FDLVAARFSS +A GDGG EEEA+TA+ECRVRFARFDREEEDN GDDMGGGGE YNHNLVPDLDAIPAPGVIENAGLSFADLERKARNMKSRFLEPPKDLPSTRD DDRL GDDD KDG ADD DDG  LIT KKRTTTDI  S DADGCAGKDYAIR+DGA+VGA KEPVLLVINDPGTA ADGGRGNFE NRSGDSGSDG+DDEV
Sbjct:   22 LRAREKARHGVQAKKDVDSSGLPIMTAAALRQARACPVAIDDEGYETPELNDRLYLHFKGYRKIQNLDPYTSLKALWLGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGDAAAVSPLSECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPILAETAHFRKTVITASPKLRYLDRPVFEAERVAAAAWTVGGAEAERNARTRYQEEKRNEDRRQMQVFRDWQAEMRQKKLAEIEARAAAGLGAPEPTXXXXXXXXXXXXXXXXXXXXXKRLIKESLAGAAXXXXEAEGPLPEPPSTVGGGTSSKSTATASETCD-SGGSDPNFSGTGRAGSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRRVRVAQSLAMYRSQLAAERRLEEANLHGAQEEKTPGACVWSPPGSPSRHRGGGAVAGGFQRRLEEASAEVSAEAAASPQIVTATSGPRGNPAENTQQTRCHRREQVPFPGATEGSGKCDPGGGVGGGRSGGRQWTASRDWALARLVRECEFEFDLVAARFSSCVASGDGG-EEEAITAEECRVRFARFDREEEDNAGDDMGGGGEGYNHNLVPDLDAIPAPGVIENAGLSFADLERKARNMKSRFLEPPKDLPSTRDGDDRLDGDDDAKDGDADDRDDGGVLITNKKRTTTDIPRSSDADGCAGKDYAIRDDGAQVGAKKEPVLLVINDPGTANADGGRGNFESNRSGDSGSDGDDDEV 832          
BLAST of mRNA_Ecto-sp13_S_contig6126.16812.1 vs. uniprot
Match: A0A6H5KFG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG8_9PHAE)

HSP 1 Score: 725 bits (1872), Expect = 7.070e-249
Identity = 548/840 (65.24%), Postives = 557/840 (66.31%), Query Frame = 0
Query:   14 AKKDVDSSGLPIMTAAALRQARACPVAIDDEGYETPELNDRLYLHFK-------VQHTTSPAGLLLISLLLMAALPMPTSNQLRCLYLERNLISRIKGLKGLESLVQLDLSQXXXXXXXXXXXXXXXXXXXXXXXSLGDAAAVSPLSECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------PILAETAHFRKTVITASPKLRYQEEKRNEDRRQMQVFRDWQAEMRQKKLAEIEARAAAGLGAPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------PSTVGGGASSMSTATASETGDCNGGSDPNFSGTGRAGSHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHSXXXKDEHKXXXXXGKNTERDGXXXXXXXXXXXXXXXKEIRRVRVAQSLAMYRSQLAAERRLEEANLLRGHEEKTPRACVWSPPGSPSRHRGGGAVAGGFQRRLEEASAEVSAEAAASPQIVAATSGPRGCPAENTQQTQRHRGEQVPFPGATEGSGKCDPGGGVGGGWSGGRQWTASKDRALARLVRECEFDFDLVAARFSSAIAGGDGGGEEEAVTAQECRVRFARFDREEEDNTGDDMGGGGEAYNHNLVPDLDAIPAPGVIENAGLSFADLERKARNMKSR-------------------------FLEPPKDLPSTRDADDRLHGDDDTKDGAADDVDDGRDLITK-KKRTTTDILSSGDADGCAGKDYAIREDGARVGATKEPVLLVINDPGTATADGGRGNFERNRSGDSGSDGEDDEV 776
            AKKDVDSSGLPIMTAAALRQ     VAIDDEGYETPELNDRLYLHFK       ++  TS   L L                                              XXXXXXXXXXXXXXXXXXXXXXX     AAVSPLSEC                                                 PILAETAHFRKTVITASPKLRYQEEKRNEDRRQMQVFRDWQAEMRQKKLAEIEARAAAGLG  EPT                                                                             PSTVGGGASSMST+T SETGDCNGGSDPNFSGTGRAGS G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXX     XXXXXGK  + DG   XXXXXXXXXXXX  IRRVRVAQSLAMYRSQLAAERRLEE NL  GH+EKTP  C WSP GSPSRHRGGGAVAGGFQRRLEEASAEVSAEAAASPQIV ATSGPRG PAENTQQ QRHRGEQVPFPGATEGSG CDPGGGVGGGWSGGRQWTASKDRALARLVR CEFDFDLVAARFSSAIA GD  GEEEAVTA+ECRVRFARFDREEE N GDDMGGG E YNHN VPDLDAIPAPGVIENAGLSFADLERKARNMKSR                         FLEPPKDLPSTRD DDRL GDD           DGRDLIT  KKRTTT+I  S DADGCA KDYAIR+DGARVGATKEPVLLVINDPGTA ADGGRGNF+ NRS DSGSDGEDDEV
Sbjct:   65 AKKDVDSSGLPIMTAAALRQ-----VAIDDEGYETPELNDRLYLHFKGYRKIQNLEPYTSLKALWLGGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVSPLSECPSLTNLDVTGNRLAGPGVLDVSVSEMYAYTHIKVLSALKGLVSLSLSGNPILAETAHFRKTVITASPKLRYQEEKRNEDRRQMQVFRDWQAEMRQKKLAEIEARAAAGLGPLEPTPEEVLREAEREGKAKADAEEDKRLIKEVGLCGIADAFYAAEGNKNNNASHGSRRDVIEFLAGAAASSAGAEGPLPEPPSTVGGGASSMSTSTTSETGDCNGGSDPNFSGTGRAGSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKLPKTDGEEKXXXXXXXXXXXX--IRRVRVAQSLAMYRSQLAAERRLEERNLYGGHKEKTPGTCAWSPHGSPSRHRGGGAVAGGFQRRLEEASAEVSAEAAASPQIVTATSGPRGNPAENTQQPQRHRGEQVPFPGATEGSGMCDPGGGVGGGWSGGRQWTASKDRALARLVRGCEFDFDLVAARFSSAIASGDRCGEEEAVTAEECRVRFARFDREEEGNAGDDMGGGSEGYNHNAVPDLDAIPAPGVIENAGLSFADLERKARNMKSRYNSILISPDWPFLPQTVAGRFGLARFLEPPKDLPSTRDGDDRLDGDDXXXXXXXXXXXDGRDLITNNKKRTTTNIPRSSDADGCARKDYAIRDDGARVGATKEPVLLVINDPGTANADGGRGNFDSNRSSDSGSDGEDDEV 897          
BLAST of mRNA_Ecto-sp13_S_contig6126.16812.1 vs. uniprot
Match: A0A7S1TQF8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQF8_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.170e-11
Identity = 93/263 (35.36%), Postives = 117/263 (44.49%), Query Frame = 0
Query:   26 MTAAALRQARACPVAIDDEGYETPELNDRLYLHFK-------VQHTTSPAGLLLISLLLMAALPMPTSNQLRCLYLERNLISRIKGLKGLESLVQLDLSQXXXXXXXXXXXXXXXXXXXXXXXSLGDAAAVSPLSECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPILAETAHFRKTVITASPKLRY-------------------------------QEEKRNEDRRQMQVFRDWQAEMRQKKLAEIEARAAAG 250
            M  A + +       I+++GYETPELND LYLH++       ++  T    + L S  L     +     LRCLY  +NLI     +  + SL  LDLS         XXXXXXXXXXXXXX +L  A A++PL  C    XXXXXXXX                        P++  T  FRK +I   PKLRY                               QE KRNE R  +Q FRDWQ +MR K+ AE +A    G
Sbjct:    1 MALATMTKEEVLKACIENDGYETPELNDVLYLHYRGFPKVANLEAYTGCKAIYLESNGLSCLEGLAHMEMLRCLYASKNLIDHCFDVSAITSLATLDLSHNRIESLEGXXXXXXXXXXXXXXNALSTAEAIAPLEACVMLKXXXXXXXXLDGKEVMEGFARLTQIHAMSLNGNPLVRSTPQFRKNMICNLPKLRYLDRPIFDMEQNAALAWREGGPEAERKAKRDMQEAKRNEQRESLQRFRDWQKDMRAKREAERKAAIDRG 263          
BLAST of mRNA_Ecto-sp13_S_contig6126.16812.1 vs. uniprot
Match: A0A836CBU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.050e-6
Identity = 92/268 (34.33%), Postives = 108/268 (40.30%), Query Frame = 0
Query:   22 GLPIMTAAALRQARACPVAIDDEGYETPELNDRLYLHFK-------VQHTTSPAGLLLISLLLMAALPMPTSNQLRCLYLERNLISRIKGLKGLESLVQLDLSQXXXXXXXXXXXXXXXXXXXXXXXSLGDAAAVSPLSECXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPILAETAHFRKTVITASPKLRY-------------------------------QEEKRNEDRRQMQVFRDWQAEMRQKKLAEIEARAAAGL 251
            GLP+MT  A+RQA     A++D GYETPELNDRLYLHFK       ++  T+   L L S                                            XXXXXXXXXXXXXXXXXXXXXXX   D+  +  L  C                                    P +A+T HFRKT+IT  P LRY                               Q  +R  DR Q+  FR WQA+ R+KK  EI AR AAGL
Sbjct:   33 GLPVMTPDAIRQA-----ALEDNGYETPELNDRLYLHFKGYRRIENLEPYTAVKALWLGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDSQGIDHLQRCRALTNLDVTANTLAGAGILSVLQAIPCLVALSANGNPFIADTPHFRKTLITTMPALRYLDRPIFEGERVAATAWARGGAEAETAARADFQAAQRQRDRDQLSEFRTWQADQRRKKQEEIAARRAAGL 295          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6126.16812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FIR1_ECTSI9.280e-27577.24Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KFG8_9PHAE7.070e-24965.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1TQF8_9STRA1.170e-1135.36Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A836CBU5_9STRA1.050e-634.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 396..416
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 86..107
e-value: 160.0
score: 5.8
coord: 108..129
e-value: 9.3
score: 15.2
coord: 180..196
e-value: 210.0
score: 4.7
NoneNo IPR availablePANTHERPTHR45973FAMILY NOT NAMEDcoord: 25..519
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 84..776
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..63
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 85..215
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 155..173
e-value: 0.37
score: 11.0
coord: 131..148
e-value: 0.77
score: 10.0
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 110..131
score: 7.312
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 88..109
score: 7.843
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 157..178
score: 5.825
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 132..153
score: 6.742
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 82..227
e-value: 5.3E-29
score: 102.4
IPR027734Dynein assembly factor 1, axonemalPANTHERPTHR45973:SF9DYNEIN ASSEMBLY FACTOR 1, AXONEMALcoord: 25..519

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6126contigEcto-sp13_S_contig6126:14..8487 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6126.16812.1mRNA_Ecto-sp13_S_contig6126.16812.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6126 14..8487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6126.16812.1 ID=prot_Ecto-sp13_S_contig6126.16812.1|Name=mRNA_Ecto-sp13_S_contig6126.16812.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=776bp
MVQRSDRSPFGLQAKKDVDSSGLPIMTAAALRQARACPVAIDDEGYETPE
LNDRLYLHFKVQHTTSPAGLLLISLLLMAALPMPTSNQLRCLYLERNLIS
RIKGLKGLESLVQLDLSQNRIEAALGLSCLPSLHTLNLSKNSLGDAAAVS
PLSECPSLTNLDVTGNRLAGPGVLDVLSSLKGLVSLSLSGNPILAETAHF
RKTVITASPKLRYQEEKRNEDRRQMQVFRDWQAEMRQKKLAEIEARAAAG
LGAPEPTPEEVLREADREAEAKADAEEDKRLIKESLAGAAASSAGSEGPL
SGPPSTVGGGASSMSTATASETGDCNGGSDPNFSGTGRAGSHGGDDGGGD
RRSDSSFDDEEERKGGREDDERRKDHSDDDKDEHKEDREEGKNTERDGEE
EEEEEEEEDEEDEKEIRRVRVAQSLAMYRSQLAAERRLEEANLLRGHEEK
TPRACVWSPPGSPSRHRGGGAVAGGFQRRLEEASAEVSAEAAASPQIVAA
TSGPRGCPAENTQQTQRHRGEQVPFPGATEGSGKCDPGGGVGGGWSGGRQ
WTASKDRALARLVRECEFDFDLVAARFSSAIAGGDGGGEEEAVTAQECRV
RFARFDREEEDNTGDDMGGGGEAYNHNLVPDLDAIPAPGVIENAGLSFAD
LERKARNMKSRFLEPPKDLPSTRDADDRLHGDDDTKDGAADDVDDGRDLI
TKKKRTTTDILSSGDADGCAGKDYAIREDGARVGATKEPVLLVINDPGTA
TADGGRGNFERNRSGDSGSDGEDDEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR027734DNAAF1