prot_Ecto-sp13_S_contig6123.16809.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6123.16809.1
Unique Nameprot_Ecto-sp13_S_contig6123.16809.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length257
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6123.16809.1 vs. uniprot
Match: D8LMI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMI1_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 8.450e-91
Identity = 136/153 (88.89%), Postives = 142/153 (92.81%), Query Frame = 0 
Query:    1 MIEPVTMIVDTPLWKVMAGVTNPSGTREQEQRRLRGCWLQAAVRHANITAKITNGLMASLKSSDDNLRGLEQQGPPFLPLHVAASQGMTDAGRVVLERARNRQSSQLNDAVNMPDATLGCTPLHWAAMMNRVDFMLFLLDHGADVDSRDFAGR 153
            MIEPVTMIVDTP+W V AGV NP+GT EQEQ+RLRGCWLQAA RHANITAKITN L+  L+SSDDNLRGLEQQGPPFLPLHVAASQGMTDAGRVVLERARN QSSQLND VNMPDATLGCTPLHWAAM+NRVDFML LLDHGADVDSRDFAGR
Sbjct:    1 MIEPVTMIVDTPVWGVTAGVMNPTGTHEQEQQRLRGCWLQAAARHANITAKITNALVIRLESSDDNLRGLEQQGPPFLPLHVAASQGMTDAGRVVLERARNHQSSQLNDVVNMPDATLGCTPLHWAAMLNRVDFMLLLLDHGADVDSRDFAGR 153
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BLAST of mRNA_Ecto-sp13_S_contig6123.16809.1 vs. uniprot
Match: A0A6H5KCU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU4_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.330e-20
Identity = 47/60 (78.33%), Postives = 50/60 (83.33%), Query Frame = 0 
Query:    1 MIEPVTMIVDTPLWKVMAGVTNPSGTRE--QEQRRLRGCWLQAAVRHANITAKITNGLMA 58
            MIEPVTMIVDTP W V AGV NPSGT E  QEQ+R R CWLQAA RHAN+TAKITNGL+A
Sbjct:    1 MIEPVTMIVDTPAWGVTAGVMNPSGTHEHEQEQQRHRRCWLQAAARHANVTAKITNGLVA 60
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6123.16809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMI1_ECTSI8.450e-9188.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCU4_9PHAE2.330e-2078.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 184..213
e-value: 3.7E-5
score: 33.1
coord: 217..246
e-value: 430.0
score: 7.7
coord: 151..180
e-value: 17.0
score: 14.4
coord: 118..147
e-value: 4.8E-6
score: 36.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 151..183
score: 9.511
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 184..216
score: 12.796
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 118..150
score: 13.25
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 44..156
e-value: 4.6E-15
score: 57.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 157..248
e-value: 8.5E-24
score: 85.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 45..242
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 78..149
e-value: 2.9E-8
score: 34.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 79..237
score: 38.594
NoneNo IPR availablePFAMPF13637Ank_4coord: 152..204
e-value: 6.3E-10
score: 39.4
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 48..190
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 179..239
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 48..190
coord: 179..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6123contigEcto-sp13_S_contig6123:630..2545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6123.16809.1mRNA_Ecto-sp13_S_contig6123.16809.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6123 48..2545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6123.16809.1 ID=prot_Ecto-sp13_S_contig6123.16809.1|Name=mRNA_Ecto-sp13_S_contig6123.16809.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=257bp
MIEPVTMIVDTPLWKVMAGVTNPSGTREQEQRRLRGCWLQAAVRHANITA
KITNGLMASLKSSDDNLRGLEQQGPPFLPLHVAASQGMTDAGRVVLERAR
NRQSSQLNDAVNMPDATLGCTPLHWAAMMNRVDFMLFLLDHGADVDSRDF
AGRTPLFSCAAFGGVEAAALLLGRNADENAKDSRGLTPLHAAAAGGHLEV
ADELISAGADVRRQAFVGSMPRHVAEREGHASMVELLANAARSFERGGFF
ESVSET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom