prot_Ecto-sp13_S_contig61200.16804.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig61200.16804.1
Unique Nameprot_Ecto-sp13_S_contig61200.16804.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
BLAST of mRNA_Ecto-sp13_S_contig61200.16804.1 vs. uniprot
Match: D7G1R3_ECTSI (Putative nuclear LIM interactor-interacting protein, C terminal part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R3_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 7.920e-29
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
Query:    1 MVDNSLDAIRYHLENGVHISSFYGDREDTDLLSTLDALKTLAPAADVRDGIIR 53
            MVDNSLDAIRYHLENGVHISSFYGDREDT+LLSTLDALKTLAPAADVRDGIIR
Sbjct:   17 MVDNSLDAIRYHLENGVHISSFYGDREDTELLSTLDALKTLAPAADVRDGIIR 69          
BLAST of mRNA_Ecto-sp13_S_contig61200.16804.1 vs. uniprot
Match: A0A6H5JQQ2_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ2_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.740e-25
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
Query:    1 MVDNSLDAIRYHLENGVHISSFYGDREDTDLLSTLDALKTLAPAADVRDGIIR 53
            MVDNSLDAIRYHLENGVHISSFYGDREDTDLLSTLDALKTLAPAADVRD IIR
Sbjct:  369 MVDNSLDAIRYHLENGVHISSFYGDREDTDLLSTLDALKTLAPAADVRDAIIR 421          
BLAST of mRNA_Ecto-sp13_S_contig61200.16804.1 vs. uniprot
Match: A0A1Y2C401_9FUNG (FCP1 homology domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2C401_9FUNG)

HSP 1 Score: 52.4 bits (124), Expect = 2.420e-6
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 MVDNSLDAIRYHLENGVHISSFYGDREDTDLLSTLDALKTLAPAADVR 48
            ++DNS+ A  Y LENG+ I+S+Y DR D +LL  L+ L+TL  A DVR
Sbjct:  187 IIDNSIYAFGYQLENGIPITSWYSDRNDRELLCVLEFLQTLIGAYDVR 234          
BLAST of mRNA_Ecto-sp13_S_contig61200.16804.1 vs. uniprot
Match: A0A1Y2CGJ0_9FUNG (FCP1 homology domain-containing protein n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2CGJ0_9FUNG)

HSP 1 Score: 51.6 bits (122), Expect = 4.590e-6
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 MVDNSLDAIRYHLENGVHISSFYGDREDTDLLSTLDALKTLAPAADVR 48
            ++DNS+ A  Y LENG+ I+S+Y D+ D +LL  L+ L+TL  A DVR
Sbjct:  192 IIDNSIYAFGYQLENGIPITSWYSDKNDKELLCVLEFLQTLIEANDVR 239          
BLAST of mRNA_Ecto-sp13_S_contig61200.16804.1 vs. uniprot
Match: A0A1R2ALP1_9CILI (FCP1 homology domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2ALP1_9CILI)

HSP 1 Score: 50.8 bits (120), Expect = 8.440e-6
Identity = 22/51 (43.14%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    1 MVDNSLDAIRYHLENGVHISSFYGDREDTDLLSTLDALKTLAPAADVRDGI 51
            +VDN+L +  + L+NG+ ISS+YGD+ D +L   ++ LK +  A DVRD +
Sbjct:  230 LVDNTLLSFAFQLDNGIPISSWYGDKNDNELFKLINFLKIIKEAPDVRDQL 280          
BLAST of mRNA_Ecto-sp13_S_contig61200.16804.1 vs. uniprot
Match: A0A1Y1XNT3_9FUNG (FCP1 homology domain-containing protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XNT3_9FUNG)

HSP 1 Score: 50.8 bits (120), Expect = 9.070e-6
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 MVDNSLDAIRYHLENGVHISSFYGDREDTDLLSTLDALKTLAPAADVR 48
            ++DNS+ A  Y LENG+ I+S+Y D+ D +LL  L+ L+TL  A DVR
Sbjct:  345 IIDNSIYAFGYQLENGIPITSWYSDKNDKELLCILEFLQTLIGAYDVR 392          
BLAST of mRNA_Ecto-sp13_S_contig61200.16804.1 vs. uniprot
Match: L8GNS5_ACACA (NLI interacting factor (NIF) family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GNS5_ACACA)

HSP 1 Score: 49.3 bits (116), Expect = 2.540e-5
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 MVDNSLDAIRYHLENGVHISSFYGDREDTDLLSTLDALKTLAPAADVR 48
            +VDNS  A  YHL+NG+ I S++G+R D  LL+ +  L+ LA A DVR
Sbjct:  167 IVDNSPLAFAYHLDNGIPIESWFGERSDNHLLALMPFLRELARADDVR 214          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig61200.16804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G1R3_ECTSI7.920e-2998.11Putative nuclear LIM interactor-interacting protei... [more]
A0A6H5JQQ2_9PHAE1.740e-2598.11FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
A0A1Y2C401_9FUNG2.420e-652.08FCP1 homology domain-containing protein n=1 Tax=Ne... [more]
A0A1Y2CGJ0_9FUNG4.590e-650.00FCP1 homology domain-containing protein n=1 Tax=Ne... [more]
A0A1R2ALP1_9CILI8.440e-643.14FCP1 homology domain-containing protein n=1 Tax=St... [more]
A0A1Y1XNT3_9FUNG9.070e-650.00FCP1 homology domain-containing protein n=1 Tax=An... [more]
L8GNS5_ACACA2.540e-550.00NLI interacting factor (NIF) family protein n=1 Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 1..56
e-value: 9.7E-11
score: 43.3
IPR004274FCP1 homology domainPFAMPF03031NIFcoord: 1..48
e-value: 1.0E-8
score: 35.1
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 1..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig61200contigEcto-sp13_S_contig61200:29..214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig61200.16804.1mRNA_Ecto-sp13_S_contig61200.16804.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig61200 20..214 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig61200.16804.1 ID=prot_Ecto-sp13_S_contig61200.16804.1|Name=mRNA_Ecto-sp13_S_contig61200.16804.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
MVDNSLDAIRYHLENGVHISSFYGDREDTDLLSTLDALKTLAPAADVRDG
IIRYVCPPRVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR004274FCP1_dom
IPR036412HAD-like_sf