mRNA_Ecto-sp13_S_contig1197.1681.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1197.1681.1 vs. uniprot
Match: D8LD21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD21_ECTSI) HSP 1 Score: 485 bits (1248), Expect = 2.760e-167 Identity = 269/328 (82.01%), Postives = 272/328 (82.93%), Query Frame = 1
Query: 1 MTQPAVAHGGDNTRRDAPHWTHTYDKWDGWQDPDELAKKREEDEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLAHFLGRALRAEPNNVKALYRRAVVYRLRDRFKEASADLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGKEQGRDQDNARGSSNNNGRALQQXXXXXXXXXXXXXXXEAAEDYPYQCFAPAPAGXXNESGGSYAVTAAVGPAXXXXXEEEEGRRWHDLVS 984
M QPAVAHGGDN RRDAPHWTHTYDKWDGW+DPDELAKKREE+EKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQA LRAEPNNVKALYRRAVVYRLRDRFKEAS DLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGKEQG DQDN RGSSN NG+A QQ XXXXXXXX PYQCFA XX PA EEEEGRRWHDLVS
Sbjct: 1 MAQPAVAHGGDNARRDAPHWTHTYDKWDGWEDPDELAKKREEEEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQA------------LRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGKEQGPDQDNVRGSSNYNGQASQQESETQEKXXXXXXXXXXXXXDPYQCFAXXXXXXXXXXXXXXXXXXXXVPAGSGRGEEEEGRRWHDLVS 316
BLAST of mRNA_Ecto-sp13_S_contig1197.1681.1 vs. uniprot
Match: A0A6H5KB41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB41_9PHAE) HSP 1 Score: 390 bits (1001), Expect = 6.890e-131 Identity = 215/263 (81.75%), Postives = 220/263 (83.65%), Query Frame = 1
Query: 202 MEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLAHFLGRA--LRAEPNNVKALYRRAVVYRLRDRFKEASADLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGKEQGRDQDNARGSSNNNGRALQQXXXXXXXXXXXXXXXEAAEDYPYQCFAPAPAGXXNESGGSYAVTAAVGPAXXXXXEEEEGRRWHDLVS 984
ME+PIEEKISACRDFRQ GNLFHAEGQ G+ ALIYYDFCFPD+DSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCC LAHFLGRA LRAEPNNVKALYRRAVVYRLRDRFKEAS DLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGE IFGKEQGRDQDNARGSS NNGRALQQ EAAED PYQCFAPA A NESGG YAVTAAV PA +EE GRRWHDL+S
Sbjct: 1 MEVPIEEKISACRDFRQGGNLFHAEGQ---GSA----ALIYYDFCFPDDDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCPLAHFLGRARALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEHIFGKEQGRDQDNARGSSGNNGRALQQESETQEKDGSEPSAVEAAEDDPYQCFAPAAAVGGNESGGGYAVTAAVVPAGSGSGKEE-GRRWHDLIS 255
BLAST of mRNA_Ecto-sp13_S_contig1197.1681.1 vs. uniprot
Match: A0A836CM33_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM33_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.900e-45 Identity = 99/225 (44.00%), Postives = 136/225 (60.44%), Query Frame = 1
Query: 58 WTHTYDKWDGWQDPDELAKKREED-EKRAKSYRENHMA--CAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLAHFLGRALRAEPNNVKALYRRAVVYRLRDRFKEASADLGKALA----QRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFG 711
WT TY WD W+DP++ A+ +++ EK ++ R ++ C+HD SAE+++M++ EK++AC FR +GN F EGQY+R LQYRQALIY D+ FPD Q LDD+R ACLLNSAACF+ GEL + L+ C QA L+ P KALYRRA VYRL+D F A ADL A + + LR E +L+++ Y +A+G Q+FG
Sbjct: 21 WTRTYSYWDRWEDPEQGARPAKDNAEKTDRAARSQALSGCCSHDHSAEKRIMDLSEPEKVAACEAFRAKGNAFFEEGQYQRATLQYRQALIYCDYAFPDAGELQTRLDDVRLACLLNSAACFVRAGELGEALEACEQA------------LQERPRCAKALYRRAQVYRLKDEFALAKADLAAAXXXXXPRAADAAALRHERMMLRARETCYGANARALGRQMFG 233
BLAST of mRNA_Ecto-sp13_S_contig1197.1681.1 vs. uniprot
Match: A0A7S2HHR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHR7_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.040e-42 Identity = 96/218 (44.04%), Postives = 138/218 (63.30%), Query Frame = 1
Query: 58 WTHTYDKWDGWQDPDELAKKREEDEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQEL-DDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLAHFLGRALRAEPNNVKALYRRAVVYRLRDRFKEASADLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIF 708
W+ Y ++DG+ D +E A+ E++ ++A + R +C+HD S ER+V E+P+++KI A F RGN+ EGQY + QY+ A++YY++ FPDE S + ++ + IR C LNSAAC + G D+ L+ CYQ LR EP NVKALYRRA +YR+RD+F EA ADL A + PN+V LR+E L +KI SYR +R+AM + IF
Sbjct: 9 WSQKYREFDGFIDHEEQAQIEEQERQKATAQRPG-TSCSHDHSRERQVYELPLDKKIEAMDRFHLRGNILFDEGQYEMASEQYKSAMVYYEYTFPDEGSDEWDVVNRIRLVCNLNSAACNMKAGLYDEALNNCYQV------------LREEPLNVKALYRRAQMYRIRDQFSEAKADLLLAWRELPNDVQLRQEYLTLSNKIKSYRRKREAMAKHIF 213
BLAST of mRNA_Ecto-sp13_S_contig1197.1681.1 vs. uniprot
Match: A0A662XSD5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSD5_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.080e-41 Identity = 89/225 (39.56%), Postives = 138/225 (61.33%), Query Frame = 1
Query: 58 WTHTYDKWDGWQDPDELAKKREEDEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLAHFLGRALRAEPNNVKALYRRAVVYRLRDRFKEASADLGKALAQR-------PNEVMLRKESAVLKSKIASYRERRKAMGEQIFG 711
WT TY+KWD W+DP+ELA++ + +R++ + M C HD SAE+K+M+M +EK++AC +FR GNLF GQY+R A Y +AL+Y+++ FPD + + + D ++ LLN AAC L LD + H +AL+ +P+NVKALYRRA YRL+D F+ AS D+ +AL ++ +L +E A+L++K+ +Y+ R K + +FG
Sbjct: 98 WTRTYEKWDAWEDPEELARQEQAARERSERAAKAQMGCNHDHSAEQKLMDMSTQEKLTACDEFRVLGNLFFRHGQYQRAAYNYHKALVYFEYVFPDTEEEDIQADALKLKLLLNFAACRLKTLHLDDAI------------HHANQALQLDPDNVKALYRRAQAYRLKDEFELASQDISRALELSGTSENAPTSDPLLVQEKALLQAKMLAYKLRTKQVSTAMFG 310
BLAST of mRNA_Ecto-sp13_S_contig1197.1681.1 vs. uniprot
Match: K3WFS9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFS9_GLOUD) HSP 1 Score: 159 bits (403), Expect = 7.400e-41 Identity = 86/221 (38.91%), Postives = 135/221 (61.09%), Query Frame = 1
Query: 58 WTHTYDKWDGWQDPDELAKKREEDEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLAHFLGRALRAEPNNVKALYRRAVVYRLRDRFKEASADLGKAL----AQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIF 708
WT TY+KWD W+DP+ELA++ +E +R++ + C HD SAE+K+M+M +EK+ AC +FRQ GNLF GQY+R A Y +AL+Y+++ FPD D++ + D ++ LLN AAC L G L+ + +AL + NVKALYRRA +RLRD F A D+ +A+ A+ ++ +L +E A+L++K+ +Y+ + K + +F
Sbjct: 59 WTKTYEKWDAWEDPEELARQEQEARERSERVAREQLGCNHDHSAEQKLMDMMTQEKLDACDEFRQLGNLFFQHGQYQRAAYHYHKALVYFEYIFPDTDAETEHHDALKLKVLLNFAACRLKTGHLEDVVQ------------HADQALALDVANVKALYRRAQAHRLRDDFDRAMQDINRAIEIAQAEDASDPLLVQEKALLQAKMLAYKLKSKQVSSAMF 267
BLAST of mRNA_Ecto-sp13_S_contig1197.1681.1 vs. uniprot
Match: A0A024UUC7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUC7_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.190e-38 Identity = 92/220 (41.82%), Postives = 133/220 (60.45%), Query Frame = 1
Query: 58 WTHTYDKWDGWQDPDELAKKREEDEKRAKSYREN-HMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLAHFLGRALRAEPNNVKALYRRAVVYRLRDRFKEASADLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFGK 714
WT Y++W W+DPDELA K E R KS R N +C HD SAE+K+M+M K+ C FR+ GN F A GQY+R A + AL+Y+++ F D D++Q E+DD+++ LLN A C + +DQ + AS AL+ + ++VKALY RA+ YR++D+F+ A ADL +ALA P + L +E VL +K A+Y + K +G +FGK
Sbjct: 60 WTREYERWSAWEDPDELAAK--EHAAREKSERANARTSCNHDHSAEQKLMDMSTRVKLDKCDTFRRLGNRFFAHGQYQRAAYHFHHALVYFEYIFADTDAEQDEMDDLKKRTLLNFALCRIKTKHVDQAV---LHASL---------ALKLDEDSVKALYIRAMGYRMQDKFELAQADLDRALALAPQDAALIQEKHVLVAKRAAYAVKSKQLGVAMFGK 265
BLAST of mRNA_Ecto-sp13_S_contig1197.1681.1 vs. uniprot
Match: D0NSG6_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NSG6_PHYIT) HSP 1 Score: 153 bits (386), Expect = 1.390e-38 Identity = 86/234 (36.75%), Postives = 137/234 (58.55%), Query Frame = 1
Query: 31 DNTRRDAPHWTHTYDKWDGWQDPDELAKKREEDEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLAHFLGRALRAEPNNVKALYRRAVVYRLRDRFKEASADLGKALA------QRPN-EVMLRKESAVLKSKIASYRERRKAMGEQIFG 711
+ +++ +WT TY+KWD W+DP++LA++ +E +R++ + M C HD SAE+K+M+M +EK +AC + R GNLF GQY+R A Y +AL+Y+++ FPD D ++ + D ++ LLN AAC L LD + H +AL NNVKALYRRA RL+D F A D+ +A+ P+ + +L +E +L++K+ +Y+ R K + +FG
Sbjct: 33 ETEQKNGYNWTRTYEKWDAWEDPEDLARQEQEARERSERAAKAQMGCNHDHSAEQKLMDMTTQEKTTACDELRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFPDTDEEEAQADALKLKLLLNFAACRLKTLHLDDAV------------HHANQALEINTNNVKALYRRAQANRLKDEFHLAQKDIERAIKLSNATEDTPSIDSLLLQEKKLLQAKMLAYKLRTKQVSAAMFG 254
BLAST of mRNA_Ecto-sp13_S_contig1197.1681.1 vs. uniprot
Match: A0A6G0XP24_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP24_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.030e-38 Identity = 87/218 (39.91%), Postives = 132/218 (60.55%), Query Frame = 1
Query: 58 WTHTYDKWDGWQDPDELAKKREEDEKRAKSYR-ENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLAHFLGRALRAEPNNVKALYRRAVVYRLRDRFKEASADLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIF 708
WT Y+KW W+DP+ELA K E E R KS R + +C HD SAE+K+M+M ++K+ C FR+ GN F A GQY+R A Y +ALIY+++ F D D +Q ++DD+++ LLN A C + D+++ H AL+ + ++VKALY RA+ YR++D+F A DL +AL+ P++ L E +L +K A+YR + K +G +F
Sbjct: 60 WTRNYEKWQAWEDPEELAAK--EKELRDKSERAQMRTSCNHDHSAEQKLMDMSTQDKLIKCDAFRRLGNRFFAHGQYQRAAYHYHRALIYFEYVFCDTDDEQHQMDDLKKRALLNFALCRIKTKHTDESI------------HHATLALKLDADSVKALYIRAMGYRMQDKFDLAQGDLDRALSLAPDDAALIHEKHILTAKKAAYRVKSKQLGAAMF 263
BLAST of mRNA_Ecto-sp13_S_contig1197.1681.1 vs. uniprot
Match: A0A2D4CGS1_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGS1_PYTIN) HSP 1 Score: 151 bits (381), Expect = 3.080e-38 Identity = 89/232 (38.36%), Postives = 132/232 (56.90%), Query Frame = 1
Query: 1 MTQPAVAHGGDNTRRDAPHWTHTYDKWDGWQDPDELAKK----REEDEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCLLAHFLGRALRAEPNNVKALYRRAVVYRLRDRFKEASADLGKALA---QRPNEVMLRKESAVLKSKIASYR 675
MT A +G R D WT Y+KWD W+DP+ELA++ RE+ A++ + C HD S E+++M+M EK++AC +FR+ GNLF +GQY+R A Y +AL+Y+++ FPD D + + D +R LLN AAC L G LD L +ALR +P N KAL+RRA +RLRD F A+ DL ALA + + +E +L++++ +Y+
Sbjct: 50 MTATATPNGSAVARSD---WTSVYEKWDAWEDPEELAQREQAAREKXXXAARAAAQG--PCNHDHSTEQRLMDMTTTEKLTACDEFRRLGNLFFEQGQYQRAAYHYHKALVYFEYVFPDTDDENEAFDSLRLKTLLNFAACRLHTGHLDDVLS------------HTEQALRLDPTNAKALFRRAQAWRLRDEFARATEDLNAALAVAGAAADRAAILQEKTLLQARVLAYK 264 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1197.1681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1197.1681.1 >prot_Ecto-sp13_S_contig1197.1681.1 ID=prot_Ecto-sp13_S_contig1197.1681.1|Name=mRNA_Ecto-sp13_S_contig1197.1681.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp MTQPAVAHGGDNTRRDAPHWTHTYDKWDGWQDPDELAKKREEDEKRAKSYback to top mRNA from alignment at Ecto-sp13_S_contig1197:3479..12037+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1197.1681.1 ID=mRNA_Ecto-sp13_S_contig1197.1681.1|Name=mRNA_Ecto-sp13_S_contig1197.1681.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8559bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1197:3479..12037+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1197:3479..12037+ >mRNA_Ecto-sp13_S_contig1197.1681.1 ID=mRNA_Ecto-sp13_S_contig1197.1681.1|Name=mRNA_Ecto-sp13_S_contig1197.1681.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1134bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1197:3479..12037+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |